Information report for AT4G18370
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009543 — located in — chloroplast thylakoid lumen
- GO:0004252 — enables — serine-type endopeptidase activity
- GO:0005576 — located in — extracellular region
- GO:0031977 — located in — thylakoid lumen
- GO:0009579 — located in — thylakoid
- GO:0009507 — located in — chloroplast
- GO:0005829 — located in — cytosol
- GO:0010206 — acts upstream of or within — photosystem II repair
Functional Keywords
Literature and News
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Chloroplast and mitochondrial proteases in Arabidopsis. A proposed nomenclature. DOI: 10.1104/pp.125.4.1912 ; PMID: 11299370
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Deg proteases and their role in protein quality control and processing in different subcellular compartments of the plant cell. DOI: 10.1111/j.1399-3054.2011.01533.x ; PMID: 22008015
- The family of Deg/HtrA proteases in plants. DOI: 10.1186/1471-2229-12-52 ; PMID: 22520048
- Cooperative D1 degradation in the photosystem II repair mediated by chloroplastic proteases in Arabidopsis. DOI: 10.1104/pp.112.199042 ; PMID: 22698923
- Using the SUBcellular database for Arabidopsis proteins to localize the Deg protease family. DOI: 10.3389/fpls.2014.00396 ; PMID: 25161662
- Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis. DOI: 10.3389/fpls.2016.00168 ; PMID: 26909098
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A1P8B643
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B643
- EnsemblPlants: AT4G18370.2
- Gramene: AT4G18370.2
- ExpressionAtlas: AT4G18370
- InterPro: IPR001940, IPR009003, IPR043504
- PANTHER: PTHR43343, PTHR43343:SF6
- SUPFAM: SSF50494
- Gene3D: 2.40.10.10
- SWISS-MODEL: A0A1P8B643
Sequences
cDNA Sequence
- >AT4G18370.2
ATGATTTATAAAAGAGTTGGGAGTCCACAAAATATTGGTTATATTGTGAGTGGGTAATGGATGTTGTTCAGAGGATCAGGTAGTTAGTACTCTGCTGTTTTAAAATCCAATAGACTTTGGTTAACAAATTGTTTAAATCACAAAACCATTTACGGTTCGACCGAAAGAACCGAATTTTATTCTCTCTGCCTTATCACCTCTGAGTGGAAAAAATTGAGTGAGCGCCATTGTAGGAGAGCTTCGGGAAAGAAGAAGAAGAAGAAGAAGCCATGACCATGGCTCTTGCTTCTTCTAAAGCTTTTTCCTCAATCTTCAATACTTTATCACCAATCAATCAGTCGAAATTTGTGTTAGCTTGCTCTGGTTCAAATCATGTAGACGTCATTGATCGGAGAAGAAGAATCATGATCTTTGGCTCGAGTTTGGCTCTCACGTCGTCTCTGCTTGGTTCCAATCAACAGAGACTTCCGATGGAATCCGCAATCGCATTGGAGCAATTCAAAGAAAAAGAAGAAGAGCTTGAGGAAGAAGAAGAGAGAAATGTCAATCTCTTCCAGAAAACTTCGCCGTCTGTTGTTTACATTGAAGCTATTGAGCTTCCCAAAACGTCTTCTGGTGATATACTCACTGATGAGGAAAATGGAAAGATCGAAGGGACAGGTTCAGGCTTCGTTTGGGATAAGCTTGGTCACATTGTTACAAATTATCATGTTATTGCTAAGTTAGCTACTGATCAGTTTGGATTACAACGTTGTAAGGTGTCTCTAGTTGATGCTAAGGGAACAAGATTTAGCAAGGAAGGGAAAATTGTGGGTCTTGATCCAGATAATGATCTAGCTGTGTTGAAGATTGAAACTGAGGGACGTGAACTAAATCCTGTTGTTCTCGGTACCTCCAATGATCTACGCGTAGGTCAAAGTTGCTTTGCGATTGGGAATCCATATGGATATGAAAACACCTTGACAATAGGGGTAGTAAGTGGGTTGGGAAGAGAGATACCTTCACCTAATGGGAAGAGTATTTCAGAAGCTATACAAACCGATGCTGATATTAACTCAGGTATGTAA - >AT4G18370.1
ATGATTTATAAAAGAGTTGGGAGTCCACAAAATATTGGTTATATTGTGAGTGGGTAATGGATGTTGTTCAGAGGATCAGGTAGTTAGTACTCTGCTGTTTTAAAATCCAATAGACTTTGGTTAACAAATTGTTTAAATCACAAAACCATTTACGGTTCGACCGAAAGAACCGAATTTTATTCTCTCTGCCTTATCACCTCTGAGTGGAAAAAATTGAGTGAGCGCCATTGTAGGAGAGCTTCGGGAAAGAAGAAGAAGAAGAAGAAGCCATGACCATGGCTCTTGCTTCTTCTAAAGCTTTTTCCTCAATCTTCAATACTTTATCACCAATCAATCAGTCGAAATTTGTGTTAGCTTGCTCTGGTTCAAATCATGTAGACGTCATTGATCGGAGAAGAAGAATCATGATCTTTGGCTCGAGTTTGGCTCTCACGTCGTCTCTGCTTGGTTCCAATCAACAGAGACTTCCGATGGAATCCGCAATCGCATTGGAGCAATTCAAAGAAAAAGAAGAAGAGCTTGAGGAAGAAGAAGAGAGAAATGTCAATCTCTTCCAGAAAACTTCGCCGTCTGTTGTTTACATTGAAGCTATTGAGCTTCCCAAAACGTCTTCTGGTGATATACTCACTGATGAGGAAAATGGAAAGATCGAAGGGACAGGTTCAGGCTTCGTTTGGGATAAGCTTGGTCACATTGTTACAAATTATCATGTTATTGCTAAGTTAGCTACTGATCAGTTTGGATTACAACGTTGTAAGGTGTCTCTAGTTGATGCTAAGGGAACAAGATTTAGCAAGGAAGGGAAAATTGTGGGTCTTGATCCAGATAATGATCTAGCTGTGTTGAAGATTGAAACTGAGGGACGTGAACTAAATCCTGTTGTTCTCGGTACCTCCAATGATCTACGCGTAGGTCAAAGTTGCTTTGCGATTGGGAATCCATATGGATATGAAAACACCTTGACAATAGGGGTAGTAAGTGGGTTGGGAAGAGAGATACCTTCACCTAATGGGAAGAGTATTTCAGAAGCTATACAAACCGATGCTGATATTAACTCAGGTATGTAA - >AT4G18370.3
ATGATTTATAAAAGAGTTGGGAGTCCACAAAATATTGGTTATATTGTGAGTGGGTAATGGATGTTGTTCAGAGGATCAGGTAGTTAGTACTCTGCTGTTTTAAAATCCAATAGACTTTGGTTAACAAATTGTTTAAATCACAAAACCATTTACGGTTCGACCGAAAGAACCGAATTTTATTCTCTCTGCCTTATCACCTCTGAGTGGAAAAAATTGAGTGAGCGCCATTGTAGGAGAGCTTCGGGAAAGAAGAAGAAGAAGAAGAAGCCATGACCATGGCTCTTGCTTCTTCTAAAGCTTTTTCCTCAATCTTCAATACTTTATCACCAATCAATCAGTCGAAATTTGTGTTAGCTTGCTCTGGTTCAAATCATGTAGACGTCATTGATCGGAGAAGAAGAATCATGATCTTTGGCTCGAGTTTGGCTCTCACGTCGTCTCTGCTTGGTTCCAATCAACAGAGACTTCCGATGGAATCCGCAATCGCATTGGAGCAATTCAAAGAAAAAGAAGAAGAGCTTGAGGAAGAAGAAGAGAGAAATGTCAATCTCTTCCAGAAAACTTCGCCGTCTGTTGTTTACATTGAAGCTATTGAGCTTCCCAAAACGTCTTCTGGTGATATACTCACTGATGAGGAAAATGGAAAGATCGAAGGGACAGGTTCAGGCTTCGTTTGGGATAAGCTTGGTCACATTGTTACAAATTATCATGTTATTGCTAAGTTAGCTACTGATCAGTTTGGATTACAACGTTGTAAGGTGTCTCTAGTTGATGCTAAGGGAACAAGATTTAGCAAGGAAGGGAAAATTGTGGGTCTTGATCCAGATAATGATCTAGCTGTGTTGAAGATTGAAACTGAGGGACGTGAACTAAATCCTGTTGTTCTCGGTACCTCCAATGATCTACGCGTAGGTCAAAGTTGCTTTGCGATTGGGAATCCATATGGATATGAAAACACCTTGACAATAGGGGTAGTAAGTGGGTTGGGAAGAGAGATACCTTCACCTAATGGGAAGAGTATTTCAGAAGCTATACAAACCGATGCTGATATTAACTCAGGTATGTAA
CDS Sequence
Protein Sequence