Information report for AT4G19690
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Literature and News
- Involvement of NRAMP1 from Arabidopsis thaliana in iron transport. DOI: NA ; PMID: 10769179
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
- AtNRAMP3, a multispecific vacuolar metal transporter involved in plant responses to iron deficiency. DOI: 10.1046/j.1365-313x.2003.01760.x ; PMID: 12787249
- Expression profiling of the Arabidopsis ferric chelate reductase (FRO) gene family reveals differential regulation by iron and copper. DOI: 10.1007/s00425-005-0165-0 ; PMID: 16362328
- Ethylene could influence ferric reductase, iron transporter, and H+-ATPase gene expression by affecting FER (or FER-like) gene activity. DOI: 10.1093/jxb/erl189 ; PMID: 17085755
- PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport. DOI: 10.1105/tpc.106.047407 ; PMID: 17337631
- Expression and functional analysis of metal transporter genes in two contrasting ecotypes of the hyperaccumulator Thlaspi caerulescens. DOI: 10.1093/jxb/erm025 ; PMID: 17404382
- Cytokinins negatively regulate the root iron uptake machinery in Arabidopsis through a growth-dependent pathway. DOI: 10.1111/j.1365-313X.2008.03502.x ; PMID: 18397377
- Manganese deficiency alters the patterning and development of root hairs in Arabidopsis. DOI: 10.1093/jxb/ern195 ; PMID: 18772308
- A soil bacterium regulates plant acquisition of iron via deficiency-inducible mechanisms. DOI: 10.1111/j.1365-313X.2009.03803.x ; PMID: 19154225
- NRAMP genes function in Arabidopsis thaliana resistance to Erwinia chrysanthemi infection. DOI: 10.1111/j.1365-313X.2008.03775.x ; PMID: 19121106
- Increased sensitivity to iron deficiency in Arabidopsis thaliana overaccumulating nicotianamine. DOI: 10.1093/jxb/erp007 ; PMID: 19188276
- Arabidopsis IRT2 cooperates with the high-affinity iron uptake system to maintain iron homeostasis in root epidermal cells. DOI: 10.1007/s00425-009-0904-8 ; PMID: 19252923
- Microbial siderophores exert a subtle role in Arabidopsis during infection by manipulating the immune response and the iron status. DOI: 10.1104/pp.109.138636 ; PMID: 19448037
- FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis. DOI: 10.1038/cr.2008.26 ; PMID: 18268542
- Dissecting iron deficiency-induced proton extrusion in Arabidopsis roots. DOI: 10.1111/j.1469-8137.2009.02908.x ; PMID: 19549134
- Carbon monoxide improves adaptation of Arabidopsis to iron deficiency. DOI: 10.1111/j.1467-7652.2009.00469.x ; PMID: 20055961
- Ethylene and nitric oxide involvement in the up-regulation of key genes related to iron acquisition and homeostasis in Arabidopsis. DOI: 10.1093/jxb/erq203 ; PMID: 20627899
- Differential expression and regulation of iron-regulated metal transporters in Arabidopsis halleri and Arabidopsis thaliana–the role in zinc tolerance. DOI: 10.1111/j.1469-8137.2010.03606.x ; PMID: 21219335
- iTRAQ analysis reveals mechanisms of growth defects due to excess zinc in Arabidopsis. DOI: 10.1104/pp.110.169730 ; PMID: 21325567
- Proteasome-mediated turnover of the transcriptional activator FIT is required for plant iron-deficiency responses. DOI: 10.1111/j.1365-313X.2011.04565.x ; PMID: 21426424
- Suppression of Fe deficiency gene expression by jasmonate. DOI: 10.1016/j.plaphy.2011.01.025 ; PMID: 21334215
- Localized iron supply triggers lateral root elongation in Arabidopsis by altering the AUX1-mediated auxin distribution. DOI: 10.1105/tpc.111.092973 ; PMID: 22234997
- Vacuolar nicotianamine has critical and distinct roles under iron deficiency and for zinc sequestration in Arabidopsis. DOI: 10.1105/tpc.111.095042 ; PMID: 22374397
- Induction of IRT1 by the nickel-induced iron-deficient response in Arabidopsis. DOI: 10.4161/psb.19263 ; PMID: 22476458
- A survey of dominant mutations in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2012.08.006 ; PMID: 22995285
- Arabidopsis bHLH100 and bHLH101 control iron homeostasis via a FIT-independent pathway. DOI: 10.1371/journal.pone.0044843 ; PMID: 22984573
- Requirement and functional redundancy of Ib subgroup bHLH proteins for iron deficiency responses and uptake in Arabidopsis thaliana. DOI: 10.1093/mp/sss089 ; PMID: 22983953
- Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis. DOI: 10.1104/pp.112.208603 ; PMID: 23250624
- Effects of deficiency and excess of zinc on morphophysiological traits and spatiotemporal regulation of zinc-responsive genes reveal incidence of cross talk and macronutrients. DOI: 10.1021/es400113y ; PMID: 23590825
- Root transcriptome analysis of Arabidopsis thaliana exposed to beneficial Bacillus subtilis FB17 rhizobacteria revealed genes for bacterial recruitment and plant defense independent of malate efflux. DOI: 10.1007/s00425-013-1920-2 ; PMID: 23794026
- Arabidopsis thaliana nicotianamine synthase 4 is required for proper response to iron deficiency and to cadmium exposure. DOI: 10.1016/j.plantsci.2013.04.006 ; PMID: 23759098
- Arabidopsis HY1 confers cadmium tolerance by decreasing nitric oxide production and improving iron homeostasis. DOI: 10.1093/mp/sst122 ; PMID: 23974911
- Gibberellin-induced expression of Fe uptake-related genes in Arabidopsis. DOI: 10.1093/pcp/pct160 ; PMID: 24192296
- The Arabidopsis Mediator subunit MED16 regulates iron homeostasis by associating with EIN3/EIL1 through subunit MED25. DOI: 10.1111/tpj.12440 ; PMID: 24456400
- Arabidopsis thaliana mutant lpsi reveals impairment in the root responses to local phosphate availability. DOI: 10.1016/j.plaphy.2013.12.009 ; PMID: 24561248
- Uranium perturbs signaling and iron uptake response in Arabidopsis thaliana roots. DOI: 10.1039/c4mt00005f ; PMID: 24549117
- The diverse roles of FRO family metalloreductases in iron and copper homeostasis. DOI: 10.3389/fpls.2014.00100 ; PMID: 24711810
- Polarization of IRON-REGULATED TRANSPORTER 1 (IRT1) to the plant-soil interface plays crucial role in metal homeostasis. DOI: 10.1073/pnas.1402262111 ; PMID: 24843126
- Role of Fe-responsive genes in bioreduction and transport of ionic gold to roots of Arabidopsis thaliana during synthesis of gold nanoparticles. DOI: 10.1016/j.plaphy.2014.09.013 ; PMID: 25289518
- Correlation analysis of proteins responsive to Zn, Mn, or Fe deficiency in Arabidopsis roots based on iTRAQ analysis. DOI: 10.1007/s00299-014-1696-2 ; PMID: 25366567
- An eukaryotic translation initiation factor, AteIF5A-2, affects cadmium accumulation and sensitivity in Arabidopsis. DOI: 10.1111/jipb.12329 ; PMID: 25559189
- Induction of Nickel Accumulation in Response to Zinc Deficiency in Arabidopsis thaliana. DOI: 10.3390/ijms16059420 ; PMID: 25923075
- Rhizobacterial volatiles and photosynthesis-related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and iron-deficiency responses. DOI: 10.1111/tpj.12995 ; PMID: 26307542
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Glutathione plays an essential role in nitric oxide-mediated iron-deficiency signaling and iron-deficiency tolerance in Arabidopsis. DOI: 10.1111/tpj.13011 ; PMID: 26333047
- MPK3/MPK6 are involved in iron deficiency-induced ethylene production in Arabidopsis. DOI: 10.3389/fpls.2015.00953 ; PMID: 26579185
- Increased Sucrose Accumulation Regulates Iron-Deficiency Responses by Promoting Auxin Signaling in Arabidopsis Plants. DOI: 10.1104/pp.15.01598 ; PMID: 26644507
- The Pseudomonas fluorescens Siderophore Pyoverdine Weakens Arabidopsis thaliana Defense in Favor of Growth in Iron-Deficient Conditions. DOI: 10.1104/pp.15.01537 ; PMID: 26956666
- Paenibacillus polymyxa BFKC01 enhances plant iron absorption via improved root systems and activated iron acquisition mechanisms. DOI: 10.1016/j.plaphy.2016.04.025 ; PMID: 27105423
- Exogenous Melatonin Improves Plant Iron Deficiency Tolerance via Increased Accumulation of Polyamine-Mediated Nitric Oxide. DOI: 10.3390/ijms17111777 ; PMID: 27792144
- Chromate alters root system architecture and activates expression of genes involved in iron homeostasis and signaling in Arabidopsis thaliana. DOI: 10.1007/s11103-014-0210-0 ; PMID: 24928490
- Mediator subunit 16 functions in the regulation of iron uptake gene expression in Arabidopsis. DOI: 10.1111/nph.12860 ; PMID: 24889527
- OPT3 is a component of the iron-signaling network between leaves and roots and misregulation of OPT3 leads to an over-accumulation of cadmium in seeds. DOI: 10.1093/mp/ssu067 ; PMID: 24880337
- The high-affinity metal Transporters NRAMP1 and IRT1 Team up to Take up Iron under Sufficient Metal Provision. DOI: 10.1038/srep37222 ; PMID: 27849020
- Ethylene response factor AtERF72 negatively regulates Arabidopsis thaliana response to iron deficiency. DOI: 10.1016/j.bbrc.2017.04.014 ; PMID: 28390898
- Fe-deficiency-induced expression of bHLH104 enhances Fe-deficiency tolerance of Arabidopsis thaliana. DOI: 10.1007/s00425-017-2703-y ; PMID: 28451750
- Genome-wide analysis of gene expression profiling revealed that COP9 signalosome is essential for correct expression of Fe homeostasis genes in Arabidopsis. DOI: 10.1007/s10534-017-0036-8 ; PMID: 28744713
- The ethylene response factor AtERF4 negatively regulates the iron deficiency response in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0186580 ; PMID: 29045490
- Arabidopsis Pollen Fertility Requires the Transcription Factors CITF1 and SPL7 That Regulate Copper Delivery to Anthers and Jasmonic Acid Synthesis. DOI: 10.1105/tpc.17.00363 ; PMID: 29114014
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Metal Sensing by the IRT1 Transporter-Receptor Orchestrates Its Own Degradation and Plant Metal Nutrition. DOI: 10.1016/j.molcel.2018.02.009 ; PMID: 29547723
- A FIT-binding protein is involved in modulating iron and zinc homeostasis in Arabidopsis. DOI: 10.1111/pce.13321 ; PMID: 29677391
- Four IVa bHLH Transcription Factors Are Novel Interactors of FIT and Mediate JA Inhibition of Iron Uptake in Arabidopsis. DOI: 10.1016/j.molp.2018.06.005 ; PMID: 29960107
- The central circadian clock proteins CCA1 and LHY regulate iron homeostasis in Arabidopsis. DOI: 10.1111/jipb.12696 ; PMID: 29989313
- The Putative Peptide Gene FEP1 Regulates Iron Deficiency Response in Arabidopsis. DOI: 10.1093/pcp/pcy145 ; PMID: 30032190
- Arabidopsis and rice showed a distinct pattern in ZIPs genes expression profile in response to Cd stress. DOI: 10.1186/s40529-018-0238-6 ; PMID: 30255457
- Small-Molecules Selectively Modulate Iron-Deficiency Signaling Networks in Arabidopsis. DOI: 10.3389/fpls.2019.00008 ; PMID: 30766541
- The R2R3-MYB Transcription Factor MYB49 Regulates Cadmium Accumulation. DOI: 10.1104/pp.18.01380 ; PMID: 30782964
- Expression of the Tobacco Non-symbiotic Class 1 Hemoglobin Gene Hb1 Reduces Cadmium Levels by Modulating Cd Transporter Expression Through Decreasing Nitric Oxide and ROS Level in Arabidopsis. DOI: 10.3389/fpls.2019.00201 ; PMID: 30853969
- Jasmonic acid alleviates cadmium toxicity in Arabidopsis via suppression of cadmium uptake and translocation. DOI: 10.1111/jipb.12801 ; PMID: 30912267
- Calcium-Promoted Interaction between the C2-Domain Protein EHB1 and Metal Transporter IRT1 Inhibits Arabidopsis Iron Acquisition. DOI: 10.1104/pp.19.00163 ; PMID: 31040174
- NRAMP1 promotes iron uptake at the late stage of iron deficiency in poplars. DOI: 10.1093/treephys/tpz055 ; PMID: 31115467
- PRC2-Mediated H3K27me3 Contributes to Transcriptional Regulation of FIT-Dependent Iron Deficiency Response. DOI: 10.3389/fpls.2019.00627 ; PMID: 31156682
- Rhizobacteria-Mediated Activation of the Fe Deficiency Response in Arabidopsis Roots: Impact on Fe Status and Signaling. DOI: 10.3389/fpls.2019.00909 ; PMID: 31354776
- The iron deficiency response in Arabidopsis thaliana requires the phosphorylated transcription factor URI. DOI: 10.1073/pnas.1916892116 ; PMID: 31776249
- Abscisic acid (ABA)-importing transporter 1 (AIT1) contributes to the inhibition of Cd accumulation via exogenous ABA application in Arabidopsis. DOI: 10.1016/j.jhazmat.2020.122189 ; PMID: 32044630
- Alteration of iron responsive gene expression in Arabidopsis glutaredoxin S17 loss of function plants with or without iron stress. DOI: 10.1080/15592324.2020.1758455 ; PMID: 32351167
- di-Cysteine Residues of the Arabidopsis thaliana HMA4 C-Terminus Are Only Partially Required for Cadmium Transport. DOI: 10.3389/fpls.2020.00560 ; PMID: 32528485
- Further insights into the role of bHLH121 in the regulation of iron homeostasis in Arabidopsis thaliana. DOI: 10.1080/15592324.2020.1795582 ; PMID: 32692954
- Sulphur availability modulates Arabidopsis thaliana responses to iron deficiency. DOI: 10.1371/journal.pone.0237998 ; PMID: 32817691
- Dynamic Control of the High-Affinity Iron Uptake Complex in Root Epidermal Cells. DOI: 10.1104/pp.20.00234 ; PMID: 32873629
- The kinase CIPK11 functions as a positive regulator in cadmium stress response in Arabidopsis. DOI: 10.1016/j.gene.2020.145372 ; PMID: 33346096
- IRT1 and ZIP2 were involved in exogenous hydrogen-rich water-reduced cadmium accumulation in Brassica chinensis and Arabidopsis thaliana. DOI: 10.1016/j.jhazmat.2020.124599 ; PMID: 33360184
- Comparative Study of Several Fe Deficiency Responses in the Arabidopsis thaliana Ethylene Insensitive Mutants ein2-1 and ein2-5. DOI: 10.3390/plants10020262 ; PMID: 33573082
- PAP/SAL1 retrograde signaling pathway modulates iron deficiency response in alkaline soils. DOI: 10.1016/j.plantsci.2020.110808 ; PMID: 33568304
- Knockout of FER decreases cadmium concentration in roots of Arabidopsis thaliana by inhibiting the pathway related to iron uptake. DOI: 10.1016/j.scitotenv.2021.149285 ; PMID: 34340090
- Enhanced Iron Uptake in Plants by Volatile Emissions of Rahnella aquatilis JZ-GX1. DOI: 10.3389/fpls.2021.704000 ; PMID: 34394158
- bHLH11 inhibits bHLH IVc proteins by recruiting the TOPLESS/TOPLESS-RELATED corepressors. DOI: 10.1093/plphys/kiab540 ; PMID: 34894263
- The role of NADPH oxidases in regulating leaf gas exchange and ion homeostasis in Arabidopsis plants under cadmium stress. DOI: 10.1016/j.jhazmat.2022.128217 ; PMID: 35077969
- Loss-of-function mutations in the ERF96 gene enhance iron-deficient tolerance in Arabidopsis. DOI: 10.1016/j.plaphy.2022.02.002 ; PMID: 35158317
- MIR164b represses iron uptake by regulating the NAC domain transcription factor5-Nuclear Factor Y, Subunit A8 module in Arabidopsis. DOI: 10.1093/plphys/kiac114 ; PMID: 35285505
- MNB1 gene is involved in regulating the iron-deficiency stress response in Arabidopsis thaliana. DOI: 10.1186/s12870-022-03553-5 ; PMID: 35346040
- Systemic Regulation of Iron Acquisition by Arabidopsis in Environments with Heterogeneous Iron Distributions. DOI: 10.1093/pcp/pcac049 ; PMID: 35445268
- Crosstalk Between Iron and Sulfur Homeostasis Networks in Arabidopsis. DOI: 10.3389/fpls.2022.878418 ; PMID: 35755678
- ZAT10 plays dual roles in cadmium uptake and detoxification in Arabidopsis. DOI: 10.3389/fpls.2022.994100 ; PMID: 36110357
- Exogenous abscisic acid alleviates Cd toxicity in Arabidopsis thaliana by inhibiting Cd uptake, translocation and accumulation, and promoting Cd chelation and efflux. DOI: 10.1016/j.plantsci.2022.111464 ; PMID: 36130666
- Differential metal sensing and metal-dependent degradation of the broad spectrum root metal transporter IRT1. DOI: 10.1111/tpj.16010 ; PMID: 36269689
- SEC14-GOLD protein PATELLIN2 binds IRON-REGULATED TRANSPORTER1 linking root iron uptake to vitamin E. DOI: 10.1093/plphys/kiac563 ; PMID: 36493393
- Regulatory module WRKY33-ATL31-IRT1 mediates cadmium tolerance in Arabidopsis. DOI: 10.1111/pce.14558 ; PMID: 36738191
- The transcription factor MYC1 interacts with FIT to negatively regulate iron homeostasis in Arabidopsis thaliana. DOI: 10.1111/tpj.16130 ; PMID: 36721966
- The overexpression of LOW PHOSPHATE ROOT 1 (LPR1) negatively regulates Arabidopsis growth in response to Cadmium (Cd) stress. DOI: 10.1016/j.plaphy.2023.02.003 ; PMID: 36774911
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
Gene Resources
- UniProt: A0A178UTD9
- EMBL: CACRSJ010000109, CACSHJ010000095, LUHQ01000004
- AlphaFoldDB: A0A178UTD9
- EnsemblPlants: AT4G19690.2
- Gramene: AT4G19690.2
- KEGG: ath:AT4G19690
- Orthologous matrix: EATSDIC
- ExpressionAtlas: AT4G19690
- InterPro: IPR003689, IPR004698
- PANTHER: PTHR11040, PTHR11040:SF183
- OrthoDB: A0A178UTD9
Sequences
cDNA Sequence
- >AT4G19690.1
CCAGCACACATTACTATATAAACCGATTCATCTAGTAAGTCCAAAGTCACACAAACATTAAACAATCTAAACACACAACAATCCAAAAGAAAAAAGAAAAAAAAAAAAAATGGCTTCAAATTCAGCACTTCTCATGAAAACAATCTTCCTCGTACTCATTTTTGTCTCTTTTGCAATCTCTCCAGCAACTTCAACTGCGCCGGAAGAATGTGGAAGCGAGTCAGCGAACCCGTGCGTCAACAAAGCTAAAGCTTTGCCTCTCAAAGTCATAGCAATCTTCGTAATCCTCATTGCAAGCATGATTGGTGTTGGAGCTCCTCTCTTTAGCCGTAACGTTTCGTTCCTCCAACCAGACGGAAACATCTTCACTATCATTAAGTGTTTCGCCTCCGGGATCATCCTTGGAACCGGTTTTATGCACGTTTTACCTGATTCTTTCGAAATGTTGTCATCTATATGTCTTGAAGAGAACCCGTGGCATAAATTTCCTTTCTCCGGATTTCTCGCTATGTTATCGGGTCTAATCACTCTAGCCATTGACTCCATGGCCACGAGCCTATACACCAGCAAGAACGCAGTTGGTATCATGCCCCATGGTCATGGTCATGGTCACGGCCCCGCAAATGATGTTACCTTACCAATAAAAGAAGATGATTCGTCAAATGCACAGCTCTTGCGATACCGAGTCATTGCCATGGTTCGTACGCACATATATACATACCGAATATCATTGTATTTTAAATGACATATTACCGAATACATAGGTATATCTAACTTTCTAC - >AT4G19690.2
CCAGCACACATTACTATATAAACCGATTCATCTAGTAAGTCCAAAGTCACACAAACATTAAACAATCTAAACACACAACAATCCAAAAGAAAAAAGAAAAAAAAAAAAAATGGCTTCAAATTCAGCACTTCTCATGAAAACAATCTTCCTCGTACTCATTTTTGTCTCTTTTGCAATCTCTCCAGCAACTTCAACTGCGCCGGAAGAATGTGGAAGCGAGTCAGCGAACCCGTGCGTCAACAAAGCTAAAGCTTTGCCTCTCAAAGTCATAGCAATCTTCGTAATCCTCATTGCAAGCATGATTGGTGTTGGAGCTCCTCTCTTTAGCCGTAACGTTTCGTTCCTCCAACCAGACGGAAACATCTTCACTATCATTAAGTGTTTCGCCTCCGGGATCATCCTTGGAACCGGTTTTATGCACGTTTTACCTGATTCTTTCGAAATGTTGTCATCTATATGTCTTGAAGAGAACCCGTGGCATAAATTTCCTTTCTCCGGATTTCTCGCTATGTTATCGGGTCTAATCACTCTAGCCATTGACTCCATGGCCACGAGCCTATACACCAGCAAGAACGCAGTTGGTATCATGCCCCATGGTCATGGTCATGGTCACGGCCCCGCAAATGATGTTACCTTACCAATAAAAGAAGATGATTCGTCAAATGCACAGCTCTTGCGATACCGAGTCATTGCCATGGTTCGTACGCACATATATACATACCGAATATCATTGTATTTTAAATGACATATTACCGAATACATAGGTATATCTAACTTTCTAC
CDS Sequence
Protein Sequence