Gene Details:
- Gene ID: AT4G18730
- Gene Symbol: RPL16B, uL5x
- Gene Name: ribosomal protein L16B, Ribosomal Protein uL5x
- Description: ribosomal protein L16B;(source:Araport11)
- TAIR Accession: locus:2124112
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0003729 — enables — mRNA binding
- GO:0005737 — located in — cytoplasm
- GO:0005829 — located in — cytosol
- GO:0006412 — acts upstream of or within — translation
- GO:0005773 — located in — vacuole
- GO:0022625 — located in — cytosolic large ribosomal subunit
Literature:
- Developmental regulation of ribosomal protein L16 genes in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1995.08010065.x ; PMID: 7655508
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by argonaute, dicer, and RNA-dependent RNA polymerase in Arabidopsis. DOI: 10.1105/tpc.106.042127 ; PMID: 16798886
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Overexpressing Ribosomal Protein L16D Affects Leaf Development but Confers Pathogen Resistance in Arabidopsis. DOI: 10.3390/ijms24119479 ; PMID: 37298429
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Sequences:
cDNA Sequence
- >AT4G18730.1
ACACTACGCAGCCGACGCAATTCGTGTGCCACTCTATTTGCTCATCTCCTTCGATTTCGAACCCCTAATCTTGAGATGGCATCGGAGAAGAAGCTCTCGAACCCTATGAGGGATATTAAGGTCCAGAAGCTAGTTCTTAACATCTCTGTTGGTGAGAGTGGTGATCGTCTCACTCGTGCCTCCAAGGTGTTGGAACAGCTCAGTGGTCAGACTCCTGTCTTCTCTAAGGCGAGGTACACTGTGAGGTCTTTCGGTATCAGGCGTAATGAAAAGATTGCGTGCTATGTCACCGTGAGAGGTGAGAAGGCAATGCAGCTTCTTGAGAGTGGCTTGAAAGTGAAGGAATACGAGCTGTTGAGGAGGAACTTCAGTGACACTGGCTGCTTCGGATTCGGTATCCAGGAGCACATTGATCTTGGAATCAAGTATGATCCTTCTACCGGTATCTACGGTATGGATTTCTACGTTGTTCTTGAACGTCCAGGATACCGTGTGGCCCGTCGCCGTAGATGCAAGACTCGCGTTGGTATTCAACATAGAGTTACCAAGGATGATGCCATGAAGTGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCTCAGAACATCACTGGTTGAAGAGCTTTTTTTTGTCATTTTGTTTTGTTTCAAGTTCTTATATTTAAGATTCTGGATAGTAAGGATTTCGTGTTGTGGTAACCTTTTTGACTTAAGTTGGTTAAGAATCTTCAAGTACCTTCTAAATATGAAACCATTTTTGGGGGTTTTTGTTTACCAATTCTAAACCTTTTCAGAATTTAGTTTGACCACAGGCAAGAATTGGAGATAACCAAACTTTTACAAG
CDS Sequence
Protein Sequence