Information report for AT4G18990
Gene Details
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Functional Descriptions
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0001666 — acts upstream of or within — response to hypoxia
- GO:0044042 — involved in — glucan metabolic process
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0030247 — enables — polysaccharide binding
- GO:0010411 — involved in — xyloglucan metabolic process
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0016762 — enables — xyloglucan:xyloglucosyl transferase activity
- GO:0005576 — located in — extracellular region
- GO:0042546 — involved in — cell wall biogenesis
- GO:0004553 — enables — hydrolase activity, hydrolyzing O-glycosyl compounds
Functional Keywords
Literature and News
- A comprehensive expression analysis of all members of a gene family encoding cell-wall enzymes allowed us to predict cis-regulatory regions involved in cell-wall construction in specific organs of Arabidopsis. DOI: 10.1093/pcp/pce154 ; PMID: 11673616
- The XTH family of enzymes involved in xyloglucan endotransglucosylation and endohydrolysis: current perspectives and a new unifying nomenclature. DOI: 10.1093/pcp/pcf171 ; PMID: 12514239
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Dissecting salt stress pathways. DOI: 10.1093/jxb/erj098 ; PMID: 16510518
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Light quality-mediated petiole elongation in Arabidopsis during shade avoidance involves cell wall modification by xyloglucan endotransglucosylase/hydrolases. DOI: 10.1104/pp.110.162057 ; PMID: 20688978
- Ride to cell wall: Arabidopsis XTH11, XTH29 and XTH33 exhibit different secretion pathways and responses to heat and drought stress. DOI: 10.1111/tpj.15301 ; PMID: 33932060
Gene Resources
- UniProt: A0A178V5N3
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178V5N3
- EnsemblPlants: AT4G18990.1
- Gramene: AT4G18990.1
- KEGG: ath:AT4G18990
- Orthologous matrix: FTNASAC
- ExpressionAtlas: AT4G18990
- InterPro: IPR000757, IPR010713, IPR013320
- PANTHER: PTHR31062
- SUPFAM: SSF49899
- PROSITE: PS51257, PS51762
- Gene3D: 2.60.120.200
- SWISS-MODEL: A0A178V5N3
Sequences
cDNA Sequence
- >AT4G18990.1
ATGGTCATCTTTCCCACTTTGACGCATCGTAAGAAAACATAAACAACAACAAAGATCTTAGACCATACAAAGAAAGAGAAAGTTAACCAATTTTCTCTTCTTCTTTTTTTTTTCTGGATTTGAAACAAAAAATAGAACAAAAGATATGAGAGATTCAATCTATCTTTTATGGATTGATAATCGATTAGTGGTAATAATTATGATGGTGATGATGGTATCATGTAGATGCGTTTTGGGATTGGAGAACATAAATCCGATATTCTTCGATGAAGGTCTTTCTCATTTGTTTGGTGAAGGTAATCTCATCCGATCTCCTGATGATCGTAGCGTTCGATTACTCCTCGACAAATACACTGGGTCCGGATTTATCTCTTCAAGCATGTATCAACATGGGTTTTTCAGTTCGTTGATAAAGTTGCCAGGAGCGTACACGGCTGGTATCGTCGTCGCTTTCTATACATCAAATGGTGATGTGTTTGTGAAGGACCATGACGAACTAGACATAGAGTTTTTAGGGAACCTAGAAGGAAAGCCTTGGCGATTTCAAACGAATATGTATGGAAACGGTAGCACAAACCGCGGCCGCGAAGAACGCTACCGTCTTTGGTTTGATCCTTCCAAGGAGTTTCACCGTTATAGCATCCTTTGGACCCCTACCAAAATAATATTTTGGGTAGATGATGTACCAATAAGAGAAATCCTAAGAAAAGAGGAAATGAATGGAGACTATCCACAAAAGCCAATGTCTCTCTATGCAACCATTTGGGACGCCTCAAGTTGGGCTACTTCCGGTGGAAAATTCGGCGTCGACTACACATTTTCACCTTTTGTTTCCGAATTCAAAGATATAGCCCTCGACGGTTGTAATGTCTCTGACTCATTCCCCGGAGAAAACAACAACAACAACATCGGTAATTACAATAACATAAATTGTTCTGTCTCCGACCAATTTCTCATGAGCAATGACTACTCAACCATTAGTCCTAAACAAGCAACTGCTATGCGACGGTTCCGAGAACGTTATATGTATTATTCGTATTGTTATGACACCATTCGATACTCGGTGCCTCCACCGGAGTGTGTTATTGTGACGGCTGAGAAGAACCGGTTTAGAGATACTGGACGGTTAAAGTTTGGTGGTAGTCATCCTAAAGTGCATAAAGCACGTAAGAAACGGCGACGGAATCGGTCTACGCCGGTTGTATCGGCTGACCTATAGCATTAAGTTAGTTGAATTTATTACCGAGTATGTATAAATAGTGTTTTTTTTTTTAATTATATAGGTTTTCTTGTAGATTTTATAATTGTTTGATTTTTTCTTGTTTTAAATTTCATGTCTTATTTATACATTTTTACCCTTCTATTGACATGATGCGATACTTC - >AT4G18990.2
ATGGTCATCTTTCCCACTTTGACGCATCGTAAGAAAACATAAACAACAACAAAGATCTTAGACCATACAAAGAAAGAGAAAGTTAACCAATTTTCTCTTCTTCTTTTTTTTTTCTGGATTTGAAACAAAAAATAGAACAAAAGATATGAGAGATTCAATCTATCTTTTATGGATTGATAATCGATTAGTGGTAATAATTATGATGGTGATGATGGTATCATGTAGATGCGTTTTGGGATTGGAGAACATAAATCCGATATTCTTCGATGAAGGTCTTTCTCATTTGTTTGGTGAAGGTAATCTCATCCGATCTCCTGATGATCGTAGCGTTCGATTACTCCTCGACAAATACACTGGGTCCGGATTTATCTCTTCAAGCATGTATCAACATGGGTTTTTCAGTTCGTTGATAAAGTTGCCAGGAGCGTACACGGCTGGTATCGTCGTCGCTTTCTATACATCAAATGGTGATGTGTTTGTGAAGGACCATGACGAACTAGACATAGAGTTTTTAGGGAACCTAGAAGGAAAGCCTTGGCGATTTCAAACGAATATGTATGGAAACGGTAGCACAAACCGCGGCCGCGAAGAACGCTACCGTCTTTGGTTTGATCCTTCCAAGGAGTTTCACCGTTATAGCATCCTTTGGACCCCTACCAAAATAATATTTTGGGTAGATGATGTACCAATAAGAGAAATCCTAAGAAAAGAGGAAATGAATGGAGACTATCCACAAAAGCCAATGTCTCTCTATGCAACCATTTGGGACGCCTCAAGTTGGGCTACTTCCGGTGGAAAATTCGGCGTCGACTACACATTTTCACCTTTTGTTTCCGAATTCAAAGATATAGCCCTCGACGGTTGTAATGTCTCTGACTCATTCCCCGGAGAAAACAACAACAACAACATCGGTAATTACAATAACATAAATTGTTCTGTCTCCGACCAATTTCTCATGAGCAATGACTACTCAACCATTAGTCCTAAACAAGCAACTGCTATGCGACGGTTCCGAGAACGTTATATGTATTATTCGTATTGTTATGACACCATTCGATACTCGGTGCCTCCACCGGAGTGTGTTATTGTGACGGCTGAGAAGAACCGGTTTAGAGATACTGGACGGTTAAAGTTTGGTGGTAGTCATCCTAAAGTGCATAAAGCACGTAAGAAACGGCGACGGAATCGGTCTACGCCGGTTGTATCGGCTGACCTATAGCATTAAGTTAGTTGAATTTATTACCGAGTATGTATAAATAGTGTTTTTTTTTTTAATTATATAGGTTTTCTTGTAGATTTTATAATTGTTTGATTTTTTCTTGTTTTAAATTTCATGTCTTATTTATACATTTTTACCCTTCTATTGACATGATGCGATACTTC
CDS Sequence
Protein Sequence