Information report for AT4G17730
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005829 — located in — cytosol
- GO:0061025 — acts upstream of or within — membrane fusion
- GO:0000325 — located in — plant-type vacuole
- GO:0031201 — part of — SNARE complex
- GO:0048278 — involved in — vesicle docking
- GO:0006906 — involved in — vesicle fusion
- GO:0006886 — involved in — intracellular protein transport
- GO:0009597 — acts upstream of or within — detection of virus
- GO:0005634 — located in — nucleus
- GO:0016192 — involved in — vesicle-mediated transport
- GO:0006886 — acts upstream of or within — intracellular protein transport
- GO:0005484 — enables — SNAP receptor activity
- GO:0000149 — enables — SNARE binding
- GO:0012505 — is active in — endomembrane system
- GO:0016020 — located in — membrane
Functional Keywords
Literature and News
- The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. DOI: 10.1104/pp.124.4.1558 ; PMID: 11115874
- Syntenic relationships between Medicago truncatula and Arabidopsis reveal extensive divergence of genome organization. DOI: 10.1104/pp.102.016436 ; PMID: 12644654
- Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana. DOI: 10.1089/152308603321223513 ; PMID: 12626114
- Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells. DOI: 10.1247/csf.29.49 ; PMID: 15342965
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- SNAREs Regulate Vesicle Trafficking During Root Growth and Development. DOI: 10.3389/fpls.2022.853251 ; PMID: 35360325
- The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors. DOI: 10.1104/pp.124.4.1558 ; PMID: 11115874
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Gene Resources
- UniProt: A8MS65
- EMBL: AK316791, CP002687
- AlphaFoldDB: A8MS65
- EnsemblPlants: AT4G17730.2
- Gramene: AT4G17730.2
- Orthologous matrix: AGIIVWK
- ExpressionAtlas: AT4G17730
- InterPro: IPR000727, IPR006011, IPR006012
- PANTHER: PTHR19957, PTHR19957:SF398
- SUPFAM: SSF47661
- PROSITE: PS00914, PS50192
- Gene3D: 1.20.5.110, 1.20.58.70
- SWISS-MODEL: A8MS65
- Conserved Domain Database: cd00179, cd15840
Sequences
cDNA Sequence
- >AT4G17730.2
TTTTTCCGTTCATACAGGTAATGTGACATTTCACGTTTTGCTCAATCTCTCTCTCCGCGGTTCACGTTTTTTCTCAATCTGTCCGGAGAGAGAGAAACTCACCGGGGAATCTTGAAATCACCATCACATCCTCTCTTCCCTCGATCTCCGTTATCGACTGTAAATCGAATTTTGTTGTTGCTTTGTTTTCTTGGGCGAATAAAAGAGGATAATTTAGTGGCGGGGTTTTCGAGAAAGAGAGAGAAAGAATGAGTTTTCAAGATTTAGAGGCGGGAAGAGGAAGATCATTAGCTTCTTCAAGGAACATCAATGGTGGTGGTAGTAGACAAGACACGACTCAAGATGTTGCTTCTGGTATATTTCAGATCAATACAAGTGTTTCCACTTTCCATCGTCTTGTCAATACTCTTGGTACTCCTAAAGATACGCCTGAGCTCAGAGAGAAGCTGCATAAGACAAGATTATATATTGGACAGTTAGTGAAAGATACATCAGCTAAACTTAAAGAAGCTAGTGAAACTGATCATCAAAGAGGTGTAAATCAAAAGAAGAAGATTGTGGATGCTAAGCTTGCAAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAAAAGGCTCAGCGTCTTGCTGCTGAAAGAGAAACCGTATATGCTCCTCTTGTCCACAAGCCATCTCTTCCCTCAAGCTACACATCCAGTGAGATAGATGTGAATGGAGATAAGCATCCAGAGCAGCGTGCCCTTCTTGTGGAATCAAAAAGACAAGAACTTGTACTGTTGGACAATGAGATTGCGTTCAATGAGGCTGTTATTGAGGAAAGAGAGCAAGGGATACAAGAAATTCAGCAGCAAATTGGCGAGGTGCACGAGATCTTCAAAGACTTGGCAGTGTTGGTGCACGATCAAGGAAACATGATAGATGATATTGGTACTCACATCGATAACTCTTACGCTGCAACTGCCCAAGGAAAATCCCATCTCGTAAGGCATCAAAGACACAAAGATCAAATTCTTCTCTGTTTGATTTCCCCAAGCTCATAAAAGCATGGACAAGTGCTTCATCATCAATCAAGAAGCATCAATGAGTATATGTTTGTCACGACTCTCTTTGTTCCTACAATTTAGTCTGTTGGACTATTGGTCTCTTGTTTCTTGTTATCGAGTATATAGAGTAGTTCACTTTGGTTTGATTTGGCTTGTGTTTGCTGAGTCTTGGTTCTGAAGGAGAGAGTGTTACTGCTTTGTCTCTGTAATATAACTTGGTTCTGAAGGAAAATCCTCTGTTTGTGTTCTTAAATGTGAAATTTCTGGTTTCGATTAGCTAAAGCTATGGCGAATCTTCAAAA - >AT4G17730.1
TTTTTCCGTTCATACAGGTAATGTGACATTTCACGTTTTGCTCAATCTCTCTCTCCGCGGTTCACGTTTTTTCTCAATCTGTCCGGAGAGAGAGAAACTCACCGGGGAATCTTGAAATCACCATCACATCCTCTCTTCCCTCGATCTCCGTTATCGACTGTAAATCGAATTTTGTTGTTGCTTTGTTTTCTTGGGCGAATAAAAGAGGATAATTTAGTGGCGGGGTTTTCGAGAAAGAGAGAGAAAGAATGAGTTTTCAAGATTTAGAGGCGGGAAGAGGAAGATCATTAGCTTCTTCAAGGAACATCAATGGTGGTGGTAGTAGACAAGACACGACTCAAGATGTTGCTTCTGGTATATTTCAGATCAATACAAGTGTTTCCACTTTCCATCGTCTTGTCAATACTCTTGGTACTCCTAAAGATACGCCTGAGCTCAGAGAGAAGCTGCATAAGACAAGATTATATATTGGACAGTTAGTGAAAGATACATCAGCTAAACTTAAAGAAGCTAGTGAAACTGATCATCAAAGAGGTGTAAATCAAAAGAAGAAGATTGTGGATGCTAAGCTTGCAAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAAAAGGCTCAGCGTCTTGCTGCTGAAAGAGAAACCGTATATGCTCCTCTTGTCCACAAGCCATCTCTTCCCTCAAGCTACACATCCAGTGAGATAGATGTGAATGGAGATAAGCATCCAGAGCAGCGTGCCCTTCTTGTGGAATCAAAAAGACAAGAACTTGTACTGTTGGACAATGAGATTGCGTTCAATGAGGCTGTTATTGAGGAAAGAGAGCAAGGGATACAAGAAATTCAGCAGCAAATTGGCGAGGTGCACGAGATCTTCAAAGACTTGGCAGTGTTGGTGCACGATCAAGGAAACATGATAGATGATATTGGTACTCACATCGATAACTCTTACGCTGCAACTGCCCAAGGAAAATCCCATCTCGTAAGGCATCAAAGACACAAAGATCAAATTCTTCTCTGTTTGATTTCCCCAAGCTCATAAAAGCATGGACAAGTGCTTCATCATCAATCAAGAAGCATCAATGAGTATATGTTTGTCACGACTCTCTTTGTTCCTACAATTTAGTCTGTTGGACTATTGGTCTCTTGTTTCTTGTTATCGAGTATATAGAGTAGTTCACTTTGGTTTGATTTGGCTTGTGTTTGCTGAGTCTTGGTTCTGAAGGAGAGAGTGTTACTGCTTTGTCTCTGTAATATAACTTGGTTCTGAAGGAAAATCCTCTGTTTGTGTTCTTAAATGTGAAATTTCTGGTTTCGATTAGCTAAAGCTATGGCGAATCTTCAAAA
CDS Sequence
Protein Sequence