Information report for AT4G17600
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0009535 — located in — chloroplast thylakoid membrane
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0019899 — enables — enzyme binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0009503 — part of — thylakoid light-harvesting complex
- GO:0042651 — located in — thylakoid membrane
- GO:0009507 — located in — chloroplast
- GO:0005829 — located in — cytosol
- GO:1902326 — acts upstream of or within — positive regulation of chlorophyll biosynthetic process
- GO:1904966 — acts upstream of or within — positive regulation of vitamin E biosynthetic process
- GO:1904964 — acts upstream of or within — positive regulation of phytol biosynthetic process
- GO:0009535 — is active in — chloroplast thylakoid membrane
- GO:0043495 — enables — protein-membrane adaptor activity
- GO:0042802 — enables — identical protein binding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A guide to the Lhc genes and their relatives in Arabidopsis/IT>. DOI: 10.1016/s1360-1385(99)01419-3 ; PMID: 10366881
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- PIF1 directly and indirectly regulates chlorophyll biosynthesis to optimize the greening process in Arabidopsis. DOI: 10.1073/pnas.0803611105 ; PMID: 18591656
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Functional analysis of light-harvesting-like protein 3 (LIL3) and its light-harvesting chlorophyll-binding motif in Arabidopsis. DOI: 10.1074/jbc.M113.525428 ; PMID: 24275650
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis. DOI: 10.3389/fpls.2016.00168 ; PMID: 26909098
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A5S9XTD6
- EMBL: CACSHJ010000095
- AlphaFoldDB: A0A5S9XTD6
- EnsemblPlants: AT4G17600.1
- Gramene: AT4G17600.1
- KEGG: ath:AT4G17600
- Orthologous matrix: QDARWIN
- ExpressionAtlas: AT4G17600
- PANTHER: PTHR14154
- SUPFAM: SSF103511
- Gene3D: 1.10.3460.10
- OrthoDB: A0A5S9XTD6
Sequences
cDNA Sequence
- >AT4G17600.1
AAAAAAAACACGTTACGTAGTCTCAATTTGGGAGAAAGAAACGACATACATGTTACATCTTTAAACGATAACAAGTCTATTTAGAACCACTAGTTGTGATTTGTGAAACTCTGAAGTAAAGAAGAAACCACAACAATGGCGTTGTTCTCCCCGCCAATCTCTTCTTCATCTCTTCAAAATCCCAATTTCATTCCCAAATTTTCATTCTCCCTCCTCTCCAGTAACCGCTTCTCTCTCCTCTCCGTCACTCGAGCTTCCTCCGACAGTGGATCAACCTCTCCCACCGCCGCCGTCTCCGTGGAGGCTCCTGAGCCCGTGGAAGTGATAGTTAAAGAGCCTCCGCAATCAACACCGGCGGTTAAAAAGGAAGAAACCGCCACCGCTAAAAATGTCGCCGTCGAAGGTGAAGAGATGAAAACAACGGAGAGTGTTGTCAAATTCCAGGATGCGAGATGGATTAATGGAACTTGGGATCTGAAACAGTTCGAGAAAGATGGAAAAACCGATTGGGATTCTGTAATCGTTGCTGAGGCAAAGAGAAGAAAATGGCTAGAAGAGAATCCAGAAACAACGAGTAACGACGAACCAGTGCTTTTCGATACATCGATTATTCCATGGTGGGCTTGGATTAAGAGATACCACTTACCTGAAGCTGAACTCTTAAATGGTCGTGCGGCGATGATAGGATTCTTTATGGCTTACTTTGTCGATAGTCTTACCGGAGTAGGACTTGTTGATCAAATGGGGAATTTCTTCTGCAAGACACTATTGTTTGTGGCTGTGGCTGGAGTTTTGTTTATTCGTAAGAATGAGGATGTGGATAAACTCAAGAACTTGTTTGATGAGACTACATTGTATGATAAGCAATGGCAAGCAGCTTGGAAAAATGATGATGATGAGTCATTGGGTTCTAAGAAGAAGTGATAACAAAGATTCTTGCTTTCTTTTTTTGTTGTTGTTGTAATTAGGAGATGAACTTACCAAATGTAATATCAAGAGATTTGAACAATGTTTCCTCAGATTACCGTTAATCATGTCTAGTCTCTACTTAACTTAATCTAATTAGAAAACAAAAAAGGCCCAATAAGAAGCCCAATTTTCCAAGTTTATTTTCGTTAGTTATATTTATCCCACATCGACAACAGCTCGTAAGTGAGATAAATGTTTTACCAAGAATCTTTGGCTTTGGCTACCACGATATTGGCTCTGGCCACAATTTCTCATTGTTTACCAGGTTGCTTGACCGATACGGGTTTAGGAAACTTGACTCTGAGCAAAGGGAATTTGCTGATGGTGACTTTGTGAGAGGTAAACCTGAGCTTATCCGGAACATATATAAACGCACCAGAGCTCAAATACTAAACACTAAAGAAGGGAGAGAGCTGCTTAAGCAAGTCATGGAGATGAGGAAACAGAGGAGAGAAAAGATGAAGAAAGAGATTACGAAAGCAAAGGAACTAGCTGATCGGTTGCACCATGTACATATTTGGAACATACAATGATGTTTCGCGATTTGGAAATTTATGTCAAGACCAGGCTTTGATTACTCTGCTTATAGTTCTCCTATTTGATATATTTCCCTTTCCAGGGTTAGGTTTTTGATTGTATGTGCAACTTATT
CDS Sequence
Protein Sequence