Gene Details:
- Gene ID: AT4G20090
- Gene Symbol: EMB1025, MSP1
- Gene Name: embryo defective 1025, MITOCHONDRIA STABILITY/PROCESSING PPR FACTOR1
- Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
- TAIR Accession: locus:2119747
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0005739 — located in — mitochondrion
- GO:0009507 — located in — chloroplast
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0003723 — enables — RNA binding
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis. DOI: 10.1105/tpc.104.022236 ; PMID: 15269332
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Arabidopsis emb175 and other ppr knockout mutants reveal essential roles for pentatricopeptide repeat (PPR) proteins in plant embryogenesis. DOI: 10.1007/s00425-004-1452-x ; PMID: 15647901
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Interplay of endonucleolytic and exonucleolytic processing in the 3'-end formation of a mitochondrial nad2 RNA precursor in Arabidopsis. DOI: 10.1093/nar/gkad493 ; PMID: 37293952
- Arabidopsis emb175 and other ppr knockout mutants reveal essential roles for pentatricopeptide repeat (PPR) proteins in plant embryogenesis. DOI: 10.1007/s00425-004-1452-x ; PMID: 15647901
Sequences:
cDNA Sequence
- >AT4G20090.1
TCAATTAATTGAGAGGAAACAAAAAAATTGAAATTTATTGATAACTCTTAGTGGCGAAGAAGAGAAGAAGCAGAAATCAAATGTCATCGTTTATCAACAAACCTCTAAATTGATCGAATATCTTCTTCAATCTTCATCTCTCTTTCAAATCTGCAAATGAGAGAGCTGTAAGAGTTGCATCATCTCTATCTCTTTCTCTCTCTCTCTTGCGAAAACACCAAACTTTTGAAATCCCCAAATAAGGGTTTAAGCATAAACCCTACGAGTTCATGCCCAAATGCCCAATCCCAATCCGTATCAGCTTCTTCAGCTACTTTCTCAAAGAAAGTCGAATCCTTTCGAGTAACCCAGTTAACTTCTCTATCCATCTTCGCTTCTCTTCTTCTGTTTCGGTTTCTCCTAACCCGTCAATGGAAGTGGTGGAGAATCCATTGGAAGCTCCAATCTCGGAGAAGATGTTTAAATCAGCTCCCAAAATGGGTTCTTTCAAGTTGGGTGATTCTACTTTATCTTCAATGATTGAGAGTTACGCCAATTCGGGTGATTTTGATTCGGTAGAGAAGCTTTTGAGTCGAATTAGATTAGAGAACAGAGTGATTATAGAGCGTAGTTTCATTGTTGTCTTTAGAGCTTATGGGAAAGCACATTTGCCTGATAAAGCTGTAGACTTGTTTCATAGAATGGTTGATGAGTTTCGATGTAAACGTAGTGTTAAGTCGTTTAACTCTGTGTTGAATGTGATTATAAACGAGGGTCTTTATCATCGAGGATTGGAGTTTTATGATTATGTTGTGAATTCCAACATGAACATGAACATTTCTCCTAATGGGTTGAGTTTTAATTTGGTCATTAAGGCTCTTTGTAAGTTAAGATTTGTGGATAGAGCTATTGAGGTCTTCAGAGGAATGCCTGAGAGAAAGTGTTTGCCTGATGGTTATACGTATTGTACATTGATGGATGGGTTGTGTAAGGAGGAAAGGATTGATGAGGCGGTTTTACTGTTGGATGAGATGCAGAGCGAGGGGTGTTCACCGAGTCCGGTTATATATAATGTGTTGATTGATGGATTGTGCAAGAAAGGGGATTTGACACGGGTGACAAAGCTTGTGGATAATATGTTTCTTAAGGGATGTGTTCCTAATGAGGTTACTTATAATACGCTTATTCATGGTCTATGTCTTAAGGGTAAGTTAGATAAAGCTGTTAGTCTCTTGGAGCGGATGGTGTCTAGCAAATGTATCCCAAATGATGTCACATATGGAACGCTGATTAATGGGTTGGTTAAGCAAAGACGAGCAACGGATGCGGTTAGGTTGTTGAGCTCTATGGAAGAAAGAGGGTATCATTTGAATCAGCATATTTATTCGGTCCTTATAAGTGGGTTGTTCAAAGAGGGAAAGGCCGAGGAGGCTATGTCCTTGTGGAGGAAAATGGCAGAGAAAGGATGCAAGCCCAATATTGTTGTGTACAGTGTTCTTGTAGATGGTTTATGCCGCGAAGGGAAACCAAATGAAGCTAAAGAGATCCTTAATAGAATGATTGCTAGTGGCTGCTTGCCCAATGCGTATACGTATAGCTCATTGATGAAAGGATTCTTCAAAACTGGTCTTTGTGAAGAAGCGGTTCAAGTGTGGAAAGAGATGGATAAAACCGGATGTTCTCGAAATAAGTTTTGTTATAGTGTTCTAATCGATGGTCTTTGTGGGGTTGGGAGAGTTAAGGAGGCTATGATGGTGTGGTCAAAGATGCTCACTATCGGGATCAAACCTGATACAGTAGCTTATAGCTCAATTATAAAAGGTCTTTGTGGTATTGGCTCGATGGATGCGGCCTTAAAACTTTACCATGAGATGTTATGCCAAGAAGAACCCAAGTCACAACCTGATGTTGTTACTTATAATATACTTCTTGATGGCTTATGTATGCAAAAAGATATCTCTAGAGCAGTAGATCTCTTGAACTCTATGTTAGATAGAGGTTGTGATCCCGATGTTATTACGTGTAACACCTTTTTGAATACTTTGAGCGAGAAGTCAAATTCTTGTGACAAAGGGAGGAGTTTTCTAGAAGAGCTTGTTGTAAGGCTCTTAAAGCGTCAGAGAGTATCAGGCGCGTGTACGATTGTGGAAGTAATGCTGGGTAAGTATCTGGCACCGAAGACCTCCACTTGGGCGATGATTGTTCGAGAGATCTGTAAACCAAAGAAGATCAATGCCGCCATTGATAAATGCTGGAGGAACCTGTGTACTTGAACACTACAGAGCATTTTTGCTCAGATCCCGTTTCCACCTTAAGAGTCTCCATGCGTGGGAACTTTTTGCGCTTCTGGAGTTTTGGAATACCAGAAATGCGCGCGAAAAACAGCTTGAACCAAAATGAAAGATCTTCGAAGTCTGATTGGGTCTCTTTATGGCTGAAAACCTCGAGCTCCTAGGCAAAGAAAGAGAAGTCTGAAATTGATCAGCAATGCTCCATAAGCGAAGCTTAAAGATTTGTGTCGTGGTTCACTTACTTACCTTGAAACTACTATACAGACTCTTTTTTTTTGTGGTTTAATGTAATACTATATATAAAGATATGTAACTGATCAGAAACAAATTTCTTTGATTCAAATTCGGATTCAGATAAGTGTATATCTTGCATACTCACAAATGCTATTAGCTGAACGCAACCAACCTGAGCAAA - >AT4G20090.2
TCAATTAATTGAGAGGAAACAAAAAAATTGAAATTTATTGATAACTCTTAGTGGCGAAGAAGAGAAGAAGCAGAAATCAAATGTCATCGTTTATCAACAAACCTCTAAATTGATCGAATATCTTCTTCAATCTTCATCTCTCTTTCAAATCTGCAAATGAGAGAGCTGTAAGAGTTGCATCATCTCTATCTCTTTCTCTCTCTCTCTTGCGAAAACACCAAACTTTTGAAATCCCCAAATAAGGGTTTAAGCATAAACCCTACGAGTTCATGCCCAAATGCCCAATCCCAATCCGTATCAGCTTCTTCAGCTACTTTCTCAAAGAAAGTCGAATCCTTTCGAGTAACCCAGTTAACTTCTCTATCCATCTTCGCTTCTCTTCTTCTGTTTCGGTTTCTCCTAACCCGTCAATGGAAGTGGTGGAGAATCCATTGGAAGCTCCAATCTCGGAGAAGATGTTTAAATCAGCTCCCAAAATGGGTTCTTTCAAGTTGGGTGATTCTACTTTATCTTCAATGATTGAGAGTTACGCCAATTCGGGTGATTTTGATTCGGTAGAGAAGCTTTTGAGTCGAATTAGATTAGAGAACAGAGTGATTATAGAGCGTAGTTTCATTGTTGTCTTTAGAGCTTATGGGAAAGCACATTTGCCTGATAAAGCTGTAGACTTGTTTCATAGAATGGTTGATGAGTTTCGATGTAAACGTAGTGTTAAGTCGTTTAACTCTGTGTTGAATGTGATTATAAACGAGGGTCTTTATCATCGAGGATTGGAGTTTTATGATTATGTTGTGAATTCCAACATGAACATGAACATTTCTCCTAATGGGTTGAGTTTTAATTTGGTCATTAAGGCTCTTTGTAAGTTAAGATTTGTGGATAGAGCTATTGAGGTCTTCAGAGGAATGCCTGAGAGAAAGTGTTTGCCTGATGGTTATACGTATTGTACATTGATGGATGGGTTGTGTAAGGAGGAAAGGATTGATGAGGCGGTTTTACTGTTGGATGAGATGCAGAGCGAGGGGTGTTCACCGAGTCCGGTTATATATAATGTGTTGATTGATGGATTGTGCAAGAAAGGGGATTTGACACGGGTGACAAAGCTTGTGGATAATATGTTTCTTAAGGGATGTGTTCCTAATGAGGTTACTTATAATACGCTTATTCATGGTCTATGTCTTAAGGGTAAGTTAGATAAAGCTGTTAGTCTCTTGGAGCGGATGGTGTCTAGCAAATGTATCCCAAATGATGTCACATATGGAACGCTGATTAATGGGTTGGTTAAGCAAAGACGAGCAACGGATGCGGTTAGGTTGTTGAGCTCTATGGAAGAAAGAGGGTATCATTTGAATCAGCATATTTATTCGGTCCTTATAAGTGGGTTGTTCAAAGAGGGAAAGGCCGAGGAGGCTATGTCCTTGTGGAGGAAAATGGCAGAGAAAGGATGCAAGCCCAATATTGTTGTGTACAGTGTTCTTGTAGATGGTTTATGCCGCGAAGGGAAACCAAATGAAGCTAAAGAGATCCTTAATAGAATGATTGCTAGTGGCTGCTTGCCCAATGCGTATACGTATAGCTCATTGATGAAAGGATTCTTCAAAACTGGTCTTTGTGAAGAAGCGGTTCAAGTGTGGAAAGAGATGGATAAAACCGGATGTTCTCGAAATAAGTTTTGTTATAGTGTTCTAATCGATGGTCTTTGTGGGGTTGGGAGAGTTAAGGAGGCTATGATGGTGTGGTCAAAGATGCTCACTATCGGGATCAAACCTGATACAGTAGCTTATAGCTCAATTATAAAAGGTCTTTGTGGTATTGGCTCGATGGATGCGGCCTTAAAACTTTACCATGAGATGTTATGCCAAGAAGAACCCAAGTCACAACCTGATGTTGTTACTTATAATATACTTCTTGATGGCTTATGTATGCAAAAAGATATCTCTAGAGCAGTAGATCTCTTGAACTCTATGTTAGATAGAGGTTGTGATCCCGATGTTATTACGTGTAACACCTTTTTGAATACTTTGAGCGAGAAGTCAAATTCTTGTGACAAAGGGAGGAGTTTTCTAGAAGAGCTTGTTGTAAGGCTCTTAAAGCGTCAGAGAGTATCAGGCGCGTGTACGATTGTGGAAGTAATGCTGGGTAAGTATCTGGCACCGAAGACCTCCACTTGGGCGATGATTGTTCGAGAGATCTGTAAACCAAAGAAGATCAATGCCGCCATTGATAAATGCTGGAGGAACCTGTGTACTTGAACACTACAGAGCATTTTTGCTCAGATCCCGTTTCCACCTTAAGAGTCTCCATGCGTGGGAACTTTTTGCGCTTCTGGAGTTTTGGAATACCAGAAATGCGCGCGAAAAACAGCTTGAACCAAAATGAAAGATCTTCGAAGTCTGATTGGGTCTCTTTATGGCTGAAAACCTCGAGCTCCTAGGCAAAGAAAGAGAAGTCTGAAATTGATCAGCAATGCTCCATAAGCGAAGCTTAAAGATTTGTGTCGTGGTTCACTTACTTACCTTGAAACTACTATACAGACTCTTTTTTTTTGTGGTTTAATGTAATACTATATATAAAGATATGTAACTGATCAGAAACAAATTTCTTTGATTCAAATTCGGATTCAGATAAGTGTATATCTTGCATACTCACAAATGCTATTAGCTGAACGCAACCAACCTGAGCAAA
CDS Sequence
Protein Sequence