Information report for AT4G20850
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- root , pollen tube cell , pollen , guard cell
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. DOI: 10.1371/journal.pcbi.0010040 ; PMID: 16193095
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- Cross genome comparisons of serine proteases in Arabidopsis and rice. DOI: 10.1186/1471-2164-7-200 ; PMID: 16895613
- Exploiting the wild crucifer Thlaspi arvense to identify conserved and novel genes expressed during a plant's response to cold stress. DOI: 10.1007/s11103-006-9080-4 ; PMID: 16972165
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Diversity of serine hydrolase activities of unchallenged and botrytis-infected Arabidopsis thaliana. DOI: 10.1074/mcp.M800494-MCP200 ; PMID: 19136719
- Selective inhibition of plant serine hydrolases by agrochemicals revealed by competitive ABPP. DOI: 10.1016/j.bmc.2011.06.040 ; PMID: 21764588
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Identification of multiple salicylic acid-binding proteins using two high throughput screens. DOI: 10.3389/fpls.2014.00777 ; PMID: 25628632
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UVT6
- EMBL: LUHQ01000004
- EnsemblPlants: AT4G20850.1
- Gramene: AT4G20850.1
- KEGG: ath:AT4G20850
- Orthologous matrix: SLRDFQC
- ExpressionAtlas: AT4G20850
- InterPro: IPR000209, IPR015500, IPR022229
- PANTHER: PTHR43806, PTHR43806:SF14
- SUPFAM: SSF52743
- PROSITE: PS00137, PS00138, PS51892
- Gene3D: 1.25.40.710, 2.60.40.3170, 3.40.50.200
- SWISS-MODEL: A0A178UVT6
- Conserved Domain Database: cd04857
Sequences
cDNA Sequence
- >AT4G20850.1
TCTAAATAATATCGTTATCTAGATAGAGCAAGCGAAAGCCACCAGTTGGAGTAAGCCACCACCAACTCCATTGACACAACAATTCACAACCCAAAAGACCTCTAACGAGTGACACGATTCGGTGCATCGACTCAGCTGTTATTTGACCAAAATACCCCTGTTAATTAACACACATCCCGAAGATGGATCTGAGTCTGCAGCTGCAGATTCACGGCGCGTTAATCAACAAAGGCCCGTCGTGTACTTCTTATTGGGCTTCTTCTTCTTCACTTTCTCTTCCTCGCGATTTCATTTCTTCTTCTACGTTTCTTCTTCATCGAAGACTCAGAAGAAGAAGCTGCTCTCGTTCTCGTGGAATCCGATTAAGACGGAGTGGTTTCTCGGCGATGCCTTGTTCTTCTTCTGATACTCTTACGGCTTCTCGCGTCGGTTGTGGCGGAGGAGGTGGTGGTGGAGCCGTTGGCGGTGGAGCTGAGAATGCTTCTGTCGCTAATTTCAAGCTGAACGAATCTACCTTTATTGCTTCTCTCATGCCTAAGAAAGAAATCCGTGCGGATTGCTTCATCGAAGCTCATCCTGAGTACGACGGTCGTGGCGTTGTTATAGCTATCTTTGATTCTGGTTTTGATCCTTCTGCTGCTGGCTTGCATGTAACTTCTGATGGAAAACCCAAGGTTTTGGACGTCATTGACTGCACTGGAAGTGGAGATATAGATACATCCACAGTGGTGAAAGCCAATGAAGATGGTCATATTCGTGGAGCATCAGGGGCAACTTTGGTTGTCAATTCTTCATGGAAAAATCCCACTGGAGAGTGGCGTGTAGGTTCCAAGTTGGTTTATCAGTTATTTACAGATGACTTGACTTCTCGTGTGAAGAAAGAGAGAAGGAAATCCTGGGATGAAAAGAATCAGGAGGAAATTGCCAAGGCTGTAAATAATCTGTATGATTTCGATCAGAAGCACAGCAAGGTGGAAGATGCGAAATTGAAGAAAACTCGTGAAGACCTCCAAAGCAAAGTTGATTTTCTGAAAAAACAAGCTGATAAATATGAAGACAAAGGGCCTGTTATTGATGCTGTTGTGTGGCATGATGGAGAAGTATGGAGGGTTGCACTTGATACACAGAGTCTGGAAGAGGATCCAGATAGCGGGAAACTAGCAGACTTCTCCCCACTGACTAACTACCGAATTGAACGGAAGTATGGCGTGTTTAGCCGACTAGATGCATGCTCCTTTGTTGCTAACGTGTATGATGAGGGAAAGGTTCTAAGCATTGTAACTGATAGTTCTCCTCACGGCACTCATGTTGCTGGAATAGCTACTGCACACCACCCTGAGGAGCATTTGTTAAATGGTGTGGCACCTGGTGCACAAATAATATCTTGCAAAATTGGAGACTCGCGATTAGGTTCAATGGAGACCGGAACTGGATTGACTCGGGCATTGATAGCTGCCCTAGAGCATAACTGTGATCTTGTCAACATGAGCTATGGAGAGCCAGCATTACTTCCAGACTATGGGCGCTTTGTTGATCTTGTTACTGAAGCTGTGAACAAGAGACGTCTAATTTTTGTAAGTAGTGCTGGCAACAGTGGTCCAGCTTTGACAACAGTCGGAGCACCGGGTGGAACAACGTCCAGTATCATTGGGGTTGGTGCGTATGTTTCTCCTGCAATGGCAGCAGGTGCCCATTCAGTGGTGGAACCTCCCAGTGAGGGGCTTGAATACACTTGGTCAAGCCGGGGGCCAACATCTGATGGAGATCTTGGTGTCTGCATAAGTGCACCTGGTGGGGCTGTTGCTCCTGTTCCTACATGGACGCTTCAAAGACGCATGCTCATGAATGGAACATCAATGGCATCTCCTTCTGCCTGTGGGGCAATTGCGTTACTTCTAAGTGCTATGAAGGCTGAGGGCATCCCAGTTAGCCCGTACAGTGTGAGAAGGGCCCTTGAAAATACATCTACACCAGTAGGTGATCTACCTGAAGATAAACTAACTACTGGACAAGGGCTTATGCAAGTTGATAAGGCATATGAATACTTAAAACAGTTTCAGGACTATCCATGCGTATTTTATCAGATAAAGGTCAATCTCTCCGGTAAAACAATTCCAACATCACGAGGCATCTACCTGCGGGAGGGTACTGCTTGCAGACAGTCTACTGAGTGGACAATACAAGTTGATCCGAAATTCCATGAAGGTGCAAGTAATTTAAAGGAACTTGTCCCTTTCGAGGAATGTCTTGAGTTGCACTCCACAGATGAAGGAGTTGTACGGGTTCCTGACTATCTCCTTCTCACTAATAATGGACGTGGCTTCAACGTTGTTGTGGATCCCACAAATCTTGGGGATGGTGTGCATTACTTTGAAGTTTATGGGATTGATTGCAAAGCACCAGAGCGTGGTCCCCTTTTCAGAATCCCAGTAACAATAATAATTCCCAAGACTGTGGCAAATCAACCTCCAGTTATTTCATTTCAGCAAATGTCTTTCATCTCAGGCCACATTGAACGAAGATATATCGAGGTACCACATGGAGCAACATGGGCTGAGGCTACAATGCGAACTTCGGGGTTTGATACTACACGACGATTTTACATTGATACACTTCAGGTTTGCCCATTGCGAAGGCCTATCAAGTGGGAGAGCGCACCAACTTTCGCATCTCCGTCTGCTAAAAGCTTTGTGTTCCCTGTGGTTAGTGGTCAAACGATGGAACTAGCTATAGCTCAATTTTGGTCAAGTGGCCTCGGAAGTCGTGAACCAACTATCGTTGACTTTGAGATTGAATTCCATGGAGTTGGTGTCGATAAAGAAGAATTGTTACTTGATGGAAGTGAAGCACCAATAAAAGTTGAAGCTGAAGCACTATTGGCATCTGAAAAACTTGTTCCCATAGCTGTCCTGAACAAGATACGAGTTCCATATCAGCCTATTGATGCACAACTGAAGACTCTATCAACTGGCCGTGATAGACTACTGTCGGGCAAACAGATACTAGCATTGACCTTAACCTACAAGTTCAAATTAGAAGATTCAGCTGAAGTGAAACCGTATATACCATTATTGAACAATCGCATATATGACACAAAATTTGAGTCCCAGTTTTTTATGATCTCTGATACTAACAAGCGTGTATATGCAATGGGTGACGTTTATCCTGAGTCTTCAAAACTTCCCAAGGGAGAGTATAAACTTCAGCTGTATCTGAGGCATGAAAATGTGGAGCTGCTGGAAAAGTTGAAGCAGCTCACTGTGTTTATTGAAAGAAATATGGGGGAGATTCGGCTGAATTTACATTCTGAACCAGATGGTCCGTTCACTGGAAATGGTGCCTTTAAGTCCTCTGTTCTAATGCCAGGGGTGAAGGAAGCATTTTATCTGGGCCCACCAACAAAGGACAAGCTACCCAAGAATACCCCCCAAGGATCTATGTTGGTGGGAGAAATCTCATATGGGAAATTGTCATTTGATGAAAAAGAAGGGAAGAATCCAAAGGATAATCCGGTATCTTATCCGATATCATATGTGGTTCCACCAAATAAGCCTGAGGAAGATAAGAAGGCAGCTTCTGCCCCTACTTGCTCTAAATCAGTATCAGAACGCTTGGAACAAGAGGTTCGCGACACAAAGATCAAATTTCTTGGGAATCTAAAACAAGAAACTGAGGAAGAGCGTTCAGAGTGGAGAAAGTTGTGTACCTGTCTCAAGTCTGAATACCCAGACTATACTCCATTACTAGCTAAGATCCTGGAAGGTTTACTGTCTCGGTCTGATGCTGGGGACAAAATCAGCCATCACGAAGAGATTATAGAAGCTGCAAACGAAGTAGTACGCAGTGTTGACGTAGATGAGCTAGCAAGATTCTTGCTAGACAAAACTGAACCAGAAGATGATGAAGCAGAGAAATTGAAGAAAAAAATGGAGGTGACACGTGATCAACTGGCGGATGCACTATACCAGAAAGGGTTAGCCATGGCGAGAATCGAGAATCTGAAGGGTGAGAAGGAAGGTGAAGGAGAAGAAGAAAGTAGCCAGAAGGATAAATTCGAAGAGAATTTCAAAGAACTGACAAAATGGGTAGACGTGAAATCATCTAAATACGGTACTCTCACTGTTCTAAGAGAGAAACGGCTATCACGACTCGGGACCGCATTGAAGGTACTTGATGACTTGATCCAAAACGAGAACGAGACTGCGAATAAGAAACTCTACGAACTTAAACTGGATTTGCTGGAGGAAATAGGTTGGAGCCATTTGGTTACGTATGAGAAGCAATGGATGCAGGTTCGTTTCCCTAAAAGCCTACCCCTCTTTTAGTAGTTGTTGCTACCTTCTTGTTCAATAAAAGCTTATCCAGAACATATAGTTGCAAGTTCTTGTTCAATAAAAGCTTGTCCAGAACAAATAGTTCGTTGTTTTTCGAAACCCAAACTACTGTCTTATTTTCTGTCCGTATAAACTGTATGTTCTTAGTCTCTTTGTATTGACATTTTTCAGTTGTGGAATCAATAAAATTATCGATCAATTTAGT
CDS Sequence
Protein Sequence