Information report for AT4G17520
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0080090 — acts upstream of or within — regulation of primary metabolic process
- GO:0005829 — located in — cytosol
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005777 — located in — peroxisome
- GO:0003729 — enables — mRNA binding
- GO:0005634 — located in — nucleus
- GO:0051171 — acts upstream of or within — regulation of nitrogen compound metabolic process
- GO:0005737 — is active in — cytoplasm
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0005634 — is active in — nucleus
Functional Keywords
Literature and News
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying and up-regulation. DOI: 10.1093/jxb/ert227 ; PMID: 24064926
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Mediator of tolerance to abiotic stress ERF6 regulates susceptibility of Arabidopsis to Meloidogyne incognita. DOI: 10.1111/mpp.12745 ; PMID: 30160354
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A654FQC9
- EMBL: CACRSJ010000109
- AlphaFoldDB: A0A654FQC9
- EnsemblPlants: AT4G17520.1
- Gramene: AT4G17520.1
- KEGG: ath:AT4G17520
- Orthologous matrix: GPRNENG
- ExpressionAtlas: AT4G17520
- InterPro: IPR006861, IPR019084, IPR039764
- PANTHER: PTHR12299, PTHR12299:SF50
- Gene3D: 6.10.140.1040
Sequences
cDNA Sequence
- >AT4G17520.1
TATTATCTTCTTCTCTCTCTAACCCTCAGTTCTGTTAAGTACTTGGCTTCTAACAAACGCTGTCTGAATCATATTTCGATTCTGATTTTTCTTCATGGATTCGTATAGCCAATAAGTTTTTTCAATATTCAAAACAAAAACCCCATCAAAATAATCTCCGGACCAGTTTCTCTTTCGATTCAGTCGGACCGGAAAAACAATGGCGTCTGTGAACCCTTTCGATCTCTTGGACGATGACGCAGAGGATCCCAGCCAGATTGTTGCGTCTAAGCCATTGAAGGTTGTGGCTCCGGTTCAGACTGCTAAGTCTGGTAAGATGCCGACTAAGCCGCCTCCTCCTTCTCAAGCTGTGAGGGAGGCAAGGAACGCTCCTGGTGGAGGTCGTGGTGCTGGACGTGGAGGGAGTTATGGTCGTGGTGGACGTGGTGGAAACAATAGGGATTCAAGGAACAATGATGGTCCTGCCAATGAAAACGGATATGGTGGAGGCTACAGACGCTCAGAAGAAGGAGATGGAGCTAGACGTGGTGGGCCTGTTGGTGGATACCGTGGTGATCGCCGTGGAAGCTACAGCAATGGTGGTGATTCAGGTGACTCTGAAAGACCACGCAAGAACTATGACCGTCACAGTAGAACAGCGTACGGGAATGAGGATAAACGTGATGGAGCTGGCCGTGCGAATTGGGGAACCACTCAGGATGATATTACTCCGGTGACTGAAGAATCCACAGCTGTTGTGGACAAGAATTTGACTGTTGAGAAGCAAGATGGTGAAGGTGAAGCAACTGATGCAAAGAATGAAACACCTGCTGAGAAAGCAGAGGAAAAGCCTGAGGACAAGGAGATGACTTTGGAAGAGTATGAGAAGGTTTTGGAGGAGAAGAAGAAAGCTCTGCAGGCGACCAAGGTTGAGGAAAGGAAGGTTGACACTAAAGCATTTGAGGCCATGCAACAGCTCTCAAGCAAAAAGAGCAACAACGATGAAGTCTTCATCAAACTGGGAACAGAGAAGGACAAGCGCATTACTGAGAGAGAAGAGAAGACAAGGAAGTCATTGAGCATCAATGAGTTTCTGAAACCTGCGGATGGAAAGAGTTACTACAGACCAAGAGGTGGTTACCAAGGTGGAAGGGAAGGACGTGGACCAAGAGAAGGAAACCAGAGGGACGGTGGAAGAAACCTGAGGGAAGGAGGGAGAAACCAGAGGGACGGAGGAGCTGCAGCACAGGCACCAACACCGGCCATTGGGGACAGTGCACAGTTCCCTACTTTGGGTAAGTAAGGCAATCTCTCCGGTTTGGTCCTTCAGCTTCTGTCTGGACTCGTTTCTCTGTAATATCTCACTCGGTTTGGATTTTGTTCTTCTGATTCTATTTTTATTGTTATACTCTTCCCTTTAGAGAGCTGAAGGTTTTTTGTTTTGCGAACCCAATTTTGGGAGTTTTAAGTTAAATGAGGCCAAAAAATCAACCATTCTCCTTTTGTTGTTTAGGTTTCAATTATATTTAGGTGGGACTTTTTACTAAAGAAGTTTATTAATAATCCAAGTACCATTACAAAG
CDS Sequence
Protein Sequence