Information report for AT4G17890
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0006082 — acts upstream of or within — organic acid metabolic process
- GO:0048205 — involved in — COPI coating of Golgi vesicle
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0044087 — acts upstream of or within — regulation of cellular component biogenesis
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0005634 — located in — nucleus
- GO:0009832 — acts upstream of or within — plant-type cell wall biogenesis
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- RPA, a class II ARFGAP protein, activates ARF1 and U5 and plays a role in root hair development in Arabidopsis. DOI: 10.1104/pp.106.077818 ; PMID: 16731582
- High rate of recent intron gain and loss in simultaneously duplicated Arabidopsis genes. DOI: 10.1093/molbev/msl017 ; PMID: 16720694
- SCARFACE encodes an ARF-GAP that is required for normal auxin efflux and vein patterning in Arabidopsis. DOI: 10.1105/tpc.105.039008 ; PMID: 16698946
- Functional characterization of the Arabidopsis ubiquitin-specific protease gene family reveals specific role and redundancy of individual members in development. DOI: 10.1111/j.1365-313X.2008.03557.x ; PMID: 18485060
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Recruitment of Arf1-GDP to Golgi by Glo3p-type ArfGAPs is crucial for golgi maintenance and plant growth. DOI: 10.1104/pp.112.209148 ; PMID: 23266962
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
Gene Resources
- UniProt: A0A178UXQ2
- EMBL: CACSHJ010000095, LR881469, LUHQ01000004
- AlphaFoldDB: A0A178UXQ2
- EnsemblPlants: AT4G17890.1
- Gramene: AT4G17890.1
- KEGG: ath:AT4G17890
- Orthologous matrix: KAGGIWE
- ExpressionAtlas: AT4G17890
- InterPro: IPR001164, IPR037278, IPR038508
- PANTHER: PTHR45686, PTHR45686:SF11
- SUPFAM: SSF57863
- PROSITE: PS50115
- Gene3D: 1.10.220.150
- OrthoDB: A0A178UXQ2
- SWISS-MODEL: A0A178UXQ2
- Conserved Domain Database: cd08831
Sequences
cDNA Sequence
- >AT4G17890.1
AAGCTTTCGTCCGTTTTATATCATCCATGTTGCTTCAGAAACGGAATTTACACACTACGTGTCGTTTCTACGTAATGCCATTTTCGTAATTTCTAGAGTTTATTCAGGGTGTTTTCGTCAGTCTAGTCAGATCAAATGTTTCCATCAAACGTTAGTACTGTTTCCTTTAGATTTACAGATTTTGAAGAAGAAAGATTTCAAATTAAAAAATCTTTCAAATTTCTTCAAGGAGGTGATCAAATTGAACAATTTGATCTACAATGGCTTCTTCTTCTGCTGACAATCTTACCGACAAAAACATTGTTTTCAGAAAACTCAAATCAAAATCTGAGAACAAGGTCTGCTTCGATTGTAGTGCGAAGAATCCAACTTGGGCATCGGTTACATATGGGATTTTCCTCTGCATCGATTGTTCAGCTACTCACCGGAATCTTGGTGTTCATATCAGCTTCGTCAGATCAACGAATTTAGACTCTTGGAGCCCGGAGCAGCTCAGGACAATGATGTTTGGTGGTAACAACCGTGCTCAGGTTTTCTTCAAGCAACATGGATGGACTGATGGTGGCAAAATTGAAGCTAAGTATACTTCAAGAGCTGCTGATTTGTATCGGCAGATTCTTGCTAAAGAAGTTGCGAAAGCGATTGCGGAAGAAACTAATTCTGGTCTTCTGTCATCTCCCGTTGCTACTTCTCAGTTACCGGAAGTATCTAATGGGGTTTCTTCTTATTCTGTCAAGGAAGAGTTACCTCTTTCGAAACATGAAGCTACCAGTGCTACTTCTTCGCCTAAAGCTTCTAATACAGTTGTGCCTAGTACGTTTAAGAAACCTATTGGTGCTAAAAGGACAGGAAAAACTGGTGGTCTTGGTGCAAGGAAGCTTACTACTAAGCCAAAAGACAATCTCTATGAGCAGAAACCGGAAGAAGTTGCACCGGTTATTCCCGCTGTATCATCAACAAATAACGGGGAAAGCAAATCATCAGCTGGTTCATCATTTGCCTCTCGGTTTGAGTACAATGACGACCTGCAATCTGGAGGACAAAGCGTTGGTGGTACACAAGTGCTTAACCATGTTGCTCCACCAAAGTCGTCAAGCTTCTTTTCGGATTTTGGAATGGACAGTTCTTTTCCCAAGAAATCAAGCTCCAACTCTTCAAAATCTCAAGTTGAAGAATCAGATGAAGCAAGAAAGAAGTTCACAAACGCAAAGTCCATATCTTCAGCTCAGTACTTTGGGGATCAGAACAAAAACGCTGATCTGGAATCAAAAGCTACTCTTCAGAAGTTTGCAGGCTCAGCATCTATCTCAAGCGCTGATTTTTACGGTCACGACCAAGATGATTCCAATATTGATATAACAGCTAGTGATCTCATTAACCGACTTTCTTTCCAGGCGCAACAAGATCTATCGTCGCTGGTGAACATAGCAGGAGAAACAAAGAAGAAGCTTGGAACTTTGGCTTCTGGTATCTTCAGTGATATTCAAGACAGAATGCTGTAAGAAGACCACGAGTCTCTCACATGTTTTTGATATTGACAGAGAAAAAAAAGTAAGAAAGAAGCTTTGTCGGAAAACTTCCAATGAGGTTCACGTTTCTCTGTTTTTATTTTATAGAACTTTTTTTTGAAAACTATTGAGACGTGGCTATTGTTGTTATCATCAAAATCTATATTGATACTATTATACTCGATATGTTATAGACTTTATTAAAAAAAACTTTGTTTGTTTGCAGAAAGTGGATTTTTAATCAAATTTAATTGTGATGATTACAATGTCAATTGGTTATGCAAGATATTAATTAATATGTTTAAGATTTTTCACTTTTAATAAGTAAAATAAAATACGTC - >AT4G17890.2
AAGCTTTCGTCCGTTTTATATCATCCATGTTGCTTCAGAAACGGAATTTACACACTACGTGTCGTTTCTACGTAATGCCATTTTCGTAATTTCTAGAGTTTATTCAGGGTGTTTTCGTCAGTCTAGTCAGATCAAATGTTTCCATCAAACGTTAGTACTGTTTCCTTTAGATTTACAGATTTTGAAGAAGAAAGATTTCAAATTAAAAAATCTTTCAAATTTCTTCAAGGAGGTGATCAAATTGAACAATTTGATCTACAATGGCTTCTTCTTCTGCTGACAATCTTACCGACAAAAACATTGTTTTCAGAAAACTCAAATCAAAATCTGAGAACAAGGTCTGCTTCGATTGTAGTGCGAAGAATCCAACTTGGGCATCGGTTACATATGGGATTTTCCTCTGCATCGATTGTTCAGCTACTCACCGGAATCTTGGTGTTCATATCAGCTTCGTCAGATCAACGAATTTAGACTCTTGGAGCCCGGAGCAGCTCAGGACAATGATGTTTGGTGGTAACAACCGTGCTCAGGTTTTCTTCAAGCAACATGGATGGACTGATGGTGGCAAAATTGAAGCTAAGTATACTTCAAGAGCTGCTGATTTGTATCGGCAGATTCTTGCTAAAGAAGTTGCGAAAGCGATTGCGGAAGAAACTAATTCTGGTCTTCTGTCATCTCCCGTTGCTACTTCTCAGTTACCGGAAGTATCTAATGGGGTTTCTTCTTATTCTGTCAAGGAAGAGTTACCTCTTTCGAAACATGAAGCTACCAGTGCTACTTCTTCGCCTAAAGCTTCTAATACAGTTGTGCCTAGTACGTTTAAGAAACCTATTGGTGCTAAAAGGACAGGAAAAACTGGTGGTCTTGGTGCAAGGAAGCTTACTACTAAGCCAAAAGACAATCTCTATGAGCAGAAACCGGAAGAAGTTGCACCGGTTATTCCCGCTGTATCATCAACAAATAACGGGGAAAGCAAATCATCAGCTGGTTCATCATTTGCCTCTCGGTTTGAGTACAATGACGACCTGCAATCTGGAGGACAAAGCGTTGGTGGTACACAAGTGCTTAACCATGTTGCTCCACCAAAGTCGTCAAGCTTCTTTTCGGATTTTGGAATGGACAGTTCTTTTCCCAAGAAATCAAGCTCCAACTCTTCAAAATCTCAAGTTGAAGAATCAGATGAAGCAAGAAAGAAGTTCACAAACGCAAAGTCCATATCTTCAGCTCAGTACTTTGGGGATCAGAACAAAAACGCTGATCTGGAATCAAAAGCTACTCTTCAGAAGTTTGCAGGCTCAGCATCTATCTCAAGCGCTGATTTTTACGGTCACGACCAAGATGATTCCAATATTGATATAACAGCTAGTGATCTCATTAACCGACTTTCTTTCCAGGCGCAACAAGATCTATCGTCGCTGGTGAACATAGCAGGAGAAACAAAGAAGAAGCTTGGAACTTTGGCTTCTGGTATCTTCAGTGATATTCAAGACAGAATGCTGTAAGAAGACCACGAGTCTCTCACATGTTTTTGATATTGACAGAGAAAAAAAAGTAAGAAAGAAGCTTTGTCGGAAAACTTCCAATGAGGTTCACGTTTCTCTGTTTTTATTTTATAGAACTTTTTTTTGAAAACTATTGAGACGTGGCTATTGTTGTTATCATCAAAATCTATATTGATACTATTATACTCGATATGTTATAGACTTTATTAAAAAAAACTTTGTTTGTTTGCAGAAAGTGGATTTTTAATCAAATTTAATTGTGATGATTACAATGTCAATTGGTTATGCAAGATATTAATTAATATGTTTAAGATTTTTCACTTTTAATAAGTAAAATAAAATACGTC
CDS Sequence
Protein Sequence