Gene Details:
- Gene ID: AT4G21540
- Gene Symbol: SPHK1
- Gene Name: sphingosine kinase 1
- Description: sphingosine kinase 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Literature:
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Analyses of synteny between Arabidopsis thaliana and species in the Asteraceae reveal a complex network of small syntenic segments and major chromosomal rearrangements. DOI: 10.1534/genetics.105.049205 ; PMID: 16783026
- A leucine-rich repeat protein is required for growth promotion and enhanced seed production mediated by the endophytic fungus Piriformospora indica in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03028.x ; PMID: 17397506
- Involvement of sphingosine kinase in plant cell signalling. DOI: 10.1111/j.1365-313X.2008.03579.x ; PMID: 18557834
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
- Phytosphingosine-phosphate is a signal for AtMPK6 activation and Arabidopsis response to chilling. DOI: 10.1111/j.1469-8137.2011.04017.x ; PMID: 22236066
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Sphingosine kinase AtSPHK1 functions in fumonisin B1-triggered cell death in Arabidopsis. DOI: 10.1016/j.plaphy.2017.08.008 ; PMID: 28846870
- Arabidopsis sphingosine kinase and the effects of phytosphingosine-1-phosphate on stomatal aperture. DOI: 10.1104/pp.104.055806 ; PMID: 15665242
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Systematic analysis of protein subcellular localization and interaction using high-throughput transient transformation of Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2008.03596.x ; PMID: 18643979
Sequences:
cDNA Sequence
- >AT4G21540.3
TAAGAAATTAAACATCTTCCAATGGTGAGTCTGTTTTTTGTGCTTACCAGATTAATGGTTGTGAACTGTCTCAGCATATTATTCCAATTTTAGAGCTCCGAAGCAGAGAGACTACAGAAAAGTCTAGTTCACTTTCTTAAATTAGTTAATACGGTGTCGTATTGGGACACTCTTCTTTAATTTTCTCTCTGGCCTAAGAGAAATCGACACGTCATAGCTAAGAGGAGGGGTATTGCCACGTCATCTCATCCACTCGCCAGGCTAGGCGCGTGAATTGCATTTCCCTCCTGATCGGAAAAGTCTTACCAAAGATTAGCTTTCAGGTCAATTTTTAAATCTTAGCTCTCACCAACGACGAAACTCGTCTCCCTCCATCTTGCTATGGATCGTCAGCCGGAGAGGGAGAATGATGAACTACCATCTCCGGCGATAATTTCCGACCGAGTTCTGGTAAATGGTGTTGTCACGCCGTTAACGTTGACCGCCGAGGGAGAGCTACGATCGACGGAATCTGGACGGCGGAAATCGACGTTGGCAAAAGAAATCCTGAGTTTCGTCGTGGAAGGTAACAAGGTTAGAGTAAAGACCTTGGTTGAGAAAGGAGGAGGAATTTGCTGTAGAGGAAGTGCTGGAGATTATGCGAGGAACGATTTCGTTTTCGAGCCTCTCTCTGATGAATCTAGAAAGCTTTGGTCCGATAAGTTCCATCAACACCTCGTCTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAATCCGTTTGGCGGGAAGAAAACAGCGAGAAAGATATTTCAAGAGGAAGTAAAGCCATTGTTTGAAGATGCAAATATTCAACTTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAATTGTTAGGTCCATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGTGACGGTATCCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGAAGACTGGAAGACTGCCATAAAATTGCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAATCATTGTTGGAACCGGTAGGGCTTCCTTGTAGTGCAACAAGTGCTACTATTTCGATAATCCGAGGTCGTACACGTTCTCTAGATGTAGCAACTATCTCACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCTTGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAATTCAGATGGATGGGTAGTGCTCGCTTTGATATCTATGGTCTTCAGAGGATAATATGCTTAAGACAATACCATGGACGAATTCTATTTGTGCCAGCTCCTGGGTTCGAAAGCTATGGGCAACGAGCCAGTTGCAGTATAGATAAAGAGCCATCTGGTAGTGATAAGACACTCGTATACCAAGGACCTGATAGTAAACTTGAAAATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTCATAATGTTCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGACGCTAAGACTGTCCTAAACTAGCCTTGCTATCACTTATGACAAAGTTGAGTGATGGAACCCATGTCCAATCACCATATGCATCATATCTGAAGGTGAAGGCATTCGTACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCATAGATTCAGATGGAGAAGTTTTGGCAAGAGGAAGAAAATCGTACAAATGTGATCAAAAGGCTTTGATGTCTTACGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCACTCTCTTCTCTCCTGAATAATTCTGACTGATACATGAGATGTGATGAGATGAGATGAAGTTGTCCCTTGTGGCTATAATTTGATTGATGGACATTACAATACAAAAAATGAGAAGATGATTCGAGTTATATAGTAAATCCCTAAAGATTACCATTGAGTGTATTGTTTATTGTTGTATTGCTGTTGTATTGCAGTTTTGAGTTTTTTGTTAGAAAGTTGTGTGAACTAAGATATTGAGAAGACCATAAATACTAAATGTGAGATTTTTTTGAACTCTTGGTGTAAAGTGTAAACATATTTATGTTGGGGGATGGT - >AT4G21540.1
TAAGAAATTAAACATCTTCCAATGGTGAGTCTGTTTTTTGTGCTTACCAGATTAATGGTTGTGAACTGTCTCAGCATATTATTCCAATTTTAGAGCTCCGAAGCAGAGAGACTACAGAAAAGTCTAGTTCACTTTCTTAAATTAGTTAATACGGTGTCGTATTGGGACACTCTTCTTTAATTTTCTCTCTGGCCTAAGAGAAATCGACACGTCATAGCTAAGAGGAGGGGTATTGCCACGTCATCTCATCCACTCGCCAGGCTAGGCGCGTGAATTGCATTTCCCTCCTGATCGGAAAAGTCTTACCAAAGATTAGCTTTCAGGTCAATTTTTAAATCTTAGCTCTCACCAACGACGAAACTCGTCTCCCTCCATCTTGCTATGGATCGTCAGCCGGAGAGGGAGAATGATGAACTACCATCTCCGGCGATAATTTCCGACCGAGTTCTGGTAAATGGTGTTGTCACGCCGTTAACGTTGACCGCCGAGGGAGAGCTACGATCGACGGAATCTGGACGGCGGAAATCGACGTTGGCAAAAGAAATCCTGAGTTTCGTCGTGGAAGGTAACAAGGTTAGAGTAAAGACCTTGGTTGAGAAAGGAGGAGGAATTTGCTGTAGAGGAAGTGCTGGAGATTATGCGAGGAACGATTTCGTTTTCGAGCCTCTCTCTGATGAATCTAGAAAGCTTTGGTCCGATAAGTTCCATCAACACCTCGTCTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAATCCGTTTGGCGGGAAGAAAACAGCGAGAAAGATATTTCAAGAGGAAGTAAAGCCATTGTTTGAAGATGCAAATATTCAACTTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAATTGTTAGGTCCATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGTGACGGTATCCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGAAGACTGGAAGACTGCCATAAAATTGCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAATCATTGTTGGAACCGGTAGGGCTTCCTTGTAGTGCAACAAGTGCTACTATTTCGATAATCCGAGGTCGTACACGTTCTCTAGATGTAGCAACTATCTCACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCTTGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAATTCAGATGGATGGGTAGTGCTCGCTTTGATATCTATGGTCTTCAGAGGATAATATGCTTAAGACAATACCATGGACGAATTCTATTTGTGCCAGCTCCTGGGTTCGAAAGCTATGGGCAACGAGCCAGTTGCAGTATAGATAAAGAGCCATCTGGTAGTGATAAGACACTCGTATACCAAGGACCTGATAGTAAACTTGAAAATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTCATAATGTTCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGACGCTAAGACTGTCCTAAACTAGCCTTGCTATCACTTATGACAAAGTTGAGTGATGGAACCCATGTCCAATCACCATATGCATCATATCTGAAGGTGAAGGCATTCGTACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCATAGATTCAGATGGAGAAGTTTTGGCAAGAGGAAGAAAATCGTACAAATGTGATCAAAAGGCTTTGATGTCTTACGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCACTCTCTTCTCTCCTGAATAATTCTGACTGATACATGAGATGTGATGAGATGAGATGAAGTTGTCCCTTGTGGCTATAATTTGATTGATGGACATTACAATACAAAAAATGAGAAGATGATTCGAGTTATATAGTAAATCCCTAAAGATTACCATTGAGTGTATTGTTTATTGTTGTATTGCTGTTGTATTGCAGTTTTGAGTTTTTTGTTAGAAAGTTGTGTGAACTAAGATATTGAGAAGACCATAAATACTAAATGTGAGATTTTTTTGAACTCTTGGTGTAAAGTGTAAACATATTTATGTTGGGGGATGGT - >AT4G21540.2
TAAGAAATTAAACATCTTCCAATGGTGAGTCTGTTTTTTGTGCTTACCAGATTAATGGTTGTGAACTGTCTCAGCATATTATTCCAATTTTAGAGCTCCGAAGCAGAGAGACTACAGAAAAGTCTAGTTCACTTTCTTAAATTAGTTAATACGGTGTCGTATTGGGACACTCTTCTTTAATTTTCTCTCTGGCCTAAGAGAAATCGACACGTCATAGCTAAGAGGAGGGGTATTGCCACGTCATCTCATCCACTCGCCAGGCTAGGCGCGTGAATTGCATTTCCCTCCTGATCGGAAAAGTCTTACCAAAGATTAGCTTTCAGGTCAATTTTTAAATCTTAGCTCTCACCAACGACGAAACTCGTCTCCCTCCATCTTGCTATGGATCGTCAGCCGGAGAGGGAGAATGATGAACTACCATCTCCGGCGATAATTTCCGACCGAGTTCTGGTAAATGGTGTTGTCACGCCGTTAACGTTGACCGCCGAGGGAGAGCTACGATCGACGGAATCTGGACGGCGGAAATCGACGTTGGCAAAAGAAATCCTGAGTTTCGTCGTGGAAGGTAACAAGGTTAGAGTAAAGACCTTGGTTGAGAAAGGAGGAGGAATTTGCTGTAGAGGAAGTGCTGGAGATTATGCGAGGAACGATTTCGTTTTCGAGCCTCTCTCTGATGAATCTAGAAAGCTTTGGTCCGATAAGTTCCATCAACACCTCGTCTCTCTCGGTCGGCCAAAGAAATTGCTTGTGTTTGTGAATCCGTTTGGCGGGAAGAAAACAGCGAGAAAGATATTTCAAGAGGAAGTAAAGCCATTGTTTGAAGATGCAAATATTCAACTTGAGATTCAAGAAACCAAGTATCAGTTGCATGCAAAGGAAATTGTTAGGTCCATGGATGTATCAAAATACGATGGTATTGTTTGTGTTAGCGGTGACGGTATCCTTGTTGAGGTTGTAAATGGACTGCTTGAAAGAGAAGACTGGAAGACTGCCATAAAATTGCCGATCGGAATGGTCCCTGCAGGAAGTGGTAATGGCATGATTAAATCATTGTTGGAACCGGTAGGGCTTCCTTGTAGTGCAACAAGTGCTACTATTTCGATAATCCGAGGTCGTACACGTTCTCTAGATGTAGCAACTATCTCACAAGGGACTACCAAATTCTTCAGTGTCTTGATGCTTGCTTGGGGTTTAGTGGCTGATATAGACATCGAGTCAGAGAAATTCAGATGGATGGGTAGTGCTCGCTTTGATATCTATGGTCTTCAGAGGATAATATGCTTAAGACAATACCATGGACGAATTCTATTTGTGCCAGCTCCTGGGTTCGAAAGCTATGGGCAACGAGCCAGTTGCAGTATAGATAAAGAGCCATCTGGTAGTGATAAGACACTCGTATACCAAGGACCTGATAGTAAACTTGAAAATCTGGATTGGAGAGAAATGAAAGGCCCATTTGTTTCAGTATGGCTTCATAATGTTCCCTGGGGTGCTGAGAACACTTTGGCTGCTCCTGACGCTAAGACTGTCCTAAACTAGCCTTGCTATCACTTATGACAAAGTTGAGTGATGGAACCCATGTCCAATCACCATATGCATCATATCTGAAGGTGAAGGCATTCGTACTGGAGCCAGGTGCACGCATAGACGAACCAGACAAGGAAGGAATCATAGATTCAGATGGAGAAGTTTTGGCAAGAGGAAGAAAATCGTACAAATGTGATCAAAAGGCTTTGATGTCTTACGACAAGCTTCAAATAAGTGTTGATCAAGGTTTAGCCACTCTCTTCTCTCCTGAATAATTCTGACTGATACATGAGATGTGATGAGATGAGATGAAGTTGTCCCTTGTGGCTATAATTTGATTGATGGACATTACAATACAAAAAATGAGAAGATGATTCGAGTTATATAGTAAATCCCTAAAGATTACCATTGAGTGTATTGTTTATTGTTGTATTGCTGTTGTATTGCAGTTTTGAGTTTTTTGTTAGAAAGTTGTGTGAACTAAGATATTGAGAAGACCATAAATACTAAATGTGAGATTTTTTTGAACTCTTGGTGTAAAGTGTAAACATATTTATGTTGGGGGATGGT
CDS Sequence
Protein Sequence