Information report for AT4G20360
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis Rab GTPase family: another enigma variation. DOI: 10.1016/s1369-5266(02)00307-2 ; PMID: 12393015
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- The Arabidopsis ppi1 mutant is specifically defective in the expression, chloroplast import, and accumulation of photosynthetic proteins. DOI: 10.1105/tpc.012955 ; PMID: 12897258
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. DOI: 10.1105/tpc.104.023309 ; PMID: 15273297
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- TWIN SISTER OF FT (TSF) acts as a floral pathway integrator redundantly with FT. DOI: 10.1093/pcp/pci151 ; PMID: 15951566
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Computational identification of 69 retroposons in Arabidopsis. DOI: 10.1104/pp.105.060244 ; PMID: 15923328
- Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. DOI: 10.1002/pmic.200401282 ; PMID: 16254930
- pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. DOI: 10.1105/tpc.105.036392 ; PMID: 16326926
- Proteomic analysis of differentially expressed proteins in fungal elicitor-treated Arabidopsis cell cultures. DOI: 10.1093/jxb/erj149 ; PMID: 16547123
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- Comparative gene mapping in Arabidopsis lyrata chromosomes 6 and 7 and A. thaliana chromosome IV: evolutionary history, rearrangements and local recombination rates. DOI: 10.1017/S0016672306008287 ; PMID: 17014743
- Proteomic analysis of S-nitrosylated proteins in Arabidopsis thaliana undergoing hypersensitive response. DOI: 10.1002/pmic.200700536 ; PMID: 18297659
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- A proteomic analysis of Arabidopsis thaliana seedling responses to 3-oxo-octanoyl-homoserine lactone, a bacterial quorum-sensing signal. DOI: 10.1016/j.bbrc.2012.09.044 ; PMID: 22995300
- A proteomics approach identifies novel proteins involved in gravitropic signal transduction. DOI: 10.3732/ajb.1200339 ; PMID: 23281391
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The arabidopsis cyclic nucleotide interactome. DOI: 10.1186/s12964-016-0133-2 ; PMID: 27170143
- Plastid Translation Elongation Factor Tu Is Prone to Heat-Induced Aggregation Despite Its Critical Role in Plant Heat Tolerance. DOI: 10.1104/pp.17.01672 ; PMID: 29444814
- and plastid-targeted annexin 5 promotes reproductive development in Arabidopsis and is essential for pollen and embryo formation. DOI: 10.1186/s12870-018-1405-3 ; PMID: 30189843
- Chloroplast Translation Elongation Factor EF-Tu/SVR11 Is Involved in var2-Mediated Leaf Variegation and Leaf Development in Arabidopsis. DOI: 10.3389/fpls.2019.00295 ; PMID: 30915096
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- RAB GTPASE HOMOLOG 8D is required for the maintenance of both the root stem cell niche and the meristem. DOI: 10.1111/tpj.15106 ; PMID: 33258210
- Arabidopsis RAB8A, RAB8B and RAB8D Proteins Interact with Several RTNLB Proteins and are Involved in the Agrobacterium tumefaciens Infection Process. DOI: 10.1093/pcp/pcab112 ; PMID: 34255832
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. DOI: 10.1105/tpc.105.036392 ; PMID: 16326926
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Proteomic analysis of S-nitrosylated proteins in Arabidopsis thaliana undergoing hypersensitive response. DOI: 10.1002/pmic.200700536 ; PMID: 18297659
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178UY83
- EMBL: CACRSJ010000109, CACSHJ010000095, LUHQ01000004
- AlphaFoldDB: A0A178UY83
- EnsemblPlants: AT4G20360.1, AT4G20360.2
- Gramene: AT4G20360.1, AT4G20360.2
- KEGG: ath:AT4G20360
- Orthologous matrix: NYIQMMY
- ExpressionAtlas: AT4G20360
- InterPro: IPR000795, IPR004160, IPR004161
- PANTHER: PTHR43721, PTHR43721:SF5
- SUPFAM: SSF50447, SSF50465, SSF52540
- PROSITE: PS00301, PS51722
- Gene3D: 2.40.30.10, 3.40.50.300
- OrthoDB: A0A178UY83
- SWISS-MODEL: A0A178UY83
- Conserved Domain Database: cd01884, cd03697, cd03707
Sequences
cDNA Sequence
- >AT4G20360.2
ATCCCCAAATCTTCTCCTTCTCCAAAAAAATTTCAAACCCTAGCTTCTCGATTTCTCTCCTCTGCTCTCCAATTCCATCTTCCCATGGCGATTTCGGCTCCAGCCGCTTGTTCTTCCTCCTCTAGAATTCTCTGTTCCTACTCCTCTCCTTCTCCTTCTCTCTGTCCCGCCATTTCCACCTCTGGTAAACTCAAAACCCTAACTCTCTCTTCCTCCTTCCTCCCTTCTTACTCATTAACCACCACCTCCGCTTCTCAATCCACTCGTCGCTCCTTCACCGTCCGCGCCGCTCGTGGAAAGTTCGAGAGGAAGAAGCCTCATGTCAACATCGGAACCATCGGTCATGTTGACCATGGGAAAACTACTTTAACCGCAGCTCTAACCATGGCTCTCGCTTCCATTGGTTCCAGCGTCGCTAAAAAGTACGACGAGATTGACGCTGCGCCGGAGGAGAGAGCTCGTGGTATCACAATCAACACTGCTACTGTTGAGTACGAGACTGAGAATCGTCACTACGCTCACGTTGATTGTCCTGGTCACGCTGATTACGTTAAGAATATGATTACCGGAGCTGCACAGATGGACGGAGCTATCCTCGTTGTTTCCGGCGCCGATGGTCCTATGCCTCAGACTAAAGAGCATATCCTTTTGGCTAAGCAGGTTGGTGTTCCTGATATGGTTGTGTTTCTTAACAAAGAGGATCAAGTAGATGATGCAGAGTTGCTAGAGCTCGTTGAGCTTGAGGTTCGTGAGCTTCTCTCGTCTTATGAATTTAACGGTGATGATATTCCGATTATCTCTGGTTCTGCTCTTTTAGCCGTTGAGACTCTTACTGAGAATCCTAAGGTTAAGAGAGGTGATAACAAATGGGTAGATAAGATTTATGAACTTATGGATGCTGTTGATGATTACATCCCTATCCCTCAGAGACAAACTGAATTGCCATTCTTGTTAGCTGTTGAGGATGTGTTCTCTATCACTGGACGTGGTACGGTGGCTACAGGGCGTGTCGAGAGAGGTACGGTTAAGGTAGGAGAGACTGTAGATTTAGTGGGTTTGAGGGAGACTAGGAGTTACACTGTCACTGGGGTTGAAATGTTTCAGAAGATTCTTGATGAGGCTTTAGCTGGTGACAATGTAGGGTTGTTGCTTAGGGGTATTCAAAAGGCTGATATTCAGAGAGGTATGGTTTTAGCTAAGCCGGGATCGATTACTCCACATACCAAGTTTGAAGCAATTATCTATGTGTTGAAGAAAGAGGAAGGTGGAAGGCATTCTCCATTCTTTGCAGGGTACAGGCCTCAGTTCTACATGAGGACGACTGATGTTACGGGTAAAGTGACGAAGATCATGAACGACAAAGATGAAGAGTCGAAGATGGTTATGCCCGGTGATCGAGTGAAGATTGTTGTTGAGCTTATTGTGCCGGTGGCTTGTGAACAAGGGATGAGGTTTGCTATCAGAGAAGGAGGAAAGACTGTTGGTGCTGGAGTTATTGGGACGATCCTCGAATGATTATAAGGTTTTAGAGAGTTTCATATAGATTTGTTTAATGAAAGATTCGCAATACAGAGTGACATGATAAGTAATGAGATGGACACAAGGAATCTCACGTGTCCTCATCTTCCAACTTGTTCTTCCAATGACCCGTGAGGATAGAGAAAAAATAGTTCTAAGACAGAGCCAAAAGGACACCCCTTTTAAGTCAG - >AT4G20360.1
ATCCCCAAATCTTCTCCTTCTCCAAAAAAATTTCAAACCCTAGCTTCTCGATTTCTCTCCTCTGCTCTCCAATTCCATCTTCCCATGGCGATTTCGGCTCCAGCCGCTTGTTCTTCCTCCTCTAGAATTCTCTGTTCCTACTCCTCTCCTTCTCCTTCTCTCTGTCCCGCCATTTCCACCTCTGGTAAACTCAAAACCCTAACTCTCTCTTCCTCCTTCCTCCCTTCTTACTCATTAACCACCACCTCCGCTTCTCAATCCACTCGTCGCTCCTTCACCGTCCGCGCCGCTCGTGGAAAGTTCGAGAGGAAGAAGCCTCATGTCAACATCGGAACCATCGGTCATGTTGACCATGGGAAAACTACTTTAACCGCAGCTCTAACCATGGCTCTCGCTTCCATTGGTTCCAGCGTCGCTAAAAAGTACGACGAGATTGACGCTGCGCCGGAGGAGAGAGCTCGTGGTATCACAATCAACACTGCTACTGTTGAGTACGAGACTGAGAATCGTCACTACGCTCACGTTGATTGTCCTGGTCACGCTGATTACGTTAAGAATATGATTACCGGAGCTGCACAGATGGACGGAGCTATCCTCGTTGTTTCCGGCGCCGATGGTCCTATGCCTCAGACTAAAGAGCATATCCTTTTGGCTAAGCAGGTTGGTGTTCCTGATATGGTTGTGTTTCTTAACAAAGAGGATCAAGTAGATGATGCAGAGTTGCTAGAGCTCGTTGAGCTTGAGGTTCGTGAGCTTCTCTCGTCTTATGAATTTAACGGTGATGATATTCCGATTATCTCTGGTTCTGCTCTTTTAGCCGTTGAGACTCTTACTGAGAATCCTAAGGTTAAGAGAGGTGATAACAAATGGGTAGATAAGATTTATGAACTTATGGATGCTGTTGATGATTACATCCCTATCCCTCAGAGACAAACTGAATTGCCATTCTTGTTAGCTGTTGAGGATGTGTTCTCTATCACTGGACGTGGTACGGTGGCTACAGGGCGTGTCGAGAGAGGTACGGTTAAGGTAGGAGAGACTGTAGATTTAGTGGGTTTGAGGGAGACTAGGAGTTACACTGTCACTGGGGTTGAAATGTTTCAGAAGATTCTTGATGAGGCTTTAGCTGGTGACAATGTAGGGTTGTTGCTTAGGGGTATTCAAAAGGCTGATATTCAGAGAGGTATGGTTTTAGCTAAGCCGGGATCGATTACTCCACATACCAAGTTTGAAGCAATTATCTATGTGTTGAAGAAAGAGGAAGGTGGAAGGCATTCTCCATTCTTTGCAGGGTACAGGCCTCAGTTCTACATGAGGACGACTGATGTTACGGGTAAAGTGACGAAGATCATGAACGACAAAGATGAAGAGTCGAAGATGGTTATGCCCGGTGATCGAGTGAAGATTGTTGTTGAGCTTATTGTGCCGGTGGCTTGTGAACAAGGGATGAGGTTTGCTATCAGAGAAGGAGGAAAGACTGTTGGTGCTGGAGTTATTGGGACGATCCTCGAATGATTATAAGGTTTTAGAGAGTTTCATATAGATTTGTTTAATGAAAGATTCGCAATACAGAGTGACATGATAAGTAATGAGATGGACACAAGGAATCTCACGTGTCCTCATCTTCCAACTTGTTCTTCCAATGACCCGTGAGGATAGAGAAAAAATAGTTCTAAGACAGAGCCAAAAGGACACCCCTTTTAAGTCAG
CDS Sequence
Protein Sequence