Information report for AT4G19130
Gene Details
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Functional Descriptions
- GO:0008270 — enables — zinc ion binding
- GO:0003684 — enables — damaged DNA binding
- GO:0007004 — involved in — telomere maintenance via telomerase
- GO:0006289 — involved in — nucleotide-excision repair
- GO:0000724 — involved in — double-strand break repair via homologous recombination
- GO:0051321 — involved in — meiotic cell cycle
- GO:0005662 — part of — DNA replication factor A complex
- GO:0005634 — located in — nucleus
- GO:0043047 — enables — single-stranded telomeric DNA binding
Functional Keywords
Literature and News
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- ATR and ATM play both distinct and additive roles in response to ionizing radiation. DOI: 10.1111/j.1365-313X.2006.02931.x ; PMID: 17227549
- Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. DOI: 10.1104/pp.107.101105 ; PMID: 17556508
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Genetic analysis of the Replication Protein A large subunit family in Arabidopsis reveals unique and overlapping roles in DNA repair, meiosis and DNA replication. DOI: 10.1093/nar/gkt1292 ; PMID: 24335281
- Molecular Evolution and Functional Diversification of Replication Protein A1 in Plants. DOI: 10.3389/fpls.2016.00033 ; PMID: 26858742
- Transcriptome-based biological dosimetry of gamma radiation in Arabidopsis using DNA damage response genes. DOI: 10.1016/j.jenvrad.2017.11.007 ; PMID: 29128690
- SOG1-dependent NAC103 modulates the DNA damage response as a transcriptional regulator in Arabidopsis. DOI: 10.1111/tpj.14201 ; PMID: 30554433
- Functional Diversification of Replication Protein A Paralogs and Telomere Length Maintenance in Arabidopsis. DOI: 10.1534/genetics.120.303222 ; PMID: 32532801
Gene Resources
- UniProt: A0A1P8B5B8
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B5B8
- EnsemblPlants: AT4G19130.2
- Gramene: AT4G19130.2
- Orthologous matrix: QGMLATD
- ExpressionAtlas: AT4G19130
- InterPro: IPR001878, IPR004365, IPR004591
- PANTHER: PTHR23273, PTHR23273:SF4
- SUPFAM: SSF50249
- PROSITE: PS50158
- Gene3D: 2.40.50.140
- SWISS-MODEL: A0A1P8B5B8
- Conserved Domain Database: cd04474, cd04475, cd04476
Sequences
cDNA Sequence
- >AT4G19130.2
AAGGGAGCGTAAAGTTTCCACCTTTCACTCTAGGGGCTAATCTCAAATCCTTCATCTTCTTCAACCTCTGGTCTCTGTCAATTCAAACAAATCGTTTTTCGTCTCCTCAATTTTGAATTCATTTATAAAGATTTCACCCTTTTCCTCCTCGAATCTCGAATTGCTTCTACTGATTATCCAAATTTTCTTGAGGTTTGTAACGCTTTTGAATTTGGGTTTTAGTGTCAATCTGTAATGATGGAGGTAAGTTTGACGGCGGGAGCAATCGGGAAGATAATGAATGGAGAAGTGACGACTGAAGCAGATATGATTCCGGTGTTGCAAGTGACGGATTTGAAGCAGATTATGGCTCAACAAGATCCAACAAGAGAGAGGTTTAGGATGGTGTTATCTGATGGGACATACTTGCATCAAGGAATGCTAGGAACTGATCTCAACAATCTTGTCAAAGAAGGGACTCTTCAACCCGGTTCTATTGTTAGACTTACTCGTTTCGTCGGTGATGTCATCAAGGGTCGAAGGATTGTTATTGTTCCGCAACTGGAGGTGTTAAAACAGATTTCTGATATTATCGGGCATCCTGTTCCAGGAGGAAAGCATAATGATCAACGTGGAGCAGATTCTGGTATTAAGTTTAATACAACTGAGCAACAAGGTAGTGGTATCCGTCAAGTAAACAATATCGAGCCAGGGAGAAGTAATGCAGCTATTTCACCTCAGGTTGGTGGTACTGGTTCTAGTGTTCCTGCATCAACAACACCTTCCACTCGGGCATACAGCAATCCGTCTTCAGGTAATGGAGTCACTAGGCAGGACTATGCTCGTGATCCTCCAACAAGTTATCCTCATCAGCCTCAACCACCACCACCGATGTATGCAAACAGGGGACCAGTGGCTAGGAATGAAGCACCTCCTAAGATAATTCCAGTTAATGCTCTTAGTCCATATTCAGGTAGGTGGACCATCAAGGCCAGAGTCACGAATAAAGCAGCACTTAAGCAATACAGTAATCCCCGTGGGGAAGGGAAAGTGTTCAACTTTGATCTTCTTGATGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGATCAATTCTATGACCAGATTGTTGTTGGTAATCTTTATCTTATCTCGAGGGGAAGTTTGCGGCCTGCACAAAAGAACTTTAATCATCTTCGAAATGATTACGAGATCATGCTGGATAATGCATCAACTATAAAACAATGCTATGAAGAGGATGCTGCAATTCCGCGCCATCAGTTCCATTTCCGTACCATTGGGGATATTGAGAGCATGGAGAATAACTGCATCGTTGATGTAATTGGTATTGTGTCATCTATCAGTCCTACTGTAACAATAACGAGGAAAAACGGAACTGCAACACCGAAAAGATCACTTCAGTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACTATGTGGGGTGACTTCTGCAATGCAGAAGGACAAAGGCTGCAAAGTCTTTGTGATTCTGGTGTGTTTCCGGTTCTTGCTGTTAAGGCGGGCAGGATTAGTGAATTTAATGGAAAGACAGTGAGCACCATTGGATCAAGTCAGCTGTTCATTGACCCAGATTTTGTTGAAGCTGAGAAACTGAAGAACTGGTTTGAGAGAGAAGGAAAGAGTGTCCCTTGTATCTCCTTATCTCGGGAGTTTTCCGGCAGTGGCAAAGTAGATGTTCGTAAGACAATATCTCAAATTAAAGATGAGAAACTAGGAACCTCCGAAAAACCAGACTGGATCACAGTCAGTGCCACAATTTTATACTTGAAGTTTGATAACTTCTGCTACACAGCTTGTCCTATCATGAACGGTGATCGTCCATGCAGCAAAAAGGTAACAGACAATGGAGATGGGACATGGCGGTGCGAAAAGTGTGATAAAAGCGTTGATGAATGTGACTACAGGTATATACTGCAGCTTCAGATACAGGACCATACAGATCTTACTTGCGTCACAGCATTCCAGGAGGCTGGTGAAGAGATAATGGGCATATCTGCTAAAGATTTGTATTATGTGAAGAATGAACACAAGGATGAGGAAAAATTCGAAGATATCATCCGTAAGGTTGCTTTTACCAAGTACAACTTCAAGCTGAAGGTAAAAGAAGAAACATTCAGCGACGAACAGCGTGTGAAAGCAACAGTTGTGAAAGTGGACAAGCTAAACTATTCAGCAGATACCAGGACTATGTTAGGTGCTATGGATAAACTCAGGACCAGAGATGCAAATTCTCTTCCCATTAACCCAGAAGGATCCGATTACAATGCTGATGTGGTTAATACTGGTATAGGAAGCTCAGGAACCAGAGATCCCTCATCGGTCCAAAGAAGGGATTTCGGTTTACATGCGCATCAATCGGGTCAATCTGGGAATCACTATAGTGGTGGTGGTGCTACTACTAGCTGCAATGTCTGTGGAAACAGTGGTCATGTTTCTGCAAAGTGTCCAGGCGCTACTAAGCCGCAAGAGCAAGGGCAGTACATGGGTGGCTCTTACAGAGGCACGACGGGGAGTTATGGAGGAGGACTACCGAGACAACATGTTGGAAGCTACTGAGAGTCATAATCATCATCATCTGATGATGCTCTCACTCTTTTTTTTTGTAGACTTTTGTTTTGGTAGAATTAACTAATGCCAAACTTTTCTGAAGTCTTTTAAGGTTATTTAAGCATATTAGGTTCTCTTGTTTGGTTTCTTGAAAATATCAAACTCGTTTTGTGATATCTTTTTTTAAAAGTTTTTAGTGAAGAATGCCTTTTTCTCTCAA - >AT4G19130.1
AAGGGAGCGTAAAGTTTCCACCTTTCACTCTAGGGGCTAATCTCAAATCCTTCATCTTCTTCAACCTCTGGTCTCTGTCAATTCAAACAAATCGTTTTTCGTCTCCTCAATTTTGAATTCATTTATAAAGATTTCACCCTTTTCCTCCTCGAATCTCGAATTGCTTCTACTGATTATCCAAATTTTCTTGAGGTTTGTAACGCTTTTGAATTTGGGTTTTAGTGTCAATCTGTAATGATGGAGGTAAGTTTGACGGCGGGAGCAATCGGGAAGATAATGAATGGAGAAGTGACGACTGAAGCAGATATGATTCCGGTGTTGCAAGTGACGGATTTGAAGCAGATTATGGCTCAACAAGATCCAACAAGAGAGAGGTTTAGGATGGTGTTATCTGATGGGACATACTTGCATCAAGGAATGCTAGGAACTGATCTCAACAATCTTGTCAAAGAAGGGACTCTTCAACCCGGTTCTATTGTTAGACTTACTCGTTTCGTCGGTGATGTCATCAAGGGTCGAAGGATTGTTATTGTTCCGCAACTGGAGGTGTTAAAACAGATTTCTGATATTATCGGGCATCCTGTTCCAGGAGGAAAGCATAATGATCAACGTGGAGCAGATTCTGGTATTAAGTTTAATACAACTGAGCAACAAGGTAGTGGTATCCGTCAAGTAAACAATATCGAGCCAGGGAGAAGTAATGCAGCTATTTCACCTCAGGTTGGTGGTACTGGTTCTAGTGTTCCTGCATCAACAACACCTTCCACTCGGGCATACAGCAATCCGTCTTCAGGTAATGGAGTCACTAGGCAGGACTATGCTCGTGATCCTCCAACAAGTTATCCTCATCAGCCTCAACCACCACCACCGATGTATGCAAACAGGGGACCAGTGGCTAGGAATGAAGCACCTCCTAAGATAATTCCAGTTAATGCTCTTAGTCCATATTCAGGTAGGTGGACCATCAAGGCCAGAGTCACGAATAAAGCAGCACTTAAGCAATACAGTAATCCCCGTGGGGAAGGGAAAGTGTTCAACTTTGATCTTCTTGATGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGATCAATTCTATGACCAGATTGTTGTTGGTAATCTTTATCTTATCTCGAGGGGAAGTTTGCGGCCTGCACAAAAGAACTTTAATCATCTTCGAAATGATTACGAGATCATGCTGGATAATGCATCAACTATAAAACAATGCTATGAAGAGGATGCTGCAATTCCGCGCCATCAGTTCCATTTCCGTACCATTGGGGATATTGAGAGCATGGAGAATAACTGCATCGTTGATGTAATTGGTATTGTGTCATCTATCAGTCCTACTGTAACAATAACGAGGAAAAACGGAACTGCAACACCGAAAAGATCACTTCAGTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACTATGTGGGGTGACTTCTGCAATGCAGAAGGACAAAGGCTGCAAAGTCTTTGTGATTCTGGTGTGTTTCCGGTTCTTGCTGTTAAGGCGGGCAGGATTAGTGAATTTAATGGAAAGACAGTGAGCACCATTGGATCAAGTCAGCTGTTCATTGACCCAGATTTTGTTGAAGCTGAGAAACTGAAGAACTGGTTTGAGAGAGAAGGAAAGAGTGTCCCTTGTATCTCCTTATCTCGGGAGTTTTCCGGCAGTGGCAAAGTAGATGTTCGTAAGACAATATCTCAAATTAAAGATGAGAAACTAGGAACCTCCGAAAAACCAGACTGGATCACAGTCAGTGCCACAATTTTATACTTGAAGTTTGATAACTTCTGCTACACAGCTTGTCCTATCATGAACGGTGATCGTCCATGCAGCAAAAAGGTAACAGACAATGGAGATGGGACATGGCGGTGCGAAAAGTGTGATAAAAGCGTTGATGAATGTGACTACAGGTATATACTGCAGCTTCAGATACAGGACCATACAGATCTTACTTGCGTCACAGCATTCCAGGAGGCTGGTGAAGAGATAATGGGCATATCTGCTAAAGATTTGTATTATGTGAAGAATGAACACAAGGATGAGGAAAAATTCGAAGATATCATCCGTAAGGTTGCTTTTACCAAGTACAACTTCAAGCTGAAGGTAAAAGAAGAAACATTCAGCGACGAACAGCGTGTGAAAGCAACAGTTGTGAAAGTGGACAAGCTAAACTATTCAGCAGATACCAGGACTATGTTAGGTGCTATGGATAAACTCAGGACCAGAGATGCAAATTCTCTTCCCATTAACCCAGAAGGATCCGATTACAATGCTGATGTGGTTAATACTGGTATAGGAAGCTCAGGAACCAGAGATCCCTCATCGGTCCAAAGAAGGGATTTCGGTTTACATGCGCATCAATCGGGTCAATCTGGGAATCACTATAGTGGTGGTGGTGCTACTACTAGCTGCAATGTCTGTGGAAACAGTGGTCATGTTTCTGCAAAGTGTCCAGGCGCTACTAAGCCGCAAGAGCAAGGGCAGTACATGGGTGGCTCTTACAGAGGCACGACGGGGAGTTATGGAGGAGGACTACCGAGACAACATGTTGGAAGCTACTGAGAGTCATAATCATCATCATCTGATGATGCTCTCACTCTTTTTTTTTGTAGACTTTTGTTTTGGTAGAATTAACTAATGCCAAACTTTTCTGAAGTCTTTTAAGGTTATTTAAGCATATTAGGTTCTCTTGTTTGGTTTCTTGAAAATATCAAACTCGTTTTGTGATATCTTTTTTTAAAAGTTTTTAGTGAAGAATGCCTTTTTCTCTCAA
CDS Sequence
Protein Sequence