Gene Details:
- Gene ID: AT4G17895
- Gene Symbol: UBP20
- Gene Name: ubiquitin-specific protease 20
- Description: ubiquitin-specific protease 20;(source:Araport11)
- TAIR Accession: locus:505006491
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:0005829 — is active in — cytosol
- GO:0005634 — is active in — nucleus
- GO:0004843 — enables — cysteine-type deubiquitinase activity
- GO:0016579 — involved in — protein deubiquitination
- GO:0005634 — located in — nucleus
Function-related keywords:
Literature:
- The ubiquitin-specific protease family from Arabidopsis. AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine. DOI: 10.1104/pp.124.4.1828 ; PMID: 11115897
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- UBIQUITIN-SPECIFIC PROTEASES function in plant development and stress responses. DOI: 10.1007/s11103-017-0633-5 ; PMID: 28695315
Sequences:
cDNA Sequence
- >AT4G17895.1
AACACACTTTACAGTTTTACGACGCCCAAAATTCAATTCCCGGAGATTAAAAACCCTAAAACAAACACTGGCGATTCGATTTTCCCTCCCAATTCAAATCATCTCTTAATCTTCTTCTTCTCACTATCCTCTCAAATTCGCCGCCGATCTTCCATCAATTTTGATTTCTCGCACCGAAATTTCGACTTTTCATCTCCTATCGACGAAACCCTAATTTTTCACACTCCAGAAATCGAACTTTGACGACGATGTTAATGGCTAAACCCGACGTACCTTCATCGATTTTACCTCGTTCGTCGTCGATACTTCCCAACTCGATCGAAACCCTAGATGAGAACGAGTCGATTGAAGCACAAGTTAATAATGTTCAGTCATTGGCTCTTTCGTCCCCAAATCGAGATCGCAGCGATGATGATGATAATAATAATAATCATGATTCGGTTTCAATTCCGCCTCCGATCTATGATGGGTATAGCTCTTCTTCCTCTGACGAATCCCAGTCCGTTCCTTCTCCTCCGATCAATTTGGATCACGATGATGATGAGTGTCAGATTCCAATCAGGAATACTTCGCAAGCTCTAGACGATATCGACGATGATATCTGGGGCGATGATGATCTCCCAGAGACTCGCAGACCTTGGACTCCTAATGTTTCGCCTGGTTTTGGAAGCGATGATGATGATGACAATGATGATGACAACTCTAAAAATGAACCTCGCAAATCCTTGTTCTATGGTTTCCGGCAAGAACCTGAGCCTGTTACTGGTGTGGGAGCTGGGCTTTGGAATTTAGGCAACAGTTGTTTCCTTAATTCGGTGTTTCAATGCTTCACTCATACTGTGCCACTTATCGAGAGCCTTCTTTCTTTCAGATATGAAGTTCCATGTCACTGTGGGAATGAGTTCTTCTGTGTTATAAGGGCTATTCGCTATCACATTGAGGCTGCATTGAGGCCTGAGAGATGTCCAATTGCTCCGTATTTTTTTTTTGACAATCTTAACTATTTTTCACCTGACTTCCAGCGTTATCAACAAGAAGACGCTCATGAGTTTCTGCAAGCATTTTTGGAGAAGTTGGAGATATGTGGTTCGGATCGAACAAGTTTTCGTGGCGATATCACTTCTCAAGATGTCTTTTCTGGTCGTCTCATCAGTGGGCTACGTTGCTGCAACTGTGACTACGTCTCCGAGACATATGAAAAGTCAGTTGGGTTGAGTTTGGAAATTGAGGATGTGGATACCCTTGGAAGTGCACTAGAATCCTTTACCCGTGTGGAGAAACTTGATGAGCAATTGACATGCGACAACTGTAATGAAAAAGTTTCAAAGGAGAAGCAACTGTTGCTTGATAAGCTCCCTTTGGTTGCCACTTTCCATTTGAAGAGATTCAAGAATAATGGGTTATATATGGAGAAGATCTATAAGCATGTCAAGATCCCATTAGAGATAGACTTGCAGCCATATATGAGGAATATCCAGGAAAACGAAGTTTCTACAAAATACCATCTTTATGCTCTGGTGGAACATTTTGGGTATTCAGTAGCTTATGGACATTACTCCTCCTATGTGAGATCAGCTCCTAAGATATGGCATCACTTTGATGATTCGAAGGTCACTAGAATAGATGAAGATATGGTGCTATCACAGGATTCGTATATTCTTTTTTATGCACGAGAAGGAACTCGCTGGTTTTCTAGTGTCTATGAAGAGATGCAGCCATTGGTTGAAGCGAGTTTACTAAATTCGTCCCCAAAGTCTGTGCTTGATTCCTCTACTAACGGGGAGTGTTTATCAGAGATCAGTTATGAGAATGGCGATAAAGCAAGCAAACCCTGCGATTCTGCTGGAGTGTGTAACCAACATGTCAAGACGAAAGAAGATTTTGTTTCCCTCTCTAATGATGATGTGTTTCTATCAGCAGAGTCTTCTAGTGGCGAGGAGTCTCCTATGGGAGAGCTTTTGGACCCGCTTGATCCTGATGATTCTTACAGTCCATGCACTGAGAAAGAATCAGATTCTTGTTTAGCCATTGAAAGAGCTACCATTCGTGATGATTTTTTTCCTCTGCTCCTGGATCAAAATCAAGAGTCGTCGACGTCGTCTCCAAAACTGCAAGAAAGAACTTTTGAAATGCAGCTCTTGCAAATGGAAGAAACCACAAAGAGCCAAGAACCTTGGAAGCAGCCATTATCATCAATAAGCAATATCGCAGATTCCATGGAAGCAGAATTTGTGTATGGAGACCTCATGAAGAAACCTTCACCTCGTGCTAGAGAGTTGTTGGATCAAGCCATTTCTACAAATGGTTCTCCTCCCAAAAAGTTAAAAACAACATGAAAATGTGATCTGCTTCTGGACACAGAGAGGTATCATGTCGACTTTCTTGATCGCTAGCTACAAACTTCTTCTAGGTGTTATAATTGACTTTGATTTAGACTAAATCAGGCTTTAATCGTTTTTGTTTCGTGCATACTAGTAGTTCTGGTGCTTTTGACTTGGTTAAGCAAGGATTAAGAATCTAATAAAGCTTTAGATTCTGTTATTGGTTTTTGCTTCTTTTTCTCCGACCATTGATTCACCTCTTTTTGTTCGAACCTGAAAACCCCAAGTCCTGAGACCATTAAGAC
CDS Sequence
Protein Sequence