Information report for AT4G18880
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0000302 — acts upstream of or within — response to reactive oxygen species
- GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0034605 — involved in — cellular response to heat
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0042803 — enables — protein homodimerization activity
- GO:0005634 — is active in — nucleus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis. DOI: 10.1038/sj.emboj.7600337 ; PMID: 15282545
- The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis. DOI: 10.1104/pp.105.068254 ; PMID: 16183833
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. DOI: 10.1186/gb-2007-8-4-r49 ; PMID: 17408486
- Transcriptional responses of Arabidopsis thaliana ecotypes with different glucosinolate profiles after attack by polyphagous Myzus persicae and oligophagous Brevicoryne brassicae. DOI: 10.1093/jxb/erm043 ; PMID: 17545220
- Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. DOI: 10.1186/1471-2164-8-304 ; PMID: 17764576
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme. DOI: 10.1186/1471-2164-9-S2-S6 ; PMID: 18831797
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- The heat shock factor A4A confers salt tolerance and is regulated by oxidative stress and the mitogen-activated protein kinases MPK3 and MPK6. DOI: 10.1104/pp.114.237891 ; PMID: 24676858
- The roles of Arabidopsis HSFA2, HSFA4a, and HSFA7a in the heat shock response and cytosolic protein response. DOI: 10.1186/s40529-018-0231-0 ; PMID: 29785454
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178UUP9
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178UUP9
- EnsemblPlants: AT4G18880.1
- Gramene: AT4G18880.1
- KEGG: ath:AT4G18880
- Orthologous matrix: SPRIIDM
- ExpressionAtlas: AT4G18880
- InterPro: IPR000232, IPR036388, IPR036390
- PANTHER: PTHR10015, PTHR10015:SF161
- SUPFAM: SSF46785, SSF58113
- Gene3D: 1.10.10.10
- SWISS-MODEL: A0A178UUP9
Sequences
cDNA Sequence
- >AT4G18880.1
TCCACCAAACCCAATCTTTGTAAAACTATGAAACAGCTGTTCTGTTCTGATTCGTACTTGCTTCATCAACCTTTTTGTAATCAAAAGCTAAATCGTATAATCACAAATCCCTCAGAAACTGTTCGTTTTTTGTTATCGTTTACGCGTTTTTAATCGCTAATCAGTTATATAAAAAATCGACGAAAGGTTTGACGAATCGTCGTCGTCGTAAATCCCCACCGGGTCAATCGACTCGTTTACTTTTCTACGGTCTTCTCTCCTCAAAGAGTCTCTCTCTCTCTCTCTGATATTTCCGCAGCAATAATGGTATAGATAGAGATACAGAAGCAGACAAATTATTGCTGCTTGAAATTCTCTTGTCTGATTAAAATATATATACCCAAGTCCAGAAGCTGTTTAGGTTCGAGAAGCAGAGAGGGTTCGAGAAGCTAATAAGGGTTTCTTCTTTTTGATTTTAATGCTAAAAGGGTTCTAGATTCGTTGAATTTTACAAGGGTTTTAGGGGTTCTTAGAAGCTTTTGCTTGATTGTCTTTTATTTAGAAACAGTGGTGAGTTTTTAGTCTTTCACTTTGTTCAAGTTCGAAGCTTTTTTTGGAGGGAATTTTGGGCTTCTGATTTTGATCGAAACTTACTGATAGTAAGTTCTTTGAGTCCTCCTTAACTGTAGTTTCTGTGTACTGAAGTTATTGAATTGAAAGTTTTTATCTTTTTTGGTTATTGAAACTTTCATAGTTTGATCAAAAGAGTCTCTTGCTCTGTTTTTGGCTCTGTTTTTGTGAGTGTGATTGTAAGCTTTGTTGTGAGTAGATTGAATCAAGGAGTGTGAGAGTTGTTAAAAGTGTTTTCAGAGATGGATGAGAATAATCATGGAGTTTCATCAAGCTCACTTCCACCTTTCCTCACCAAAACATATGAGATGGTTGATGATTCTTCATCCGATTCTATCGTCTCTTGGAGTCAGAGCAATAAGAGTTTCATCGTTTGGAATCCGCCGGAGTTTTCTAGAGATCTTCTTCCGAGATTCTTCAAGCACAATAACTTCTCTAGCTTTATCCGCCAGCTTAACACATATGGTTTTAGAAAAGCTGATCCTGAGCAATGGGAATTTGCGAATGATGATTTTGTGAGAGGTCAACCTCATCTTATGAAGAACATTCATAGACGCAAACCAGTTCATAGCCACTCTTTACCGAATCTTCAAGCTCAGTTAAACCCGTTGACGGATTCAGAACGAGTGAGAATGAATAATCAGATTGAGAGATTGACAAAAGAGAAAGAAGGATTGCTTGAAGAGTTACATAAACAAGACGAGGAACGAGAAGTGTTTGAGATGCAAGTGAAAGAACTTAAAGAACGATTACAACACATGGAGAAGCGTCAGAAAACAATGGTTTCGTTTGTTTCTCAAGTATTGGAAAAGCCAGGGCTTGCTTTGAACCTATCGCCGTGTGTTCCCGAAACAAACGAGAGGAAAAGAAGGTTCCCTAGGATCGAGTTCTTTCCCGATGAACCGATGTTGGAAGAGAACAAAACTTGTGTTGTTGTGAGAGAGGAAGGTTCTACAAGCCCTTCTTCACACACAAGAGAGCATCAAGTGGAACAGTTAGAGTCATCGATAGCGATTTGGGAGAATCTTGTATCGGATTCTTGTGAGAGTATGTTACAATCAAGAAGTATGATGACACTTGATGTGGATGAATCATCTACTTTTCCAGAGAGCCCTCCTCTTTCTTGCATACAGTTAAGTGTCGATTCACGTCTCAAATCTCCTCCTTCTCCAAGGATCATCGATATGAACTGTGAGCCCGATGGTTCGAAAGAACAGAACACTGTTGCTGCTCCTCCTCCTCCTCCAGTAGCAGGAGCGAATGATGGCTTCTGGCAGCAGTTTTTCTCAGAGAATCCTGGCTCAACCGAGCAACGGGAAGTTCAATTAGAGAGGAAAGACGATAAAGATAAAGCCGGAGTACGTACTGAGAAATGTTGGTGGAATTCGAGAAATGTTAATGCAATTACAGAACAGCTTGGACATCTGACTTCTTCAGAGAGAAGTTGATATGTCAAAGATTAAATTTCTAGTCTGTTTTAGTTACTTGTAAAATAGGGTTTCTCAGTTTTATTGTTTTCGATTACAGTACTTAGGTATGGTTCAGCTGTTTATTTATCACTTGTATGATCTTTCACAGTTCATTGTAGCAGACTTCAATGGTAATGATAAGCTAGAGCTTATGGATAGTATTCATAAAATGAGATTGACCTTCAACAAAATCATAATTTCCAAAGTCCTATATGATGTTGTAGACTTTTATCAGTATACCATTCAATAATTTATGAAGAACACGTCGG
CDS Sequence
Protein Sequence