Information report for AT4G20400
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. DOI: 10.1104/pp.103.029439 ; PMID: 14605227
- Divergent roles of a pair of homologous jumonji/zinc-finger-class transcription factor proteins in the regulation of Arabidopsis flowering time. DOI: 10.1105/tpc.104.025353 ; PMID: 15377760
- PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants. DOI: 10.1104/pp.106.079707 ; PMID: 16679424
- A plant-specific histone H3 lysine 4 demethylase represses the floral transition in Arabidopsis. DOI: 10.1111/j.1365-313X.2010.04182.x ; PMID: 20202164
- JMJ14, a JmjC domain protein, is required for RNA silencing and cell-to-cell movement of an RNA silencing signal in Arabidopsis. DOI: 10.1101/gad.579910 ; PMID: 20478993
- Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation. DOI: 10.1038/embor.2010.158 ; PMID: 21052090
- DNA methylation and histone modifications regulate de novo shoot regeneration in Arabidopsis by modulating WUSCHEL expression and auxin signaling. DOI: 10.1371/journal.pgen.1002243 ; PMID: 21876682
- Interplay between active chromatin marks and RNA-directed DNA methylation in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1003946 ; PMID: 24244201
- Dual Role of a SAS10/C1D Family Protein in Ribosomal RNA Gene Expression and Processing Is Essential for Reproduction in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1006408 ; PMID: 27792779
- Screening Arabidopsis mutants in genes useful for phytoremediation. DOI: 10.1016/j.jhazmat.2017.04.021 ; PMID: 28441590
- Reduction of the geomagnetic field delays Arabidopsis thaliana flowering time through downregulation of flowering-related genes. DOI: 10.1002/bem.22123 ; PMID: 29709075
- The Histone H3K4 Demethylase JMJ16 Represses Leaf Senescence in Arabidopsis. DOI: 10.1105/tpc.18.00693 ; PMID: 30712008
- Diurnal regulation of SDG2 and JMJ14 by circadian clock oscillators orchestrates histone modification rhythms in Arabidopsis. DOI: 10.1186/s13059-019-1777-1 ; PMID: 31429787
- Conditional effects of the epigenetic regulator JUMONJI 14 in Arabidopsis root growth. DOI: 10.1242/dev.183905 ; PMID: 31826870
- Metabolic control of histone demethylase activity involved in plant response to high temperature. DOI: 10.1093/plphys/kiab020 ; PMID: 33793949
- A microProtein repressor complex in the shoot meristem controls the transition to flowering. DOI: 10.1093/plphys/kiab235 ; PMID: 34015131
- Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14. DOI: 10.1038/s41467-023-37263-9 ; PMID: 36977663
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A178UUW6
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178UUW6
- EnsemblPlants: AT4G20400.1
- Gramene: AT4G20400.1
- KEGG: ath:AT4G20400
- Orthologous matrix: FEKCDIS
- ExpressionAtlas: AT4G20400
- InterPro: IPR003347, IPR003349, IPR003888
- PANTHER: PTHR10694, PTHR10694:SF105
- SUPFAM: SSF51197
- PROSITE: PS51183, PS51184, PS51542
- Gene3D: 2.60.120.650, 3.30.160.360
- SWISS-MODEL: A0A178UUW6
Sequences
cDNA Sequence
- >AT4G20400.1
CGGCTTCTTCTTTTTATGTTCTAAACCCTTTTCTTAGATCGGACTCCAAGAAATCTACTTGCTTTAATCGTTAACCTAATAAATTCTTCTCTAAGTTTTTTTTTTCTTAACTCATCAAAGAAGGAAAGAAAAAAAAAAACCTCTTTCACAGATATTTAACCAAAAGGTTTTAGATTTATACTATACGTTACAAATAAAATTCGAGAGTCAAATTCAATCTTGGGAAAAGCTTTTGTTCCGAATCTTGGCCCCTTCACGAAGGTCACGGGTTAAAAGTATCGATCTTTGTGAACTTAATCTCACTGTAAATGGATCAGCTTGCATCTCTAGCAGAGTCTGTGGCTATGGAGGAAGATTCTGAGAAACAATCGATTAAAGGAGAGAGTAGTCTTGAACCTGACTCTACTCCTTCTAGTCCTAAAATAACTGCTAGGTGGAATCCATCAGAAGCTTGCAGGCCTTTGGTTGATGACGCTCCCATCTTTTATCCCACTAATGAGGATTTTGATGATCCACTTGGTTACATAGAGAAGTTGCGCTCTAAAGCAGAATCATATGGCATATGTCGAATTGTGCCGCCTGTTGCATGGAGGCCCCCTTGCCCTCTGAAGGAGAAAAAAATATGGGAGAATTCTAAATTTCCCACCCGGATTCAGTTCATTGACTTGCTTCAAAACCGAGAACCGATTAAAAAATCTACTAAAACCAAGAAGAGAAAACGGAGAAGAATCTCTAAAATTGGATACACAAGAAGAAAAAGAGATTCAGGCTGTGATACGGCTTCCTCTGGCTCTAGTGATAGTGAAGGAAAATTTGGTTTTCAGACTGGGCCAGATTTTACCCTGGAAGAATTTCAGAAGTATGATGAATACTTTAAGGAATGCTATTTTCAGTCAGAGGATCATCCTGGTTCCAAAGCGTCTGAAAATAAGAAATTTAAACCTAAGGTTAAGGACCTTGAAGGTGAATATTGGCGGATAGTGGAGCAGGCAACTGATGAAGTAGAGGTGTACTATGGAGCTGACTTGGAAACAAAGAAATTTGGAAGTGGTTTCCCAAAGTATAAACCGGGGTATCCTATAAGTGAAGCAGATCAATACTCTCAATGTGGTTGGAACCTAAATAATTTGTCCCGTCTGCCCGGATCAGTTCTAGCTTTTGAGAGCTGCGATATCTCAGGAGTCATTGTGCCATGGCTTTATGTTGGAATGTGCTTTTCAACTTTTTGTTGGCATGTTGAAGATCATCACCTTTATTCCATGAACTACTTACACACAGGTGATCCAAAAGTTTGGTATGGGATCCCTGGAAACCATGCTGAGTCTTTTGAAAATGTAATGAAAAAGCGTCTTCCAGATTTGTTTGAAGAACAGCCTGACTTGCTACATCAACTGGTCACTCAGTTATCTCCAAGAATCTTAAAAGAGGAGGGAGTACCTGTCTATCGAGCTGTCCAGCGCAGTGGAGAATTCATTCTAACCTTCCCTAAGGCCTATCATTCTGGGTTTAATTGTGGTTTCAACTGTGCGGAAGCAGTAAATGTTGCACCAGTTGATTGGCTGGTTCATGGACAGAATGCAGTGGAAGGCTATAGCAAGCAGCGGCGAAAGAGTTCATTGTCACATGACAAGCTGCTTCTTGGAGCTGCTATGGAAGCTACTTATTGCCTCTGGGAGCTTTCACTTTCAAAGAAGAAGACTCCTGTGATTGCGAGATGGAAAAGGGTTTGTAGTGAGGATGGATTGCTTACGAAGGCAGTCAAGAAGCGTGTGCAGATGGAAGAAGAAAGACTAAATCACCTTCAAGATGGTTTTAGCTTGCGAAAGATGGAGGGTGATTTCGACAATAAGAGAGAACGGGAGTGCTTCTTGTGCTTCTATGATTTGCATATGTCTGCTTCAAGCTGCAAGTGTTCCCCCAACCGGTTTGCATGTCTTATCCACGCTAAGGATCTGTGTTCATGTGAAAGTAAGGATAGATATATCCTAATTCGCCACACCTTGGATGAGTTATGGGCACTGGTCAGAGCTCTAGAAGGGGATCTTGATGCCATAGACCTATGGGCAAGTAAATGTCGTGACCAGTATCCTTCACAGCATCCAAGAGCAAGAGAATATGCTTACCTCAAGTCTGCCCCATGTATAAAGAGCCGTGGTTCATCAAAAGTACAGCAGCGAGAACAAAACAATCTTCAGTTAGTGTCTGAACGCTTACAAAGTGATCTAACCTCAAACAAGGAAGTTCAGTTGAAACAAGATGGTGATTCAGATGTAAATCGCCATGGTCATGAAAGCGAAAGAAATCATGTACATGGGATCACTGATAAGTCAGCTGTCACGGATGTAAAACTTGGTGTGGGAGGTAAGTTTGATGAGAAGAAGATTTCGGTTGAATCTCAAAACCCACATTCAGTTTCAGATGTAGGGTGTAGCGAGCTGGCGAAGAAAGTGGATGGTTGTTTAGGAGGGAAGGACCAAAATGCTGCAACCAATAGGTTAAGTCTCTCTGTTGAGCTTTTGAGTTCTGGATCTCTCGTTGTTAAAAAGCTGTGGTGCAGTAAACAGGCCATATACCCAAAAGGGTTCAAGAGCCGTGTTAAGTTCTTAAGTGTGCTTGACCCAACAAACCTAACCAACTACATCTCAGAGGTTCTGGATGCAGGGCTTCTTGGTCCATTGTTCAGGGTCTCAGTAGAAGATTACCCCACTGAGAATTTCTCGAATGTATCTGCTGAAAAGTGCTGGCAAATGGTGACACAAAGGCTCAAACTCGAAATCATCAAGAAATGTGATCAACCAGTTAGCTCTTTGACCTCTTTACAACCTTTGGAGAGTATAAATGGGCTTGAAATGTTTGGATTTCTCTCCCCGCACGTAATTAAGGTGGTTGAGGCTCTTGATCCAAAGCATCAATTGGAGGAGTATTGGAACCAAAAAGCAGTGAAACTGTTTGGTGCTGAACCAATAAAGGAAGGAGAAAAGGATGATACAGAGAAAGGAGGGGCTTCAGATCCCTCTTTGGACCGGGACACAAGGCTTCTGCGTGGACTGTTGAAGAAGGCGACACCTGAAGAATTAGTAATGATGCATGGACTTCTGTGTGGTGAGACTCGCAACACCGAGCTCAAGGAAGAGCTCTCTACTTTGGTTGATAAGATGGAGATAAGTCCTTAAGGAGGAGCAAGCAGATAAACACACTAACACCCTTTGAAGTTGATTGTGTTTGTTGTTCCTTTGGTTATAAACTGTATCAGTAGAGAAATCTAGAGAGGCAATACAAAAGTAGACAAAAGGGTTACTTCGTTGACATGTCTTTCCTTTTTACCAAAAAAGGGTTTAGGATTAATGATTGTATTATACTGTGTTGCATTTGCAATGTACCATTGTTCTCTATATTTCATTTGCTTATTTGTAACAGCTTTTATGAT - >AT4G20400.2
CGGCTTCTTCTTTTTATGTTCTAAACCCTTTTCTTAGATCGGACTCCAAGAAATCTACTTGCTTTAATCGTTAACCTAATAAATTCTTCTCTAAGTTTTTTTTTTCTTAACTCATCAAAGAAGGAAAGAAAAAAAAAAACCTCTTTCACAGATATTTAACCAAAAGGTTTTAGATTTATACTATACGTTACAAATAAAATTCGAGAGTCAAATTCAATCTTGGGAAAAGCTTTTGTTCCGAATCTTGGCCCCTTCACGAAGGTCACGGGTTAAAAGTATCGATCTTTGTGAACTTAATCTCACTGTAAATGGATCAGCTTGCATCTCTAGCAGAGTCTGTGGCTATGGAGGAAGATTCTGAGAAACAATCGATTAAAGGAGAGAGTAGTCTTGAACCTGACTCTACTCCTTCTAGTCCTAAAATAACTGCTAGGTGGAATCCATCAGAAGCTTGCAGGCCTTTGGTTGATGACGCTCCCATCTTTTATCCCACTAATGAGGATTTTGATGATCCACTTGGTTACATAGAGAAGTTGCGCTCTAAAGCAGAATCATATGGCATATGTCGAATTGTGCCGCCTGTTGCATGGAGGCCCCCTTGCCCTCTGAAGGAGAAAAAAATATGGGAGAATTCTAAATTTCCCACCCGGATTCAGTTCATTGACTTGCTTCAAAACCGAGAACCGATTAAAAAATCTACTAAAACCAAGAAGAGAAAACGGAGAAGAATCTCTAAAATTGGATACACAAGAAGAAAAAGAGATTCAGGCTGTGATACGGCTTCCTCTGGCTCTAGTGATAGTGAAGGAAAATTTGGTTTTCAGACTGGGCCAGATTTTACCCTGGAAGAATTTCAGAAGTATGATGAATACTTTAAGGAATGCTATTTTCAGTCAGAGGATCATCCTGGTTCCAAAGCGTCTGAAAATAAGAAATTTAAACCTAAGGTTAAGGACCTTGAAGGTGAATATTGGCGGATAGTGGAGCAGGCAACTGATGAAGTAGAGGTGTACTATGGAGCTGACTTGGAAACAAAGAAATTTGGAAGTGGTTTCCCAAAGTATAAACCGGGGTATCCTATAAGTGAAGCAGATCAATACTCTCAATGTGGTTGGAACCTAAATAATTTGTCCCGTCTGCCCGGATCAGTTCTAGCTTTTGAGAGCTGCGATATCTCAGGAGTCATTGTGCCATGGCTTTATGTTGGAATGTGCTTTTCAACTTTTTGTTGGCATGTTGAAGATCATCACCTTTATTCCATGAACTACTTACACACAGGTGATCCAAAAGTTTGGTATGGGATCCCTGGAAACCATGCTGAGTCTTTTGAAAATGTAATGAAAAAGCGTCTTCCAGATTTGTTTGAAGAACAGCCTGACTTGCTACATCAACTGGTCACTCAGTTATCTCCAAGAATCTTAAAAGAGGAGGGAGTACCTGTCTATCGAGCTGTCCAGCGCAGTGGAGAATTCATTCTAACCTTCCCTAAGGCCTATCATTCTGGGTTTAATTGTGGTTTCAACTGTGCGGAAGCAGTAAATGTTGCACCAGTTGATTGGCTGGTTCATGGACAGAATGCAGTGGAAGGCTATAGCAAGCAGCGGCGAAAGAGTTCATTGTCACATGACAAGCTGCTTCTTGGAGCTGCTATGGAAGCTACTTATTGCCTCTGGGAGCTTTCACTTTCAAAGAAGAAGACTCCTGTGATTGCGAGATGGAAAAGGGTTTGTAGTGAGGATGGATTGCTTACGAAGGCAGTCAAGAAGCGTGTGCAGATGGAAGAAGAAAGACTAAATCACCTTCAAGATGGTTTTAGCTTGCGAAAGATGGAGGGTGATTTCGACAATAAGAGAGAACGGGAGTGCTTCTTGTGCTTCTATGATTTGCATATGTCTGCTTCAAGCTGCAAGTGTTCCCCCAACCGGTTTGCATGTCTTATCCACGCTAAGGATCTGTGTTCATGTGAAAGTAAGGATAGATATATCCTAATTCGCCACACCTTGGATGAGTTATGGGCACTGGTCAGAGCTCTAGAAGGGGATCTTGATGCCATAGACCTATGGGCAAGTAAATGTCGTGACCAGTATCCTTCACAGCATCCAAGAGCAAGAGAATATGCTTACCTCAAGTCTGCCCCATGTATAAAGAGCCGTGGTTCATCAAAAGTACAGCAGCGAGAACAAAACAATCTTCAGTTAGTGTCTGAACGCTTACAAAGTGATCTAACCTCAAACAAGGAAGTTCAGTTGAAACAAGATGGTGATTCAGATGTAAATCGCCATGGTCATGAAAGCGAAAGAAATCATGTACATGGGATCACTGATAAGTCAGCTGTCACGGATGTAAAACTTGGTGTGGGAGGTAAGTTTGATGAGAAGAAGATTTCGGTTGAATCTCAAAACCCACATTCAGTTTCAGATGTAGGGTGTAGCGAGCTGGCGAAGAAAGTGGATGGTTGTTTAGGAGGGAAGGACCAAAATGCTGCAACCAATAGGTTAAGTCTCTCTGTTGAGCTTTTGAGTTCTGGATCTCTCGTTGTTAAAAAGCTGTGGTGCAGTAAACAGGCCATATACCCAAAAGGGTTCAAGAGCCGTGTTAAGTTCTTAAGTGTGCTTGACCCAACAAACCTAACCAACTACATCTCAGAGGTTCTGGATGCAGGGCTTCTTGGTCCATTGTTCAGGGTCTCAGTAGAAGATTACCCCACTGAGAATTTCTCGAATGTATCTGCTGAAAAGTGCTGGCAAATGGTGACACAAAGGCTCAAACTCGAAATCATCAAGAAATGTGATCAACCAGTTAGCTCTTTGACCTCTTTACAACCTTTGGAGAGTATAAATGGGCTTGAAATGTTTGGATTTCTCTCCCCGCACGTAATTAAGGTGGTTGAGGCTCTTGATCCAAAGCATCAATTGGAGGAGTATTGGAACCAAAAAGCAGTGAAACTGTTTGGTGCTGAACCAATAAAGGAAGGAGAAAAGGATGATACAGAGAAAGGAGGGGCTTCAGATCCCTCTTTGGACCGGGACACAAGGCTTCTGCGTGGACTGTTGAAGAAGGCGACACCTGAAGAATTAGTAATGATGCATGGACTTCTGTGTGGTGAGACTCGCAACACCGAGCTCAAGGAAGAGCTCTCTACTTTGGTTGATAAGATGGAGATAAGTCCTTAAGGAGGAGCAAGCAGATAAACACACTAACACCCTTTGAAGTTGATTGTGTTTGTTGTTCCTTTGGTTATAAACTGTATCAGTAGAGAAATCTAGAGAGGCAATACAAAAGTAGACAAAAGGGTTACTTCGTTGACATGTCTTTCCTTTTTACCAAAAAAGGGTTTAGGATTAATGATTGTATTATACTGTGTTGCATTTGCAATGTACCATTGTTCTCTATATTTCATTTGCTTATTTGTAACAGCTTTTATGAT
CDS Sequence
Protein Sequence