Gene Details:
- Gene ID: AT4G17950
- Gene Symbol: AHL13
- Gene Name: AT-hook motif nuclear localized protein 13
- Description: AT hook motif DNA-binding family protein;(source:Araport11)
- TAIR Accession: locus:2141045
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0048580 — acts upstream of or within — regulation of post-embryonic development
- GO:0014070 — acts upstream of or within — response to organic cyclic compound
- GO:0010228 — acts upstream of or within — vegetative to reproductive phase transition of meristem
- GO:0048827 — acts upstream of or within — phyllome development
- GO:0006396 — acts upstream of or within — RNA processing
- GO:0090567 — acts upstream of or within — reproductive shoot system development
- GO:0033993 — acts upstream of or within — response to lipid
- GO:0005515 — enables — protein binding
- GO:0009888 — acts upstream of or within — tissue development
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0005575 — is active in — cellular_component
- GO:0003680 — enables — minor groove of adenine-thymine-rich DNA binding
- GO:0050793 — acts upstream of or within — regulation of developmental process
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0010605 — acts upstream of or within — negative regulation of macromolecule metabolic process
Function-related keywords:
Literature:
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Arabidopsis thaliana AHL family modulates hypocotyl growth redundantly by interacting with each other via the PPC/DUF296 domain. DOI: 10.1073/pnas.1219277110 ; PMID: 24218605
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Chromatin phosphoproteomics unravels a function for AT-hook motif nuclear localized protein AHL13 in PAMP-triggered immunity. DOI: 10.1073/pnas.2004670118 ; PMID: 33419940
Sequences:
cDNA Sequence
- >AT4G17950.1
AAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGTTAGCTAGCTCACACGCTTTCGCTTAAAACTCAAAAACCTGCACTTTCTCGTCTATTTTCTCGGCATTCGTAAAACAGAAAAGTGGGTCTCCAAGAAAATTACCCTAAATTCACAAAGATTCATACTTTTCTCCACCTCCAATGGATTCCAGAGAGATCCACCACCAACAACAGCAACAACAACAACAACAACAGCAGCAGCAGCAACAACAGCAACATCTACAACAACAGCAACAACCACCGCCAGGGATGTTAATGAGTCACCACAATTCCTACAATCGAAACCCTAACGCCGCCGCCGCTGTTTTAATGGGTCACAACACCTCCACATCTCAAGCTATGCATCAAAGATTACCTTTTGGTGGTTCTATGTCACCGCATCAGCCTCAACAACATCAGTATCATCATCCTCAGCCTCAGCAACAGATAGATCAGAAGACTCTTGAATCTCTTGGATTTGATGGATCGCCTTCTTCTGTTGCCGCCACTCAACAACATTCGATGAGATTTGGGATCGACCATCAACAGGTTAAGAAGAAACGAGGTAGACCTAGGAAGTATGCTGCTGATGGTGGTGGTGGTGGTGGTGGTGGTAGTAACATTGCTCTTGGTTTGGCTCCTACTTCGCCTCTTCCTTCTGCTTCTAATTCTTACGGTGGTGGAAATGAAGGAGGTGGTGGTGGTGATAGCGCCGGAGCTAATGCTAACTCTTCCGATCCACCTGCTAAACGGAACAGAGGACGTCCTCCTGGCTCCGGTAAGAAGCAGCTCGATGCTTTAGGAGGAACAGGAGGAGTTGGGTTCACGCCTCATGTCATTGAGGTTAAAACAGGAGAGGACATAGCTACGAAGATATTGGCGTTTACGAACCAAGGGCCACGCGCAATCTGTATTCTCTCAGCTACAGGAGCTGTAACTAATGTGATGCTTCGTCAAGCTAACAATAGCAATCCTACTGGAACTGTTAAGTATGAGGGCCGATTTGAAATCATTTCTCTGTCAGGTTCTTTCTTGAATTCTGAGAGTAATGGTACTGTGACCAAAACTGGTAACTTGAGTGTGTCGCTGGCTGGACACGAAGGCCGGATTGTGGGTGGATGTGTTGATGGAATGCTAGTAGCTGGATCACAAGTCCAGGTCATTGTGGGAAGCTTTGTACCAGATGGAAGGAAGCAGAAACAAAGTGCGGGGCGTGCTCAGAATACTCCGGAGCCAGCTTCAGCACCAGCCAATATGTTGAGCTTTGGTGGTGTTGGTGGACCGGGAAGCCCTCGATCTCAAGGACAACAACACTCGAGCGAGTCATCAGAGGAAAACGAAAGTAATTCTCCGTTGCACCGTAGAAGCAACAACAACAACAGCAACAATCATGGGATATTTGGAAACTCTACACCTCAACCGCTTCACCAAATTCCTATGCAGATGTACCAGAATCTCTGGCCTGGCAACAGTCCTCAATAAACAGATGGTTCATGGGTCAAGATTTGACCGGGTTTGCTTCTCTGTTCCTTTTGACACATCTCTCCATCAGATTTATCTCTATAAAGTAGATTGAGCTCTCTTACTCTCTCATCTTCTTCTCCTTTACTATTTCTCTTAAATTTAGCTTTGGTTTTAGATAAATAGAGAGAGAGAGACATGTTAAGTAGGTTTCAAATTCAATCTTGTTTAGTTTGTTTCTTAGTAGTTTCTTTTGATTGTGATGATCATAAAGACTTGTTCTTTTTCTCCTATATTCAACGAATTATCCACTTTAATTCTGATTCTAAACAACGAAATTCTAAACTATACAAAAGCACTTTTATTCTCTTATAATAAGGTTACATTCGTTTTCTTTCACATACATGTTTTCATTACTCTTCAGGTTATTACAACAAAAGTTAGTAAAAAGACAGTGAAATAGACAAAAAAAAGGTTGATACTTGATACATAATCTTAGTCTCCATTACTTCTTCTTCATCTTCGTCGTGTTAGTCTCTAAACTGCAGAAACCATGAGTGGTGATGCAGCCATCCATTCTTCTTCTTCTTCTTCTT
CDS Sequence
Protein Sequence