Information report for AT4G19680
Gene Details
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Functional Descriptions
- PO:0006036 — root epidermis — epidermis de la raíz (Spanish, exact), 根表皮 (Japanese, exact), epiblem (related), rhizodermis (related)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
Functional Keywords
Literature and News
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
- Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis. DOI: 10.1074/jbc.M309338200 ; PMID: 13129917
- Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors. DOI: 10.1046/j.1365-313x.2003.01960.x ; PMID: 14690510
- The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response. DOI: 10.1105/tpc.104.024315 ; PMID: 15539473
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase. DOI: 10.1105/tpc.105.038653 ; PMID: 16766693
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Comparative gene mapping in Arabidopsis lyrata chromosomes 6 and 7 and A. thaliana chromosome IV: evolutionary history, rearrangements and local recombination rates. DOI: 10.1017/S0016672306008287 ; PMID: 17014743
- Expression and functional analysis of metal transporter genes in two contrasting ecotypes of the hyperaccumulator Thlaspi caerulescens. DOI: 10.1093/jxb/erm025 ; PMID: 17404382
- Arabidopsis IRT2 cooperates with the high-affinity iron uptake system to maintain iron homeostasis in root epidermal cells. DOI: 10.1007/s00425-009-0904-8 ; PMID: 19252923
- Differential expression and regulation of iron-regulated metal transporters in Arabidopsis halleri and Arabidopsis thaliana–the role in zinc tolerance. DOI: 10.1111/j.1469-8137.2010.03606.x ; PMID: 21219335
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Role of Fe-responsive genes in bioreduction and transport of ionic gold to roots of Arabidopsis thaliana during synthesis of gold nanoparticles. DOI: 10.1016/j.plaphy.2014.09.013 ; PMID: 25289518
- Arabidopsis and rice showed a distinct pattern in ZIPs genes expression profile in response to Cd stress. DOI: 10.1186/s40529-018-0238-6 ; PMID: 30255457
- ZAT10 plays dual roles in cadmium uptake and detoxification in Arabidopsis. DOI: 10.3389/fpls.2022.994100 ; PMID: 36110357
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
Gene Resources
- UniProt: A0A178UYS5
- EMBL: CACSHJ010000095, LUHQ01000004
- AlphaFoldDB: A0A178UYS5
- EnsemblPlants: AT4G19680.2
- Gramene: AT4G19680.2
- KEGG: ath:AT4G19680
- Orthologous matrix: CDIGLEN
- ExpressionAtlas: AT4G19680
- InterPro: IPR003689, IPR004698
- PANTHER: PTHR11040, PTHR11040:SF145
- OrthoDB: A0A178UYS5
Sequences
cDNA Sequence
- >AT4G19680.1
TTCAAACATCATATATTATAAAACAATCTCAATACTAATGGCTACTACCAAGCTCGTCTACATTCTCCTCATCCTATTCACCTTCACCGTATCTCCGGCGATCTCAACGGCCCCGGAACATTGTGATAGCGGCTTTGATAACCCGTGCATCAACAAAGCTAAGGCTTTACCACTCAAAATCGTAGCCATTGTTGCCATACTTACAACAAGCTTGATAGGCGTGACCTCTCCTCTTTTCAGCCGTTACATTTCGTTCCTCCGTCCCGATGGCAATGGTTTCATGATCGTCAAATGTTTTTCTTCTGGAATCATCCTTGGAACCGGTTTCATGCACGTCTTGCCTGACTCTTTCGAGATGTTGTCATCGAAATGTCTTAGTGATAATCCGTGGCATAAGTTCCCTTTTGCGGGTTTTGTCGCTATGATGTCCGGTCTAGTCACTCTAGCCATTGACTCCATTACCACCAGCCTTTATACCGGTAAGAACTCAGTCGGACCAGTGCCTGATGAAGAGTATGGCATTGATCAAGAGAAAGCGATTCACATGGTAGGCCACAATCATAGTCACGGTCATGGTGTAGTGCTAGCAACTAAAGATGATGGACAGCTTTTGCGCTACCAAGTCATTGCCATGGTATTGGAGGTTGGCATTTTATTTCATTCTGTGGTCATTGGACTATCTCTAGGAGCAACTAATGATTCATGTACCATTAAAGGACTCATCATAGCTCTTTGCTTCCATCACTTGTTCGAAGGCATAGGTCTTGGTGGCTGCATCCTCCAGGTACGAATATACATTCATACTATATAGTTTATGTCTCTTATATCAATTAGAAATTTACGTTCATATGTATATAATTTATGTTAACAGGCAGATTTTACAAATGTGAAGAAGTTCTTGATGGCATTCTTTTTCACTGGAACAACACCTTGTGGTATCTTTCTTGGAATCGCATTGTCGAGTATCTATAGAGATAACAGTCCAACCGCGTTGATTACGATTGGACTGTTAAATGCTTGCTCGGCCGGAATGCTCATCTACATGGCCCTCGTCGACCTTCTAGCTACCGAGTTCATGGGGTCAATGCTCCAAGGTAGCATCAAACTTCAGATCAAGTGCTTCACGGCGGCTTTGCTTGGCTGCGCCGTAATGTCGGTCGTCGCCGTGTGGGCTTAAACACTCTTTCAACATAATCAATAAATTATTTGATTTATTATTCAAGGCGACAAATACTTTCGCCTTTGTATATTTGAGTTTTTGTTTTTAAGTTTGATTCATTTATTAGTTTGTATAGTGCATGTAAGCGTTTGAAAGAAATTTCTTTTTATGACATTGTAAATTTATTTTTATGAATGCGATGTTTACTTTCTTCTTTGGAATGACATGTATTTAA - >AT4G19680.2
TTCAAACATCATATATTATAAAACAATCTCAATACTAATGGCTACTACCAAGCTCGTCTACATTCTCCTCATCCTATTCACCTTCACCGTATCTCCGGCGATCTCAACGGCCCCGGAACATTGTGATAGCGGCTTTGATAACCCGTGCATCAACAAAGCTAAGGCTTTACCACTCAAAATCGTAGCCATTGTTGCCATACTTACAACAAGCTTGATAGGCGTGACCTCTCCTCTTTTCAGCCGTTACATTTCGTTCCTCCGTCCCGATGGCAATGGTTTCATGATCGTCAAATGTTTTTCTTCTGGAATCATCCTTGGAACCGGTTTCATGCACGTCTTGCCTGACTCTTTCGAGATGTTGTCATCGAAATGTCTTAGTGATAATCCGTGGCATAAGTTCCCTTTTGCGGGTTTTGTCGCTATGATGTCCGGTCTAGTCACTCTAGCCATTGACTCCATTACCACCAGCCTTTATACCGGTAAGAACTCAGTCGGACCAGTGCCTGATGAAGAGTATGGCATTGATCAAGAGAAAGCGATTCACATGGTAGGCCACAATCATAGTCACGGTCATGGTGTAGTGCTAGCAACTAAAGATGATGGACAGCTTTTGCGCTACCAAGTCATTGCCATGGTATTGGAGGTTGGCATTTTATTTCATTCTGTGGTCATTGGACTATCTCTAGGAGCAACTAATGATTCATGTACCATTAAAGGACTCATCATAGCTCTTTGCTTCCATCACTTGTTCGAAGGCATAGGTCTTGGTGGCTGCATCCTCCAGGTACGAATATACATTCATACTATATAGTTTATGTCTCTTATATCAATTAGAAATTTACGTTCATATGTATATAATTTATGTTAACAGGCAGATTTTACAAATGTGAAGAAGTTCTTGATGGCATTCTTTTTCACTGGAACAACACCTTGTGGTATCTTTCTTGGAATCGCATTGTCGAGTATCTATAGAGATAACAGTCCAACCGCGTTGATTACGATTGGACTGTTAAATGCTTGCTCGGCCGGAATGCTCATCTACATGGCCCTCGTCGACCTTCTAGCTACCGAGTTCATGGGGTCAATGCTCCAAGGTAGCATCAAACTTCAGATCAAGTGCTTCACGGCGGCTTTGCTTGGCTGCGCCGTAATGTCGGTCGTCGCCGTGTGGGCTTAAACACTCTTTCAACATAATCAATAAATTATTTGATTTATTATTCAAGGCGACAAATACTTTCGCCTTTGTATATTTGAGTTTTTGTTTTTAAGTTTGATTCATTTATTAGTTTGTATAGTGCATGTAAGCGTTTGAAAGAAATTTCTTTTTATGACATTGTAAATTTATTTTTATGAATGCGATGTTTACTTTCTTCTTTGGAATGACATGTATTTAA
CDS Sequence
Protein Sequence