Information report for AT4G19640
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis Rab GTPase family: another enigma variation. DOI: 10.1016/s1369-5266(02)00307-2 ; PMID: 12393015
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Endocytosis and degradation of BOR1, a boron transporter of Arabidopsis thaliana, regulated by boron availability. DOI: 10.1073/pnas.0502060102 ; PMID: 16103374
- The Arabidopsis AAA ATPase SKD1 is involved in multivesicular endosome function and interacts with its positive regulator LYST-INTERACTING PROTEIN5. DOI: 10.1105/tpc.106.049346 ; PMID: 17468262
- VPS9a, the common activator for two distinct types of Rab5 GTPases, is essential for the development of Arabidopsis thaliana. DOI: 10.1105/tpc.107.053876 ; PMID: 18055610
- Different subcellular localizations and functions of Arabidopsis myosin VIII. DOI: 10.1186/1471-2229-8-3 ; PMID: 18179725
- Rab-A2 and Rab-A3 GTPases define a trans-golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate. DOI: 10.1105/tpc.107.052001 ; PMID: 18239134
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The AAA-type ATPase AtSKD1 contributes to vacuolar maintenance of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2010.04310.x ; PMID: 20663085
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Mechanisms governing the endosomal membrane recruitment of the core retromer in Arabidopsis. DOI: 10.1074/jbc.M112.440503 ; PMID: 23362252
- Myrosin cell development is regulated by endocytosis machinery and PIN1 polarity in leaf primordia of Arabidopsis thaliana. DOI: 10.1105/tpc.114.131441 ; PMID: 25428982
- Identification of Regulatory and Cargo Proteins of Endosomal and Secretory Pathways in Arabidopsis thaliana by Proteomic Dissection. DOI: 10.1074/mcp.M115.050286 ; PMID: 25900983
- Phosphatidylinositol 3-Phosphate 5-Kinase, FAB1/PIKfyve Kinase Mediates Endosome Maturation to Establish Endosome-Cortical Microtubule Interaction in Arabidopsis. DOI: 10.1104/pp.15.01368 ; PMID: 26353760
- Physical, Functional and Genetic Interactions between the BEACH Domain Protein SPIRRIG and LIP5 and SKD1 and Its Role in Endosomal Trafficking to the Vacuole in Arabidopsis. DOI: 10.3389/fpls.2017.01969 ; PMID: 29209342
- Integration of two RAB5 groups during endosomal transport in plants. DOI: 10.7554/eLife.34064 ; PMID: 29749929
- Nonselective Chemical Inhibition of Sec7 Domain-Containing ARF GTPase Exchange Factors. DOI: 10.1105/tpc.18.00145 ; PMID: 30018157
- AtTRAPPC11/ROG2: A Role for TRAPPs in Maintenance of the Plant Trans-Golgi Network/Early Endosome Organization and Function. DOI: 10.1105/tpc.19.00110 ; PMID: 31175171
- A Conditional Mutation in SCD1 Reveals Linkage Between PIN Protein Trafficking, Auxin Transport, Gravitropism, and Lateral Root Initiation. DOI: 10.3389/fpls.2020.00910 ; PMID: 32733502
- Non-steroidal Anti-inflammatory Drugs Target TWISTED DWARF1-Regulated Actin Dynamics and Auxin Transport-Mediated Plant Development. DOI: 10.1016/j.celrep.2020.108463 ; PMID: 33264621
- The phosphatidylinositol 3-phosphate effector FYVE3 regulates FYVE2-dependent autophagy in Arabidopsis thaliana. DOI: 10.3389/fpls.2023.1160162 ; PMID: 37008475
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Gene Resources
- UniProt: A0A1P8B381
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B381
- EnsemblPlants: AT4G19640.3
- Gramene: AT4G19640.3
- ExpressionAtlas: AT4G19640
- InterPro: IPR001806, IPR005225, IPR027417
- PANTHER: PTHR47978
- SUPFAM: SSF52540
- PROSITE: PS51419, PS51421
- Gene3D: 3.40.50.300
- OrthoDB: A0A1P8B381
- SWISS-MODEL: A0A1P8B381
- Conserved Domain Database: cd01860
Sequences
cDNA Sequence
- >AT4G19640.3
TAGAGGACTTAACCCAAAAAGACTTGGGCCTAAATCTACATTGGGCCAACGATTATATTCGTAGTTTTTTCGTGTCATATTAACTTGCCGTGTAATATTTGTTTACTTGTATTTTTTGTTAGTTCTAGAAAGAAAGCAACATTAATTGAGGAGGAGGAGATTGGTTGTTGTTGACGACGCGTTTCCGCTCACTAATTTTTTTTAACCTTTTTGTGTCTCCGTCGTCTTTTGATCTTCAATCTCAGTTTTGAGCTGAAGATTATCGTATCGACCTGCGATTCTCTTCAGATCGATAATCCATGGCTGCAGCTGGAAACAAGAGCATTAACGCCAAATTGGTGTTGCTTGGAGATGTTGGTGCTGGAAAATCAAGTCTTGTGTTACGGTTTGTCAAAGATCAGTTTGTTGAATTCCAGGAATCAACCATTGGTGCTGCTTTTTTCTCACAAACGTTAGCTGTGAACGATGCCACTGTGAAGTTTGAGATTTGGGATACAGCGGGTCAGGAACGGTACCATAGTTTGGCTCCAATGTACTACAGAGGTGCTGCTGCTGCAATCATTGTTTTTGATGTTACGAATCAGGCTTCGTTTGAGAGGGCAAAGAAATGGGTTCAGGAACTGCAGGCACAAGGTAACCCTAATATGGTCATGGCCCTTGCTGGAAACAAATCTGATTTATTAGATGCAAGGAAGGTGACAGCAGAGGTAAGCAAGTCCTTCTCTGTCCTGACTGATTTTTCTCATTATGAGGTTAGGATTTTACTGTCAAATATAAAGTTGAGCTATGTGTGTGTAATAGCTGATCATCATGTTGAACGTGTTAAGCTGTATTTTGAAATTTCACATGTCACGTTTGACAGGAGTCAGAACATTAGGTGATATCTCTTTGTTGTAAAATTACAATCTACCTTATTGACATTAACCTGACAAACCAAGCCACCTAAACCGACCCCACACACTTAACAAATCATAAATTAGGCTTGTTGTATAGACAGTTAATGTTTCATTAAGAAGTATAGTGCAGTTTTCTCTAACCAGCTTTGGAGAATGATATATATGTTTTCATATGACCTTTCTTATCCCGCAATCCCGCAAGTCCATATTTTACTGTCTTATGCCAAAAGCCTAGATTTTAGATAAGTAGCATTTCTCAAGACTGATCCTTTTGAAGTATCTGTTAGAATCATTTACGTTGTGCATTAAAGTTCAGTTGTGACTTGCAAAGGACAGAAAAACACAGTTCTGTTGTGTGTCAGAGATATGCATCTCTAATGAAGTAGACATTATATACATAGACAATGATGCACAAACATATGCTCAGGAAAACGGTCTTTTCTTCATGGAAACTTCAGCAAAAACCGCTACTAATGTCAAAGAGATATTCTATGAAATCGCAAGAAGGCTACCGCGAGTACAGCCAACAGAAAACCCAACAGGAATGGTTCTGCCAGACAGGGCCATGGATAGGGCAGTGAGCTCATCTTGTTGTGCTTAGTTATATTGTGTAATGGCACACACTTCTCTTAAAAAGAGATCTTTTGGTCACTTTAAAGTTATGGACTTCTGTGTTTGCGTCTCTTTGCTTTGTTTTACGTATTTGAGATTTGATCTCCACTATTTTGTAAATAAATCTAATACTCAACTAAGTAACTAAGTGCGTGAGGGGGCTATGGATCCATTTGTCATAACGCAAATATTTTCAAGTTATAGAAACTCTAAAATAAACTCAAACATGCCT - >AT4G19640.2
TAGAGGACTTAACCCAAAAAGACTTGGGCCTAAATCTACATTGGGCCAACGATTATATTCGTAGTTTTTTCGTGTCATATTAACTTGCCGTGTAATATTTGTTTACTTGTATTTTTTGTTAGTTCTAGAAAGAAAGCAACATTAATTGAGGAGGAGGAGATTGGTTGTTGTTGACGACGCGTTTCCGCTCACTAATTTTTTTTAACCTTTTTGTGTCTCCGTCGTCTTTTGATCTTCAATCTCAGTTTTGAGCTGAAGATTATCGTATCGACCTGCGATTCTCTTCAGATCGATAATCCATGGCTGCAGCTGGAAACAAGAGCATTAACGCCAAATTGGTGTTGCTTGGAGATGTTGGTGCTGGAAAATCAAGTCTTGTGTTACGGTTTGTCAAAGATCAGTTTGTTGAATTCCAGGAATCAACCATTGGTGCTGCTTTTTTCTCACAAACGTTAGCTGTGAACGATGCCACTGTGAAGTTTGAGATTTGGGATACAGCGGGTCAGGAACGGTACCATAGTTTGGCTCCAATGTACTACAGAGGTGCTGCTGCTGCAATCATTGTTTTTGATGTTACGAATCAGGCTTCGTTTGAGAGGGCAAAGAAATGGGTTCAGGAACTGCAGGCACAAGGTAACCCTAATATGGTCATGGCCCTTGCTGGAAACAAATCTGATTTATTAGATGCAAGGAAGGTGACAGCAGAGGTAAGCAAGTCCTTCTCTGTCCTGACTGATTTTTCTCATTATGAGGTTAGGATTTTACTGTCAAATATAAAGTTGAGCTATGTGTGTGTAATAGCTGATCATCATGTTGAACGTGTTAAGCTGTATTTTGAAATTTCACATGTCACGTTTGACAGGAGTCAGAACATTAGGTGATATCTCTTTGTTGTAAAATTACAATCTACCTTATTGACATTAACCTGACAAACCAAGCCACCTAAACCGACCCCACACACTTAACAAATCATAAATTAGGCTTGTTGTATAGACAGTTAATGTTTCATTAAGAAGTATAGTGCAGTTTTCTCTAACCAGCTTTGGAGAATGATATATATGTTTTCATATGACCTTTCTTATCCCGCAATCCCGCAAGTCCATATTTTACTGTCTTATGCCAAAAGCCTAGATTTTAGATAAGTAGCATTTCTCAAGACTGATCCTTTTGAAGTATCTGTTAGAATCATTTACGTTGTGCATTAAAGTTCAGTTGTGACTTGCAAAGGACAGAAAAACACAGTTCTGTTGTGTGTCAGAGATATGCATCTCTAATGAAGTAGACATTATATACATAGACAATGATGCACAAACATATGCTCAGGAAAACGGTCTTTTCTTCATGGAAACTTCAGCAAAAACCGCTACTAATGTCAAAGAGATATTCTATGAAATCGCAAGAAGGCTACCGCGAGTACAGCCAACAGAAAACCCAACAGGAATGGTTCTGCCAGACAGGGCCATGGATAGGGCAGTGAGCTCATCTTGTTGTGCTTAGTTATATTGTGTAATGGCACACACTTCTCTTAAAAAGAGATCTTTTGGTCACTTTAAAGTTATGGACTTCTGTGTTTGCGTCTCTTTGCTTTGTTTTACGTATTTGAGATTTGATCTCCACTATTTTGTAAATAAATCTAATACTCAACTAAGTAACTAAGTGCGTGAGGGGGCTATGGATCCATTTGTCATAACGCAAATATTTTCAAGTTATAGAAACTCTAAAATAAACTCAAACATGCCT - >AT4G19640.1
TAGAGGACTTAACCCAAAAAGACTTGGGCCTAAATCTACATTGGGCCAACGATTATATTCGTAGTTTTTTCGTGTCATATTAACTTGCCGTGTAATATTTGTTTACTTGTATTTTTTGTTAGTTCTAGAAAGAAAGCAACATTAATTGAGGAGGAGGAGATTGGTTGTTGTTGACGACGCGTTTCCGCTCACTAATTTTTTTTAACCTTTTTGTGTCTCCGTCGTCTTTTGATCTTCAATCTCAGTTTTGAGCTGAAGATTATCGTATCGACCTGCGATTCTCTTCAGATCGATAATCCATGGCTGCAGCTGGAAACAAGAGCATTAACGCCAAATTGGTGTTGCTTGGAGATGTTGGTGCTGGAAAATCAAGTCTTGTGTTACGGTTTGTCAAAGATCAGTTTGTTGAATTCCAGGAATCAACCATTGGTGCTGCTTTTTTCTCACAAACGTTAGCTGTGAACGATGCCACTGTGAAGTTTGAGATTTGGGATACAGCGGGTCAGGAACGGTACCATAGTTTGGCTCCAATGTACTACAGAGGTGCTGCTGCTGCAATCATTGTTTTTGATGTTACGAATCAGGCTTCGTTTGAGAGGGCAAAGAAATGGGTTCAGGAACTGCAGGCACAAGGTAACCCTAATATGGTCATGGCCCTTGCTGGAAACAAATCTGATTTATTAGATGCAAGGAAGGTGACAGCAGAGGTAAGCAAGTCCTTCTCTGTCCTGACTGATTTTTCTCATTATGAGGTTAGGATTTTACTGTCAAATATAAAGTTGAGCTATGTGTGTGTAATAGCTGATCATCATGTTGAACGTGTTAAGCTGTATTTTGAAATTTCACATGTCACGTTTGACAGGAGTCAGAACATTAGGTGATATCTCTTTGTTGTAAAATTACAATCTACCTTATTGACATTAACCTGACAAACCAAGCCACCTAAACCGACCCCACACACTTAACAAATCATAAATTAGGCTTGTTGTATAGACAGTTAATGTTTCATTAAGAAGTATAGTGCAGTTTTCTCTAACCAGCTTTGGAGAATGATATATATGTTTTCATATGACCTTTCTTATCCCGCAATCCCGCAAGTCCATATTTTACTGTCTTATGCCAAAAGCCTAGATTTTAGATAAGTAGCATTTCTCAAGACTGATCCTTTTGAAGTATCTGTTAGAATCATTTACGTTGTGCATTAAAGTTCAGTTGTGACTTGCAAAGGACAGAAAAACACAGTTCTGTTGTGTGTCAGAGATATGCATCTCTAATGAAGTAGACATTATATACATAGACAATGATGCACAAACATATGCTCAGGAAAACGGTCTTTTCTTCATGGAAACTTCAGCAAAAACCGCTACTAATGTCAAAGAGATATTCTATGAAATCGCAAGAAGGCTACCGCGAGTACAGCCAACAGAAAACCCAACAGGAATGGTTCTGCCAGACAGGGCCATGGATAGGGCAGTGAGCTCATCTTGTTGTGCTTAGTTATATTGTGTAATGGCACACACTTCTCTTAAAAAGAGATCTTTTGGTCACTTTAAAGTTATGGACTTCTGTGTTTGCGTCTCTTTGCTTTGTTTTACGTATTTGAGATTTGATCTCCACTATTTTGTAAATAAATCTAATACTCAACTAAGTAACTAAGTGCGTGAGGGGGCTATGGATCCATTTGTCATAACGCAAATATTTTCAAGTTATAGAAACTCTAAAATAAACTCAAACATGCCT
CDS Sequence
Protein Sequence