Gene Details:
- Gene ID: AT4G18670
- Gene Symbol: LRX5
- Gene Name: leucine-rich repeat extensin 5
- Description: Leucine-rich repeat (LRR) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
Literature:
- Whole-genome comparison of leucine-rich repeat extensins in Arabidopsis and rice. A conserved family of cell wall proteins form a vegetative and a reproductive clade. DOI: 10.1104/pp.102.014928 ; PMID: 12644681
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids. DOI: 10.1104/pp.106.090662 ; PMID: 17189325
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Leucine-rich repeat extensin proteins regulate plant salt tolerance in Arabidopsis. DOI: 10.1073/pnas.1816991115 ; PMID: 30514814
Sequences:
cDNA Sequence
- >AT4G18670.1
AATCAATCATGTGATTAGTTCAAAAAAGAAACCAAAAAGTCGATCATACATTTATATAATTGTTAGGTAATTCATGGACACACATCAATTAATTAACATTACACTTTTGACAGTGTAAAACAGACAGTGTTATAATAAGTGAAGAGTATATGAATAGGGCTGAGCTGTGCAAAGACCTGTCTCTCTCTCACTTATAATTCCCTCTTCACACATTACTTCTTCACTTATAGAGATTCTCACTTACATTTCCCATTTTACCCTTCTTCTTCCTTCAAATCCACTGATGTCTTGTTATGTGAAGTAATGAAGACGAAGATGATGATGAAGAACACGTCTCTGATCTTTGTTCTTCTTTTTATCACCTTCTTCTTCACAAGTATCTCTTACTCTCTTTCACTTACTTTCAATGGAGATCTCTCCGACAATGAAGTCCGGCTAATCACACAACGTCAACTTCTCTACTTCCGCGACGAGTTCGGCGACCGCGGCGAGAATGTCGACGTTGACCCATCTCTAGTCTTCGAGAATCCACGACTTCGAAATGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCAAACAACTTCACAACAAACTGGATCGGTTCTGATGTTTGCAGTTACACCGGCGTTTACTGTGCTCCGGCTTTAGATAACCGCCGGATCCGTACCGTCGCCGGAATAGATCTAAACCACGCTGACATTGCTGGTTATCTACCTCAAGAGCTTGGTTTGTTAACAGATCTCGCTTTGTTTCATATTAATTCAAACCGGTTTTGTGGAACCGTACCGCATCGGTTTAACCGTCTTAAGCTTTTATTCGAGCTTGATCTCAGTAATAACCGGTTCGCCGGAATATTCCCTACTGTTGTCCTTCAGTTACCGTCGTTGAAGTTTCTGGATCTAAGGTTTAACGAATTCGAAGGACCTGTACCAAGAGAGCTCTTCAGCAAAGATCTTGATGCGATTTTTATCAACCATAACCGGTTCCGGTTTGAGTTACCGGATAATTTGGGAGATTCTCCGGTTTCCGTTATTGTTGTGGCGAATAATCATTTCCACGGTTGTATTCCGACGAGTTTGGGTGATATGAGGAATCTTGAAGAGATCATCTTCATGGAAAATGGGTTTAATTCTTGTTTACCGTCGCAGATCGGACGGTTGAAAAACGTAACGGTATTTGATTTCAGTTTTAACGAACTTGTTGGGTCGTTACCGGCGAGTATTGGCGGGATGGTTTCGATGGAGCAGTTAAATGTGGCGCATAATAGATTCTCTGGTAAGATTCCGGCGACTATTTGTCAGTTGCCGAGGTTGGAGAATTTCACTTTCAGTTATAATTTCTTCACTGGAGAGCCGCCGGTTTGTCTTGGGTTGCCTGGGTTTGATGATCGGCGGAATTGTTTGCCGGCGAGACCTGCGCAGAGATCACCAGGGCAATGTGCGGCTTTCTCTTCTCTTCCGCCGGTGGATTGTGGTTCCTTTGGATGTGGTCGTTCTACTCGGCCTCCAGTTGTTGTCCCATCACCGCCTACAACTCCGTCTCCGGGTGGTTCTCCTCCTTCGCCTTCTATTTCTCCTAGTCCACCGATCACTGTCCCGTCACCGCCGACAACTCCATCTCCTGGTGGTTCTCCTCCTTCACCGTCTATTGTCCCGTCTCCTCCTTCAACTACGCCATCTCCTGGTTCTCCTCCTACATCGCCGACGACACCTACTCCTGGTGGTTCTCCTCCATCATCGCCGACGACACCAACTCCTGGTGGTTCTCCTCCATCATCGCCGACGACACCTACTCCTGGTGGTTCTCCTCCATCATCGCCGACAACACCTTCTCCCGGTGGTTCTCCTCCTTCACCGTCTATTTCTCCTAGTCCTCCGATCACTGTCCCGTCTCCTCCGTCAACCCCAACATCTCCTGGTTCTCCTCCTTCGCCATCTAGTCCAACTCCGAGCTCTCCTATTCCTAGTCCTCCTACGCCATCAACTCCGCCAACTCCGATATCACCTGGTCAAAATTCACCGCCTATTATTCCTAGTCCACCGTTCACCGGCCCTTCTCCGCCGTCGTCACCTAGTCCTCCTTTACCGCCTGTTATTCCTAGTCCTCCCATTGTAGGCCCGACTCCATCGTCTCCTCCGCCGTCAACACCTACTCCGGTTTACTCTCCTCCCCCGCCGTCTACAGGGTACCCTCCTCCCCCGCCGTTTACAGGGTACTCTCCTCCATCCCCACCACCTCCTCCTCCCCCAACTTTCTCACCTTCCCCATCAATACCTCCACCACCGCCTCAGACATATTCTCCCTTCCCGCCACCGCCACCTCCTCCGCCGCAAACATACTATCCACCGCAACCATCTCCATCACAACCCCCGCAATCTCCAATTTACGGCACTCCCCCTCCTTCCCCTATACCTTACTTGCCGTCACCGCCTCAATTTGCATCCCCACCACCACCAGCCCCTTACTACTACAGCTCACCACAACCACCGCCGCCGCCACATTACTCATTACCACCACCAACCCCTACTTATCACTATATATCCCCACCACCTCCACCAACGCCAATACACTCCCCTCCGCCACAATCACATCCACCGTGCATAGAATACTCACCACCTCCACCTCCAACAGTCCATTATAATCCTCCACCACCACCATCACCGGCGCACTACAGTCCTCCGCCTTCACCACCAGTTTACTACTACAATTCACCTCCACCTCCACCGGCTGTCCACTACAGCCCACCACCTCCACCGGTAATACACCACAGCCAACCACCACCACCTCCAATCTACGAAGGGCCACTACCGCCGATTCCCGGAATATCATACGCATCTCCTCCGCCGCCTCCCTTCTATTGATTCTTTTTCAGAATGTTCTCAAAAGGGGCCCACCACTTATGCCAAAACCCGAAAACGAAACGGTGTCGTGTCGTGTCAATAACACTTATCCGATTGATAGAAACATGTAACACGGCGTCGTTTGACCATTTCTTGGAGAGAGATGTACGTGTTGGTGGTTGGGTATTCTCCGAAAGATTTATTTCGGTGAACAAAATTTTAAAAAGAAGAAAATTAGGCGTTTTTCAGGGAAAAGTTGTATAAATAGATTAATTAAAATATGGAGCAACCTCATATTTATGCTCCTTATATTTCTTATTAGTGTTCTTAAATAATTATCATTGTTTTTTTTATTAAACTTTATCATTGTTACTTCATTTTTTGTGTTTTTTCTTTCTGGTTATCTTTTTCTTCTCATATATGAAATTATCTTTTTTGTATTTCCTTATTTAATTACTGCAACTTTTTGCCTATGTT
CDS Sequence
Protein Sequence