Information report for AT4G20060
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009555 — acts upstream of or within — pollen development
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005634 — located in — nucleus
- GO:0034472 — involved in — snRNA 3-end processing GO:0034472 29532 P other metabolic processes IBA none PANTHER:PTN000330295|TAIR:locus:2119722|FB:FBgn0036038 Communication:501741973 2023-06-07 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within snRNA 3-end processing
- NONE — involved in — snRNA 3-end processing GO:0034472 29532 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000330295|TAIR:locus:2119722|FB:FBgn0036038 Communication:501741973 2023-06-07 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within embryo development ending in seed dormancy GO:0009793 11994 P embryo development IMP analysis of visible trait NONE Publication:501772066|PMID:27780203 TAIR 2017-02-28 AT4G20060 locus:2119722 AT4G20060 acts upstream of or within embryo development ending in seed dormancy GO:0009793 11994 P multicellular organism development NAS Database entries that dont cite a paper (e.g. SwissProt records)
- GO:0032039 — part of — integrator complex
Functional Keywords
Literature and News
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- snRNA 3' End Processing by a CPSF73-Containing Complex Essential for Development in Arabidopsis. DOI: 10.1371/journal.pbio.1002571 ; PMID: 27780203
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Gene Resources
- UniProt: O49433
- EMBL: AL021637, AL161552, CP002687
- AlphaFoldDB: O49433
- EnsemblPlants: AT4G20060.1
- Gramene: AT4G20060.1
- KEGG: ath:AT4G20060
Sequences
cDNA Sequence
- >AT4G20060.1
CGGCAGCTAATAATTTGAAGTCGGGTTTGGTCCTCGATTGAATTTTTATGTTCTGTAAATTCGTGAGAAGAGGCTTCTTCATCTGCGTATGGCGTGAAAATTCGTAATCTTTCGTTTGACAGAACTCTTCTATTTATCATCAATCTCCGGTTTCTTCTTCTTTGTAAGCCCTAAGAAGCCAAAAAGTGCTAACCATGGAGAAGGTTTCAGCAGCTTGCGCCATGGAATGGAGCATCAAGCTCGAGAAATCTCTTCGTTCTAAAAACTCAGTTAAAGCCGTTGAAGCTATCTTAGAGACTGGTGGGAAGCTTGAACAGTGGAGTAAAGAACCAGAATCTGCTATTGCTGTTTACAATTTATTTGGTTTGGTTCCTGAAGAAGATAAGCTCTTTTCAAATACTATCCTGTTGAGGCTTGTTGACGCGTTTTGTGTTGGGGATAAGCTTATTAAGCTTGCTGTTGTTCGGGTTTTTATGTCTATGTTTAAGCTAAGCCGAGGGAAGAACGTAAATGAATCAGCAAGTTGGTTTTTGTCAAAGGGTAGGGTGCATAACCACTTGGAATTGCTTACACGAGTGAAGAATGTGTATGATAAGGGTGATACTGAGTCTAAAGCTTTGGCTTTGATTCTGTTTGGTTGTTGGAGAGATTTTGCTAGCGAATTTGCTCCTGTACGGTATTTGGTTTTCAGCAGTATGGTTTCTCCTCATGATCTGGAGGGAAGATCAGCTCTGTTTGCTGCAGCTTGCTTTTGTGAAGTAGCAGATGACTTTGCATTGGTTGTTCTGGGGATGTTAAACGACATGGTGAAGTTCCCAGACATAACGCCAAAGACCAGGTTAGCTGCTGTGCGAGTTTTTGCAAAAATGGGATGCTCGCATACAATTGCTAATAGAGCATTCAAGATTTGTATGAAGCTAATGCTGGACTCCCCAAAAGAGGACAATTTGGTTCCATTCCTGGTTTCCTTGACTAAGCTTGCTTCAAGATCAACTCATCTTGCTTCTGAACTGGCAGAGGTTATCATACCCTTTCTGGGTGAAGATAAAACTTCTCATGCTCGAGCTGCAGTATTGAGATGTCTCCACTTTCTCATAGAAAGAGGGATGTGCTTCTCTCTTGCCCATGAAAGAGATATTGCAAGTGTTTCAAGCTTATTAAAGCAAGAAGAGCTCTCATCAGATATGCAAGTTAAAGCTCTTCAAATTTTTCAGAAGATAGTTGTCTACAAACTATGCATGACTGATGCATCTGAATTACTTCAGCTCATAGCTATTACTGAGAATGCATCTCATTCTCAGATCTTTTCAAGCAGTTGTTTAGCCATCAGTGTCTTGGTGAGTATATGGACAGAAATAGTTCGGACAGCGGAAAAAAGATCAATTGAGATATCTTCAACATCTCTTCCGATGCAGCTCGTTGTATTAATCATGGACAGGGTCGCCTTGCTGGGGCGATTATGTTCTGATCTTTTTCGAGCTGGCTATGCTGTAGTTAGTGAGGTTCAAGACCTCTTGAAGGTTCTCCACCTATTAGTAGGAAAACATTCTGAACTGAGACTGCTAGTTCTTGAAAAAGTCAGATTATTCTTAACGTATATTGTGAGCCTAAATGATGGCTTAAGAAAAGCAGATGGAGCTCATGAATTGCTATTTGGTGTTATCAATTATAAAGACAAAAGAGGGGTGGTCATGAGGTCAGAGTTTCTAGCATCAATACACAAGTTCCTGATAGTGTTCTTGGAAAATCTCGAGGGAGATGATAATCTTTTGTCTGAAATTTATGAAAAGGTGAAGCATATCACTGAGTTTGTAAGTTCATGCAGCTTCATTGATTTCCACACACAAATGATATTCACACTGCTACTACATTCCCCGATTCTTTGGGGATTCTCTGTGAATGATGATACAGGAAATTCAGGCGTATCACTTGTTGCTGATATAGTTAACTATGGAATCGTTTCTCTTGACTGTTCAAATCAGATTTTAATGGAGAGAAACTACTGGCCTGCTTACAGAGCTGGGGTTTACGCAGCACGTTTGGGTGCTTGGGTCACATCTGCTATGATTTTTGACCAGCTCAAAACCAACGTCCAGTCTGATATTAATTGTTGCTGGTTAAAGTCATTAACCTATTTATCCCATGCCGAGGGAAAATTCCAACTGCTTCTCACTCCAAGTGATAGTGTCAAGTTAGTCAATTGGCTGAAAAATAATGGTTATTTACCAGAACTCTCCAAAGATGCCTCTGGAGAGTTTGCACACTGTCTAGCTCTTCGTGAAGCTTATATGAATTTACAATCGTCTCTGGGAATGTTGGGAAATATTATAGCGTCAAGTGGAGTATTCTGTTTCCAAACGTGGTTCTTGGTTCTAAAGACTCGGGTATTGGAAACCGTGCTTGAACTCGTCGAATGCCTTGGGCTGCTTAACCAAGATTTACGCAACAAGAATCAGGTGGAAGAAATACTCTTGACTGGTTGCGATTCCCTGCAACAGCTTCCTCGGATTTCTATTCAGCTACAAAAGTTGGCAAAGGAATTTGATATGTTGGCGACGTGTTTCATAGACATAGACGATAGCAGTTCTAGCATTATCACAACAATTTCACTGAGCTGTTCAGTTCTGGCTTTTGCTGCTGGAATTGTTCTTTTCCTTCCAGGTTTTTCTTTTCAAGAAGCATTGGTTCCTTTCACTTCACAAAGCGGTCTGTGCTCGAGGCTTGTAGAAGATTTAGTTCGACGGCTGTGGAAAGTAGACCCCAATGTCTGCGAAAAGCTCAACATACTCGTTAACACAAACGAGTCGTTAAACTGTTTCCATTTGCAATCTAGGAATCAGGTTTTGAGAGTCTGTGGCAAAGTAAAGATGCTGCTCTCTATTTGCAGAGATGCTCTTTCATGCACTTATGGATTGCAGAATCAGTCAATGTCAATGCACAAAGAGGAGATTATGTCTGAGATTACGAAAAGTTGCAGGCATCTACTGTCACAAGCAATTATGAAATGGATGCAGATTCCTTTTGGTATTCCAAAGTATTTCTTCAACATAAGGCCTTGTGTTGGTGCCGAGCTATTTGCTCTTAGTTCAGAGAGTAGCAAACGTATTCCTGACACAGTTTCAGTGGAACAAGGGTTTCAACTGTCACTAGATCTTTGTCTTCAGTTGAAAAACATAAAACAACGGCAAGTCCCTGTTCGACTTAACAAACTGTATTGCCTTCTCTATACTAAACTAGCTTATCATTCTCCAACTCAACACGGTGAAAACAACAGAAACCAAATGTCTTATTCCCCTTGGAGAGATGAAGATCTGATTGAAATGAGTAACAAGCTGTTTCATCATGCTATAAAGTCTGGTAAGAAGCCGGACGTCTCAGGTCGATTTGATTGGGCCAAGAGTGGTGTTTCTACGGTTGTGCAGTTCGAACCAAACGAGAGAGGACAAGGGTTTTCAAGCTGCTTGTTAGACGTTTCGCGTTTCCCGGTTGGTTCATATCAAATAAAATGGCTAAGCTGTTGCGTTGATCAACATGGTTCTTACTGGAATCTTCTACCTCTCAATGGCAAACCTGTGTTTACGGTTAAGAAAGCGTCATGACTAGAATAAGTGTTGGTTTTGACATGGCGGAAGAGTAAAAAGATCTAAGGAGGATCTAGTTCGGGAGCAAGCAAGAAATGAGACAGAGATTGGCTTTAAGACTAATCTCGAAATATGCAGCTACACATAAGAGAGATGTTTGCTTCAACACTATTTAGGTGAACTAATTTTTATTGGTATGTTGTTATGTTATGTTAACTAGATTGTAGACTAAAATCCATGAAAATTAAAGCTTGAAAAGCTAAAGTCAATTCCATCTAACACTGATATGTGATAATTAGCTAATAAGTAATAATTAAAGCT
CDS Sequence
Protein Sequence