Information report for AT4G19020
Gene Details
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Functional Descriptions
- GO:0010424 — involved in — DNA methylation on cytosine within a CG sequence
- GO:0003886 — enables — DNA (cytosine-5-)-methyltransferase activity
- GO:0034605 — acts upstream of or within — cellular response to heat
- GO:0005634 — located in — nucleus
- GO:0090116 — involved in — C-5 methylation of cytosine
- GO:0010426 — acts upstream of or within — DNA methylation on cytosine within a CHH sequence
- GO:0005634 — is active in — nucleus
- GO:0003677 — enables — DNA binding
- GO:0032183 — enables — SUMO binding
- GO:0003682 — enables — chromatin binding
Functional Keywords
Literature and News
- Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene. DOI: 10.1101/gad.905701 ; PMID: 11459824
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Genic and global functions for Paf1C in chromatin modification and gene expression in Arabidopsis. DOI: 10.1371/journal.pgen.1000077 ; PMID: 18725930
- Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome. DOI: 10.1016/j.cell.2012.10.054 ; PMID: 23313553
- The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. DOI: 10.1016/j.cell.2013.02.033 ; PMID: 23540698
- Identification of Arabidopsis SUMO-interacting proteins that regulate chromatin activity and developmental transitions. DOI: 10.1073/pnas.1319985110 ; PMID: 24255109
- Plant DNA Methyltransferase Genes: Multiplicity, Expression, Methylation Patterns. DOI: 10.1134/S0006297916020085 ; PMID: 27260394
- Arabidopsis male sexual lineage exhibits more robust maintenance of CG methylation than somatic tissues. DOI: 10.1073/pnas.1619074114 ; PMID: 27956643
- Large-scale comparative epigenomics reveals hierarchical regulation of non-CG methylation in Arabidopsis. DOI: 10.1073/pnas.1716300115 ; PMID: 29339507
- The RNA Export Factor ALY1 Enables Genome-Wide RNA-Directed DNA Methylation. DOI: 10.1105/tpc.18.00624 ; PMID: 30814259
- Rare earth elements regulate the endocytosis and DNA methylation in root cells of Arabidopsis thaliana. DOI: 10.1016/j.chemosphere.2019.04.076 ; PMID: 31004819
- DNA methylation repels targeting of Arabidopsis REF6. DOI: 10.1038/s41467-019-10026-1 ; PMID: 31048693
- Common alleles of CMT2 and NRPE1 are major determinants of CHH methylation variation in Arabidopsis thaliana. DOI: 10.1371/journal.pgen.1008492 ; PMID: 31887137
- The DNA methylation landscape of the root-knot nematode-induced pseudo-organ, the gall, in Arabidopsis, is dynamic, contrasting over time, and critically important for successful parasitism. DOI: 10.1111/nph.18395 ; PMID: 35872574
- Establishment and maintenance of DNA methylation in nematode feeding sites. DOI: 10.3389/fpls.2022.1111623 ; PMID: 36704169
- The plant response to high CO(2) levels is heritable and orchestrated by DNA methylation. DOI: 10.1111/nph.18876 ; PMID: 36918471
Gene Resources
- UniProt: A0A1P8B8N3
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B8N3
- EnsemblPlants: AT4G19020.2
- Gramene: AT4G19020.2
- Orthologous matrix: NCRETIK
- ExpressionAtlas: AT4G19020
- InterPro: IPR000953, IPR001025, IPR001525
- PANTHER: PTHR10629, PTHR10629:SF34
- SUPFAM: SSF53335, SSF54160
- PROSITE: PS50013, PS51038, PS51679
- Gene3D: 2.30.30.490, 3.40.50.150, 3.90.120.10
- SWISS-MODEL: A0A1P8B8N3
- Conserved Domain Database: cd04716, cd18635
Sequences
cDNA Sequence
- >AT4G19020.2
CTTTTTCAGTTTTGTTTCCCTATTGGCTACTTTGGATCCCTTTTAGATTCTTTATATTCTCTGATGTTATCGCCGGCCAAATGTGAGTCAGAAGAGGCTCAAGCTCCATTGGATCTCCATTCTTCTTCTAGATCTGAACCGGAATGTCTCTCTCTTGTCCTCTGGTGTCCCAATCCTGAAGAAGCTGCTCCGTCCTCTACTAGAGAACTCATAAAGCTCCCCGACAACGGAGAGATGAGTTTGAGGAGATCCACGACGCTTAATTGTAATTCGCCTGAAGAGAACGGAGGAGAAGGGAGAGTTTCGCAGAGGAAGTCATCTCGTGGTAAGTCACAGCCGCTGCTTATGTTGACGAACGGTTGTCAGCTTCGGAGGTCGCCGAGATTTAGGGCGGTGGATGGAAATTTTGACAGTGTATGCTCGGTTCCGGTGACTGGAAAGTTTGGGTCGAGGAAGAGAAAGAGTAATAGTGCTCTCGATAAGAAGGAAAGCTCAGATTCTGAGGGACTGACATTCAAAGATATAGCTGTAATTGCCAAGAGCCTGGAGATGGAAATAATTTCCGAGTGCCAATATAAGAACAACGTTGCTGAAGGTAGATCAAGATTGCAAGATCCAGCCAAGAGGAAAGTTGATAGTGATACATTATTATATTCAAGCATCAATAGTTCTAAACAGAGTCTCGGAAGCAATAAACGAATGAGGAGATCTCAAAGATTCATGAAGGGAACGGAGAATGAGGGAGAAGAAAATCTAGGCAAGTCTAAAGGAAAAGGGATGTCTCTGGCATCTTGCTCATTTCGAAGATCTACAAGGCTATCTGGAACTGTGGAAACTGGCAACACAGAAACTTTGAACAGAAGAAAAGATTGTGGCCCGGCATTATGTGGTGCAGAACAGGTGAGGGGAACTGAGAGGCTGGTGCAAATTAGTAAGAAGGATCACTGTTGTGAGGCTATGAAGAAATGTGAAGGTGATGGCCTAGTTTCATCCAAGCAAGAGCTATTAGTTTTTCCTTCGGGTTGCATCAAGAAAACTGTAAATGGTTGTAGGGACAGAACGTTAGGAAAACCCAGATCTTCTGGCCTAAATACGGATGATATTCACACTAGCTCTTTGAAAATTAGCAAAAATGATACTAGTAATGGATTAACTATGACGACTGCGTTAGTGGAGCAAGATGCAATGGAGTCTTTACTTCAGGGTAAAACTAGTGCTTGTGGTGCTGCTGATAAGGGAAAAACTCGGGAAATGCATGTAAATTCTACTGTGATCTATCTCTCTGACAGCGATGAACCGTCTTCTATTGAATATTTAAATGGAGATAATTTGACACAAGTCGAAAGTGGATCTGCCCTCTCCTCTGGGGGTAATGAGGGAATCGTTTCACTGGATCTGAATAATCCAACGAAATCAACCAAGAGAAAGGGTAAACGGGTAACCCGGACTGCTGTCCAAGAGCAGAACAAACGTAGTATCTGTTTTTTCATTGGAGAGCCACTTTCTTGCGAGGAGGCTCAAGAAAGATGGCGCTGGAGATATGAACTTAAGGAACGCAAATCTAAGAGTAGAGGCCAACAATCAGAGGATGACGAAGACAAGATTGTTGCAAATGTAGAATGCCATTATTCGCAAGCAAAAGTCGACGGTCACACCTTTAGCCTTGGAGACTTTGCCTACATAAAGGGTGAAGAAGAAGAAACCCATGTTGGCCAGATAGTAGAGTTTTTTAAGACAACAGATGGAGAAAGCTACTTCCGAGTTCAGTGGTTTTACAGAGCAACGGATACAATAATGGAACGGCAGGCTACTAATCATGACAAAAGGCGTCTCTTCTATTCTACCGTAATGAATGACAATCCAGTAGATTGTCTTATTTCTAAAGTTACTGTTTTACAAGTTTCACCTAGGGTCGGATTGAAGCCCAATTCTATAAAATCTGACTACTATTTTGATATGGAGTATTGTGTGGAGTATTCAACATTTCAAACCTTGAGAAATCCTAAAACGTCCGAAAACAAGCTTGAGTGTTGTGCCGATGTGGTACCTACAGAATCCACTGAATCTATTTTGAAAAAGAAAAGTTTTAGCGGAGAGCTTCCTGTGCTTGATCTTTACAGTGGTTGTGGTGGAATGTCAACTGGGTTAAGTCTTGGAGCCAAAATATCTGGTGTTGATGTCGTGACGAAATGGGCTGTGGACCAGAATACGGCTGCCTGTAAGAGCTTGAAATTGAACCATCCAAACACGCAGGTTAGGAATGATGCTGCTGGAGACTTCCTCCAACTTTTGAAGGAATGGGATAAATTATGCAAGCGATATGTGTTTAATAATGATCAGAGAACTGATACATTAAGATCCGTAAATTCAACTAAAGAAACTAGTGGAAGCAGCTCTTCTAGTGATGATGATTCAGATTCTGAGGAGTACGAAGTGGAAAAGCTAGTTGATATATGCTTTGGTGATCATGACAAGACAGGAAAAAATGGCCTGAAGTTTAAGGTGCACTGGAAAGGATACAGAAGCGACGAAGATACATGGGAACTAGCAGAGGAATTGAGTAACTGTCAAGATGCCATTCGGGAGTTTGTAACTAGTGGATTTAAGTCCAAGATCTTGCCACTTCCTGGTCGTGTTGGTGTGATATGTGGGGGACCTCCATGCCAAGGAATTAGTGGCTATAACCGGCACAGGAATGTTGATTCTCCATTGAATGATGAAAGGAATCAGCAAATTATAGTTTTTATGGACATAGTGGAGTATCTGAAACCCTCATATGTGTTGATGGAAAATGTTGTTGATATTCTGCGTATGGACAAAGGTTCTCTTGGGCGATACGCTTTGAGCCGTCTTGTGAACATGAGATACCAAGCAAGGTTAGGTATCATGACAGCTGGTTGCTATGGTCTTTCCCAATTTCGATCCAGAGTTTTCATGTGGGGAGCTGTTCCAAACAAGAACCTACCTCCGTTTCCGCTTCCAACGCATGATGTTATTGTCAGATATGGGCTTCCACTTGAGTTCGAGAGGAATGTAGTTGCTTATGCTGAAGGCCAACCCAGAAAACTTGAAAAAGCTCTTGTTCTAAAAGATGCGATATCAGATCTTCCTCATGTATCAAACGATGAAGACCGGGAGAAATTGCCTTATGAAAGTCTCCCAAAAACAGATTTTCAGAGGTACATTAGATCAACCAAACGTGATTTGACAGGCTCTGCAATTGATAACTGTAACAAAAGAACAATGCTACTGCATGATCACAGGCCGTTCCATATAAATGAAGACGACTATGCCCGAGTTTGCCAAATCCCCAAGAGGAAGGGAGCTAATTTCAGGGATCTTCCGGGGTTAATCGTCAGAAACAATACAGTATGTCGTGATCCATCAATGGAACCGGTTATTCTGCCATCAGGAAAGCCTTTGGTACCAGGATACGTCTTTACTTTTCAGCAAGGGAAATCTAAAAGACCGTTTGCTCGTCTTTGGTGGGATGAAACTGTTCCAACCGTTCTAACAGTCCCAACATGCCACAGTCAGGCGTTATTGCATCCTGAGCAAGATCGAGTGCTAACCATAAGAGAATCTGCACGGCTTCAAGGTTTCCCTGATTACTTCCAGTTCTGTGGAACCATTAAAGAAAGGTATTGTCAGATTGGAAATGCAGTGGCAGTCTCGGTTTCTCGTGCTTTAGGTTATTCGCTTGGTATGGCTTTTCGTGGTCTAGCCCGCGACGAGCATCTTATAAAACTTCCCCAAAACTTTTCGCATTCAACTTACCCTCAGCTTCAAGAAACCATTCCTCATTGAAGCAGAGGACATTAAACAAGTTTGTTATTAGTTCCTCTCCATGAGGCTTCGTCAAAATGATCAATTTTGTTCTTTAGTTTTTCCTTGTGTTAGTGAATTGTGACATCATAGCGGCTGGCCAGCTCAGTCTACTATGCTCGATCGAAATTTCGGTTTGATTAGGATTTTTCGATTAGTAAATTCTTCAAAAATTAATCTTATTTTAGCCAACTAATATGTAATTTATTCTTTGTTGGGTAATTAGATGAATAATAATTGGTCTTCTTTCTCACATTTTAGTGGATGAAAAGTTTCCTCATTGTTTTCTTCTTTATTCATCACAAATGAAA - >AT4G19020.1
CTTTTTCAGTTTTGTTTCCCTATTGGCTACTTTGGATCCCTTTTAGATTCTTTATATTCTCTGATGTTATCGCCGGCCAAATGTGAGTCAGAAGAGGCTCAAGCTCCATTGGATCTCCATTCTTCTTCTAGATCTGAACCGGAATGTCTCTCTCTTGTCCTCTGGTGTCCCAATCCTGAAGAAGCTGCTCCGTCCTCTACTAGAGAACTCATAAAGCTCCCCGACAACGGAGAGATGAGTTTGAGGAGATCCACGACGCTTAATTGTAATTCGCCTGAAGAGAACGGAGGAGAAGGGAGAGTTTCGCAGAGGAAGTCATCTCGTGGTAAGTCACAGCCGCTGCTTATGTTGACGAACGGTTGTCAGCTTCGGAGGTCGCCGAGATTTAGGGCGGTGGATGGAAATTTTGACAGTGTATGCTCGGTTCCGGTGACTGGAAAGTTTGGGTCGAGGAAGAGAAAGAGTAATAGTGCTCTCGATAAGAAGGAAAGCTCAGATTCTGAGGGACTGACATTCAAAGATATAGCTGTAATTGCCAAGAGCCTGGAGATGGAAATAATTTCCGAGTGCCAATATAAGAACAACGTTGCTGAAGGTAGATCAAGATTGCAAGATCCAGCCAAGAGGAAAGTTGATAGTGATACATTATTATATTCAAGCATCAATAGTTCTAAACAGAGTCTCGGAAGCAATAAACGAATGAGGAGATCTCAAAGATTCATGAAGGGAACGGAGAATGAGGGAGAAGAAAATCTAGGCAAGTCTAAAGGAAAAGGGATGTCTCTGGCATCTTGCTCATTTCGAAGATCTACAAGGCTATCTGGAACTGTGGAAACTGGCAACACAGAAACTTTGAACAGAAGAAAAGATTGTGGCCCGGCATTATGTGGTGCAGAACAGGTGAGGGGAACTGAGAGGCTGGTGCAAATTAGTAAGAAGGATCACTGTTGTGAGGCTATGAAGAAATGTGAAGGTGATGGCCTAGTTTCATCCAAGCAAGAGCTATTAGTTTTTCCTTCGGGTTGCATCAAGAAAACTGTAAATGGTTGTAGGGACAGAACGTTAGGAAAACCCAGATCTTCTGGCCTAAATACGGATGATATTCACACTAGCTCTTTGAAAATTAGCAAAAATGATACTAGTAATGGATTAACTATGACGACTGCGTTAGTGGAGCAAGATGCAATGGAGTCTTTACTTCAGGGTAAAACTAGTGCTTGTGGTGCTGCTGATAAGGGAAAAACTCGGGAAATGCATGTAAATTCTACTGTGATCTATCTCTCTGACAGCGATGAACCGTCTTCTATTGAATATTTAAATGGAGATAATTTGACACAAGTCGAAAGTGGATCTGCCCTCTCCTCTGGGGGTAATGAGGGAATCGTTTCACTGGATCTGAATAATCCAACGAAATCAACCAAGAGAAAGGGTAAACGGGTAACCCGGACTGCTGTCCAAGAGCAGAACAAACGTAGTATCTGTTTTTTCATTGGAGAGCCACTTTCTTGCGAGGAGGCTCAAGAAAGATGGCGCTGGAGATATGAACTTAAGGAACGCAAATCTAAGAGTAGAGGCCAACAATCAGAGGATGACGAAGACAAGATTGTTGCAAATGTAGAATGCCATTATTCGCAAGCAAAAGTCGACGGTCACACCTTTAGCCTTGGAGACTTTGCCTACATAAAGGGTGAAGAAGAAGAAACCCATGTTGGCCAGATAGTAGAGTTTTTTAAGACAACAGATGGAGAAAGCTACTTCCGAGTTCAGTGGTTTTACAGAGCAACGGATACAATAATGGAACGGCAGGCTACTAATCATGACAAAAGGCGTCTCTTCTATTCTACCGTAATGAATGACAATCCAGTAGATTGTCTTATTTCTAAAGTTACTGTTTTACAAGTTTCACCTAGGGTCGGATTGAAGCCCAATTCTATAAAATCTGACTACTATTTTGATATGGAGTATTGTGTGGAGTATTCAACATTTCAAACCTTGAGAAATCCTAAAACGTCCGAAAACAAGCTTGAGTGTTGTGCCGATGTGGTACCTACAGAATCCACTGAATCTATTTTGAAAAAGAAAAGTTTTAGCGGAGAGCTTCCTGTGCTTGATCTTTACAGTGGTTGTGGTGGAATGTCAACTGGGTTAAGTCTTGGAGCCAAAATATCTGGTGTTGATGTCGTGACGAAATGGGCTGTGGACCAGAATACGGCTGCCTGTAAGAGCTTGAAATTGAACCATCCAAACACGCAGGTTAGGAATGATGCTGCTGGAGACTTCCTCCAACTTTTGAAGGAATGGGATAAATTATGCAAGCGATATGTGTTTAATAATGATCAGAGAACTGATACATTAAGATCCGTAAATTCAACTAAAGAAACTAGTGGAAGCAGCTCTTCTAGTGATGATGATTCAGATTCTGAGGAGTACGAAGTGGAAAAGCTAGTTGATATATGCTTTGGTGATCATGACAAGACAGGAAAAAATGGCCTGAAGTTTAAGGTGCACTGGAAAGGATACAGAAGCGACGAAGATACATGGGAACTAGCAGAGGAATTGAGTAACTGTCAAGATGCCATTCGGGAGTTTGTAACTAGTGGATTTAAGTCCAAGATCTTGCCACTTCCTGGTCGTGTTGGTGTGATATGTGGGGGACCTCCATGCCAAGGAATTAGTGGCTATAACCGGCACAGGAATGTTGATTCTCCATTGAATGATGAAAGGAATCAGCAAATTATAGTTTTTATGGACATAGTGGAGTATCTGAAACCCTCATATGTGTTGATGGAAAATGTTGTTGATATTCTGCGTATGGACAAAGGTTCTCTTGGGCGATACGCTTTGAGCCGTCTTGTGAACATGAGATACCAAGCAAGGTTAGGTATCATGACAGCTGGTTGCTATGGTCTTTCCCAATTTCGATCCAGAGTTTTCATGTGGGGAGCTGTTCCAAACAAGAACCTACCTCCGTTTCCGCTTCCAACGCATGATGTTATTGTCAGATATGGGCTTCCACTTGAGTTCGAGAGGAATGTAGTTGCTTATGCTGAAGGCCAACCCAGAAAACTTGAAAAAGCTCTTGTTCTAAAAGATGCGATATCAGATCTTCCTCATGTATCAAACGATGAAGACCGGGAGAAATTGCCTTATGAAAGTCTCCCAAAAACAGATTTTCAGAGGTACATTAGATCAACCAAACGTGATTTGACAGGCTCTGCAATTGATAACTGTAACAAAAGAACAATGCTACTGCATGATCACAGGCCGTTCCATATAAATGAAGACGACTATGCCCGAGTTTGCCAAATCCCCAAGAGGAAGGGAGCTAATTTCAGGGATCTTCCGGGGTTAATCGTCAGAAACAATACAGTATGTCGTGATCCATCAATGGAACCGGTTATTCTGCCATCAGGAAAGCCTTTGGTACCAGGATACGTCTTTACTTTTCAGCAAGGGAAATCTAAAAGACCGTTTGCTCGTCTTTGGTGGGATGAAACTGTTCCAACCGTTCTAACAGTCCCAACATGCCACAGTCAGGCGTTATTGCATCCTGAGCAAGATCGAGTGCTAACCATAAGAGAATCTGCACGGCTTCAAGGTTTCCCTGATTACTTCCAGTTCTGTGGAACCATTAAAGAAAGGTATTGTCAGATTGGAAATGCAGTGGCAGTCTCGGTTTCTCGTGCTTTAGGTTATTCGCTTGGTATGGCTTTTCGTGGTCTAGCCCGCGACGAGCATCTTATAAAACTTCCCCAAAACTTTTCGCATTCAACTTACCCTCAGCTTCAAGAAACCATTCCTCATTGAAGCAGAGGACATTAAACAAGTTTGTTATTAGTTCCTCTCCATGAGGCTTCGTCAAAATGATCAATTTTGTTCTTTAGTTTTTCCTTGTGTTAGTGAATTGTGACATCATAGCGGCTGGCCAGCTCAGTCTACTATGCTCGATCGAAATTTCGGTTTGATTAGGATTTTTCGATTAGTAAATTCTTCAAAAATTAATCTTATTTTAGCCAACTAATATGTAATTTATTCTTTGTTGGGTAATTAGATGAATAATAATTGGTCTTCTTTCTCACATTTTAGTGGATGAAAAGTTTCCTCATTGTTTTCTTCTTTATTCATCACAAATGAAA
CDS Sequence
Protein Sequence