Information report for AT4G17880
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005515 — enables — protein binding
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0106167 — acts upstream of or within — extracellular ATP signaling
- GO:2000652 — acts upstream of or within — regulation of secondary cell wall biogenesis
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0043425 — enables — bHLH transcription factor binding
- GO:0006952 — acts upstream of or within — defense response
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0005634 — located in — nucleus
- GO:0046983 — enables — protein dimerization activity
- GO:0010374 — acts upstream of or within — stomatal complex development
- GO:0009718 — acts upstream of or within — anthocyanin-containing compound biosynthetic process
- GO:0005634 — is active in — nucleus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) function as transcriptional activators in abscisic acid signaling. DOI: 10.1105/tpc.006130 ; PMID: 12509522
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis. DOI: 10.1105/tpc.022319 ; PMID: 15208388
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The Arabidopsis bHLH transcription factors MYC3 and MYC4 are targets of JAZ repressors and act additively with MYC2 in the activation of jasmonate responses. DOI: 10.1105/tpc.110.080788 ; PMID: 21335373
- Characterization of JAZ-interacting bHLH transcription factors that regulate jasmonate responses in Arabidopsis. DOI: 10.1093/jxb/erq408 ; PMID: 21321051
- Analysis of IIId, IIIe and IVa group basic-helix-loop-helix proteins expressed in Arabidopsis root epidermis. DOI: 10.1016/j.plantsci.2011.07.006 ; PMID: 21889054
- The Arabidopsis JAZ2 promoter contains a G-Box and thymidine-rich module that are necessary and sufficient for jasmonate-dependent activation by MYC transcription factors and repression by JAZ proteins. DOI: 10.1093/pcp/pcr178 ; PMID: 22173100
- MYC2: the master in action. DOI: 10.1093/mp/sss128 ; PMID: 23142764
- Negative feedback control of jasmonate signaling by an alternative splice variant of JAZ10. DOI: 10.1104/pp.113.218164 ; PMID: 23632853
- Arabidopsis basic helix-loop-helix transcription factors MYC2, MYC3, and MYC4 regulate glucosinolate biosynthesis, insect performance, and feeding behavior. DOI: 10.1105/tpc.113.115139 ; PMID: 23943862
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Repression of Jasmonate-Dependent Defenses by Shade Involves Differential Regulation of Protein Stability of MYC Transcription Factors and Their JAZ Repressors in Arabidopsis. DOI: 10.1105/tpc.114.125047 ; PMID: 24824488
- Male sterility in Arabidopsis induced by overexpression of a MYC5-SRDX chimeric repressor. DOI: 10.1111/tpj.12776 ; PMID: 25627909
- Change of a conserved amino acid in the MYC2 and MYC3 transcription factors leads to release of JAZ repression and increased activity. DOI: 10.1111/nph.13398 ; PMID: 25817565
- Regulation of Jasmonate-Mediated Stamen Development and Seed Production by a bHLH-MYB Complex in Arabidopsis. DOI: 10.1105/tpc.15.00116 ; PMID: 26002869
- Regulation of Jasmonate-Induced Leaf Senescence by Antagonism between bHLH Subgroup IIIe and IIId Factors in Arabidopsis. DOI: 10.1105/tpc.15.00110 ; PMID: 26071420
- Multilayered Organization of Jasmonate Signalling in the Regulation of Root Growth. DOI: 10.1371/journal.pgen.1005300 ; PMID: 26070206
- The RING E3 Ligase KEEP ON GOING Modulates JASMONATE ZIM-DOMAIN12 Stability. DOI: 10.1104/pp.15.00479 ; PMID: 26320228
- Novel JAZ co-operativity and unexpected JA dynamics underpin Arabidopsis defence responses to Pseudomonas syringae infection. DOI: 10.1111/nph.13683 ; PMID: 26428397
- JAZ7 negatively regulates dark-induced leaf senescence in Arabidopsis. DOI: 10.1093/jxb/erv487 ; PMID: 26547795
- New perspective of the bHLH-MYB complex in jasmonate-regulated plant fertility in arabidopsis. DOI: 10.1080/15592324.2015.1135280 ; PMID: 26829586
- Characterization of a JAZ7 activation-tagged Arabidopsis mutant with increased susceptibility to the fungal pathogen Fusarium oxysporum. DOI: 10.1093/jxb/erw040 ; PMID: 26896849
- Arabidopsis MYC Transcription Factors Are the Target of Hormonal Salicylic Acid/Jasmonic Acid Cross Talk in Response to Pieris brassicae Egg Extract. DOI: 10.1104/pp.16.00031 ; PMID: 26884488
- MYC2, MYC3, and MYC4 function redundantly in seed storage protein accumulation in Arabidopsis. DOI: 10.1016/j.plaphy.2016.07.004 ; PMID: 27415132
- JAZ2 controls stomata dynamics during bacterial invasion. DOI: 10.1111/nph.14354 ; PMID: 28005270
- Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. DOI: 10.1016/j.celrep.2017.04.057 ; PMID: 28514654
- The bHLH Transcription Factors MYC2, MYC3, and MYC4 Are Required for Jasmonate-Mediated Inhibition of Flowering in Arabidopsis. DOI: 10.1016/j.molp.2017.08.007 ; PMID: 28827172
- MYC5 is Involved in Jasmonate-Regulated Plant Growth, Leaf Senescence and Defense Responses. DOI: 10.1093/pcp/pcx112 ; PMID: 29017003
- Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. DOI: 10.1105/tpc.17.00805 ; PMID: 29317470
- Jasmonate Negatively Regulates Stomatal Development in Arabidopsis Cotyledons. DOI: 10.1104/pp.17.00444 ; PMID: 29496884
- Blue Light Regulates Secondary Cell Wall Thickening via MYC2/MYC4 Activation of the NST1-Directed Transcriptional Network in Arabidopsis. DOI: 10.1105/tpc.18.00315 ; PMID: 30242037
- Extracellular ATP Shapes a Defense-Related Transcriptome Both Independently and along with Other Defense Signaling Pathways. DOI: 10.1104/pp.18.01301 ; PMID: 30630869
- Regulation Mechanism of MYC Family Transcription Factors in Jasmonic Acid Signalling Pathway on Taxol Biosynthesis. DOI: 10.3390/ijms20081843 ; PMID: 31013972
- NAI2 and TSA1 Drive Differentiation of Constitutive and Inducible ER Body Formation in Brassicaceae. DOI: 10.1093/pcp/pcz236 ; PMID: 31879762
- MYC2, MYC3, and MYC4 function additively in wounding-induced jasmonic acid biosynthesis and catabolism. DOI: 10.1111/jipb.12902 ; PMID: 31876387
- Light promotes jasmonate biosynthesis to regulate photomorphogenesis in Arabidopsis. DOI: 10.1007/s11427-019-1584-4 ; PMID: 31974860
- MYCs and PIFs Act Independently in Arabidopsis Growth Regulation. DOI: 10.1534/g3.120.401188 ; PMID: 32220954
- Ring/U-Box Protein AtUSR1 Functions in Promoting Leaf Senescence Through JA Signaling Pathway in Arabidopsis. DOI: 10.3389/fpls.2020.608589 ; PMID: 33391323
- Abscisic acid-mediated induction of FLAVIN-CONTAINING MONOOXYGENASE 2 leads to reduced accumulation of methylthioalkyl glucosinolates in Arabidopsis thaliana. DOI: 10.1016/j.plantsci.2020.110764 ; PMID: 33487349
- Differential Contributions of MYCs to Insect Defense Reveals Flavonoids Alleviating Growth Inhibition Caused by Wounding in Arabidopsis. DOI: 10.3389/fpls.2021.700555 ; PMID: 34326858
- Effects of BrMYC2/3/4 on Plant Development, Glucosinolate Metabolism, and Sclerotinia sclerotiorum Resistance in Transgenic Arabidopsis thaliana. DOI: 10.3389/fpls.2021.707054 ; PMID: 34539701
- Jasmonic Acid-Dependent MYC Transcription Factors Bind to a Tandem G-Box Motif in the YUCCA8 and YUCCA9 Promoters to Regulate Biotic Stress Responses. DOI: 10.3390/ijms22189768 ; PMID: 34575927
- Multiple indole glucosinolates and myrosinases defend Arabidopsis against Tetranychus urticae herbivory. DOI: 10.1093/plphys/kiab247 ; PMID: 34618148
- A Phytochrome B-PIF4-MYC2/MYC4 module inhibits secondary cell wall thickening in response to shaded light. DOI: 10.1016/j.xplc.2022.100416 ; PMID: 35927944
- Long-lasting memory of jasmonic acid-dependent immunity requires DNA demethylation and ARGONAUTE1. DOI: 10.1038/s41477-022-01313-9 ; PMID: 36604579
- PHOSPHATE STARVATION RESPONSE1 (PHR1) interacts with JASMONATE ZIM-DOMAIN (JAZ) and MYC2 to modulate phosphate deficiency-induced jasmonate signaling in Arabidopsis. DOI: 10.1093/plcell/koad057 ; PMID: 36856677
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
Gene Resources
Sequences
cDNA Sequence
- >AT4G17880.1
AAATAACTCAATCAATAATTCATATTTGGTGAAAATAAAAGTACTATTTCTTTTTCTTTAGAGTTAAAAAAAAAAAATGAATATAAACAGATTCCTTTTCCCGAAACAATCAAACCAAACACAAATATTTTGCTTAAAGAACTTACTTCTCTCCTCTGTCTCTCACCGGAAAAACAAAAAGTCTTCTCTTTTATAACTACGTCAGAGAACTGTTATGTCTCCGACGAATGTTCAAGTAACCGATTACCATCTCAACCAATCAAAAACGGATACAACAAATCTCTGGTCAACCGACGACGATGCATCGGTAATGGAAGCTTTCATCGGCGGCGGCTCCGATCATTCTTCTCTTTTTCCTCCACTTCCTCCTCCTCCTCTTCCTCAAGTCAACGAAGATAATCTCCAGCAACGTCTCCAAGCTTTAATCGAAGGAGCAAACGAGAACTGGACTTACGCCGTGTTCTGGCAATCATCTCACGGTTTCGCCGGAGAAGACAACAACAACAACAACACAGTGTTGTTAGGTTGGGGAGATGGTTATTACAAAGGAGAAGAAGAGAAGTCTAGAAAGAAGAAATCAAATCCAGCTAGTGCAGCTGAACAAGAGCATCGTAAGAGAGTGATTAGAGAGCTCAACTCTTTAATCTCCGGTGGTGTAGGAGGAGGAGATGAAGCTGGAGATGAAGAAGTTACAGATACTGAATGGTTCTTCTTAGTTTCAATGACACAGAGCTTTGTCAAGGGTACTGGTTTACCTGGTCAAGCTTTCTCAAATTCAGACACGATTTGGTTATCTGGTTCTAATGCTTTAGCTGGATCAAGTTGTGAGAGAGCTCGTCAAGGTCAGATTTATGGGTTACAAACAATGGTGTGTGTAGCGACAGAGAATGGTGTCGTTGAGCTTGGTTCGTCGGAGATTATTCATCAAAGTTCAGATCTTGTTGATAAAGTTGACACCTTTTTCAATTTTAACAATGGTGGTGGTGAATTTGGTTCTTGGGCGTTTAATTTGAATCCAGATCAAGGAGAGAATGATCCAGGTTTGTGGATTAGTGAACCTAATGGTGTTGACTCTGGTCTTGTAGCTGCTCCGGTGATGAATAATGGTGGAAATGACTCAACTTCTAATTCTGATTCTCAACCAATTTCTAAGCTTTGTAATGGAAGCTCTGTTGAAAACCCTAACCCTAAAGTTCTGAAATCTTGTGAAATGGTGAATTTCAAGAATGGGATTGAGAATGGTCAAGAAGAAGATAGTAGTAATAAGAAGAGATCACCGGTTTCGAATAATGAAGAAGGGATGCTTTCTTTTACCTCTGTTCTTCCATGTGACTCGAATCACTCTGATCTTGAAGCTTCAGTGGCTAAAGAAGCTGAGAGTAACAGAGTTGTGGTTGAACCGGAGAAGAAACCGAGGAAACGAGGGAGAAAACCGGCGAATGGAAGAGAAGAGCCTTTGAATCATGTAGAGGCAGAGAGACAGAGAAGAGAGAAGTTGAATCAGAGATTCTATTCTTTAAGAGCTGTGGTTCCTAATGTGTCTAAGATGGATAAAGCTTCTCTATTAGGAGATGCTATTTCGTATATCAGTGAGCTTAAGTCTAAGTTGCAAAAGGCTGAATCTGATAAAGAAGAGTTGCAGAAGCAGATTGATGTGATGAATAAAGAAGCGGGAAATGCGAAAAGTTCGGTAAAAGATCGAAAATGTTTGAATCAAGAATCGAGTGTGTTGATAGAGATGGAGGTTGATGTGAAGATTATTGGTTGGGATGCAATGATAAGGATTCAATGTAGTAAGAGGAATCATCCTGGTGCTAAGTTCATGGAAGCACTTAAGGAGTTGGATTTGGAAGTGAATCATGCGAGTTTATCGGTAGTGAATGATCTTATGATCCAACAAGCGACTGTGAAAATGGGGAATCAGTTTTTCACGCAAGATCAACTCAAGGTTGCTCTAACGGAGAAAGTTGGAGAATGTCCATGAATTGAAGTCAGCATCTTTAGGGCTAATACACCGGAGAATACTGCGAAAAGTCGAAAACAACGATCATAGTATAAGCCGCGGTAAAAAGTGTTAAACCTTTCACACAAGTTTCTCTAGTGAATGTAGTTGTAAACTCTATTGTGTAAGGGTAATTTTGTAGTACCCACTTGTTGCTATTGAATGCTTGTTAGAGAGGATTCTTAGTGTAGTATATGATTAGGTTGGGGTTTGTTGTTTCATGAGATAAATAAATGTGTTTGATCAATGGTTAAGTCTTTGGTTTGTTGGTGTATGTATGTAAATAAGGCTTTTGTTAGAAATAAGACAAATGGGACTGAAGTTGGAGTTTTTTGTTGTCTTTTGAGTTAAAGTTTGA
CDS Sequence
Protein Sequence