Information report for AT4G20870
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional association of cell death suppressor, Arabidopsis Bax inhibitor-1, with fatty acid 2-hydroxylation through cytochrome b₅. DOI: 10.1111/j.1365-313X.2008.03765.x ; PMID: 19054355
- Arabidopsis sphingolipid fatty acid 2-hydroxylases (AtFAH1 and AtFAH2) are functionally differentiated in fatty acid 2-hydroxylation and stress responses. DOI: 10.1104/pp.112.199547 ; PMID: 22635113
- Plant sphingolipid fatty acid 2-hydroxylases have unique characters unlike their animal and fungus counterparts. DOI: 10.4161/psb.21825 ; PMID: 22918503
- Arabidopsis mutants of sphingolipid fatty acid α-hydroxylases accumulate ceramides and salicylates. DOI: 10.1111/j.1469-8137.2012.04351.x ; PMID: 23025549
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- "Salicylic Acid Mutant Collection" as a Tool to Explore the Role of Salicylic Acid in Regulation of Plant Growth under a Changing Environment. DOI: 10.3390/ijms20246365 ; PMID: 31861218
- Sphingolipid-Induced Programmed Cell Death is a Salicylic Acid and EDS1-Dependent Phenotype in Arabidopsis Fatty Acid Hydroxylase (Fah1, Fah2) and Ceramide Synthase (Loh2) Triple Mutants. DOI: 10.1093/pcp/pcab174 ; PMID: 34910213
- Sphingolipids with 2-hydroxy fatty acids aid in plasma membrane nanodomain organization and oxidative burst. DOI: 10.1093/plphys/kiac134 ; PMID: 35312013
Gene Resources
- UniProt: A0A178V550
- EMBL: CACRSJ010000109, LUHQ01000004
- AlphaFoldDB: A0A178V550
- EnsemblPlants: AT4G20870.1, AT4G20870.2
- Gramene: AT4G20870.1, AT4G20870.2
- KEGG: ath:AT4G20870
- Orthologous matrix: HDYPNDA
- ExpressionAtlas: AT4G20870
- InterPro: IPR006694, IPR014430
- PANTHER: PTHR12863, PTHR12863:SF13
- SWISS-MODEL: A0A178V550
Sequences
cDNA Sequence
- >AT4G20870.1
AACAAAAAAAAAAAGGTAGGAAACGTGGGCCGAACATTATCAGAAGGATTCAAGCGAAGCAAAATCCCACCCTTTCTTCTGTGACAGAGTGTCTGTATTTGTTGTTTCCCTTCAATTGGAGAGAGTAAGCGAGTCTCTTACGCCCAGAGAGAGAGAGAGAGAGAGGCTTGTTTGTTTTCTCTCCTCTAAGAAACAATCAGTCTCATAAAGTGGCAAAGATGGTTGCAGAACGATACACAGTCGATTTGAATAAGCCACTTGTGTTTCAGGTTGGTCATCTTGGCGAAGAATATCAGGAATGGATTCATCAACCTATTGTATGCGTTGAGGGTCCTCGTTTTTTCGAAAGTGATTTTTGGGAGTTTTTGACTCGCACGGTTTGGTGGGCAATCCCAACAATCTGGCTTCCAGTTGTTTGCTACGTTCTTTCAATATCGGCGAGTAAGGGACTTACGTTTCCCCAGATCGGTTTAATAGTTGCTTTTGGTGTACTCACGTGGACACTGCTCGAGTACACGCTTCATCGCTTCCTTTTCCACATCCAAACCAAGAGTTACTGGGCAAACACTGCACACTATCTTCTTCATGGATGCCATCACAAGCACCCACAAGACGGCCTTCGTCTTGTTTTCCCTCCTACAGCAACAGCTATTCTCTTGGTTCCACTATGGAAGCTTCTCCATCTCCTAGCTACTCCTGCTACAGCACCTGCTATTCTTGGAGGCATATTGTTTGGCTATGTGATGTATGATATTACCCATTACTATCTACACCATGGTCAACCTAAAGAACCAACCTTTAAACATCTTAAGAAATACCACCTGAATCATCACTTTAGGATTCAGGACAAAGGATATGGAATCACTTCCTCTCTATGGGACAAAGTCTTTGGAACACTTCCCGGTATTAAAGCCGCTGCGAAGAAGAGCTAAATCGGATTTCTGTTTGCCATTTTTCAGAGTGTCGAAAAACTCACTGATATTGTGTATTCTAAATTCATCAGGTGATTCAATGACTGTTTAACTACTTCTGTATACGATCTATTCACCATATTTGAACATATTTTTAGTGGTTTAATATCATTCAGAATTTGGTCTTTGAA - >AT4G20870.2
AACAAAAAAAAAAAGGTAGGAAACGTGGGCCGAACATTATCAGAAGGATTCAAGCGAAGCAAAATCCCACCCTTTCTTCTGTGACAGAGTGTCTGTATTTGTTGTTTCCCTTCAATTGGAGAGAGTAAGCGAGTCTCTTACGCCCAGAGAGAGAGAGAGAGAGAGGCTTGTTTGTTTTCTCTCCTCTAAGAAACAATCAGTCTCATAAAGTGGCAAAGATGGTTGCAGAACGATACACAGTCGATTTGAATAAGCCACTTGTGTTTCAGGTTGGTCATCTTGGCGAAGAATATCAGGAATGGATTCATCAACCTATTGTATGCGTTGAGGGTCCTCGTTTTTTCGAAAGTGATTTTTGGGAGTTTTTGACTCGCACGGTTTGGTGGGCAATCCCAACAATCTGGCTTCCAGTTGTTTGCTACGTTCTTTCAATATCGGCGAGTAAGGGACTTACGTTTCCCCAGATCGGTTTAATAGTTGCTTTTGGTGTACTCACGTGGACACTGCTCGAGTACACGCTTCATCGCTTCCTTTTCCACATCCAAACCAAGAGTTACTGGGCAAACACTGCACACTATCTTCTTCATGGATGCCATCACAAGCACCCACAAGACGGCCTTCGTCTTGTTTTCCCTCCTACAGCAACAGCTATTCTCTTGGTTCCACTATGGAAGCTTCTCCATCTCCTAGCTACTCCTGCTACAGCACCTGCTATTCTTGGAGGCATATTGTTTGGCTATGTGATGTATGATATTACCCATTACTATCTACACCATGGTCAACCTAAAGAACCAACCTTTAAACATCTTAAGAAATACCACCTGAATCATCACTTTAGGATTCAGGACAAAGGATATGGAATCACTTCCTCTCTATGGGACAAAGTCTTTGGAACACTTCCCGGTATTAAAGCCGCTGCGAAGAAGAGCTAAATCGGATTTCTGTTTGCCATTTTTCAGAGTGTCGAAAAACTCACTGATATTGTGTATTCTAAATTCATCAGGTGATTCAATGACTGTTTAACTACTTCTGTATACGATCTATTCACCATATTTGAACATATTTTTAGTGGTTTAATATCATTCAGAATTTGGTCTTTGAA
CDS Sequence
Protein Sequence