Information report for AT4G17340
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0000325 — located in — plant-type vacuole
- GO:0009705 — located in — plant-type vacuole membrane
- GO:0009705 — is active in — plant-type vacuole membrane
- GO:0055085 — involved in — transmembrane transport
- GO:0042807 — located in — central vacuole
- GO:0006833 — involved in — water transport
- GO:0015250 — enables — water channel activity
Literature and News
- The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants. DOI: 10.1104/pp.126.4.1358 ; PMID: 11500536
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Automated identification of putative methyltransferases from genomic open reading frames. DOI: 10.1074/mcp.M300037-MCP200 ; PMID: 12872006
- SAGE analysis of transcriptome responses in Arabidopsis roots exposed to 2,4,6-trinitrotoluene. DOI: 10.1104/pp.103.028019 ; PMID: 14551330
- The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence. DOI: 10.1104/pp.103.030536 ; PMID: 14730065
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Transcript profiling in the chl1-5 mutant of Arabidopsis reveals a role of the nitrate transporter NRT1.1 in the regulation of another nitrate transporter, NRT2.1. DOI: 10.1105/tpc.104.024380 ; PMID: 15319483
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- The maize root transcriptome by serial analysis of gene expression. DOI: 10.1104/pp.104.057638 ; PMID: 15965024
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Early effects of salinity on water transport in Arabidopsis roots. Molecular and cellular features of aquaporin expression. DOI: 10.1104/pp.105.065029 ; PMID: 16183846
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Host origin of plastid solute transporters in the first photosynthetic eukaryotes. DOI: 10.1186/gb-2007-8-10-r212 ; PMID: 17919328
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- In vivo imaging of the tonoplast intrinsic protein family in Arabidopsis roots. DOI: 10.1186/1471-2229-9-133 ; PMID: 19922653
- Mapping of tonoplast intrinsic proteins in maturing and germinating Arabidopsis seeds reveals dual localization of embryonic TIPs to the tonoplast and plasma membrane. DOI: 10.1093/mp/ssq051 ; PMID: 20833734
- Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA. DOI: 10.1104/pp.110.167718 ; PMID: 21245191
- TRANSLUCENT GREEN, an ERF family transcription factor, controls water balance in Arabidopsis by activating the expression of aquaporin genes. DOI: 10.1093/mp/sst152 ; PMID: 24177687
- Accumulation of TIP2;2 Aquaporin during Dark Adaptation Is Partially PhyA Dependent in Roots of Arabidopsis Seedlings. DOI: 10.3390/plants3010177 ; PMID: 27135499
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Early effects of salinity on water transport in Arabidopsis roots. Molecular and cellular features of aquaporin expression. DOI: 10.1104/pp.105.065029 ; PMID: 16183846
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Gene Resources
- UniProt: A0A178UVY8
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A178UVY8
- EnsemblPlants: AT4G17340.1
- Gramene: AT4G17340.1
- KEGG: ath:AT4G17340
- Orthologous matrix: HINPAMS
- ExpressionAtlas: AT4G17340
- InterPro: IPR000425, IPR022357, IPR023271
- PANTHER: PTHR45665, PTHR45665:SF37
- SUPFAM: SSF81338
- PROSITE: PS00221
- Gene3D: 1.20.1080.10
- OrthoDB: A0A178UVY8
- SWISS-MODEL: A0A178UVY8
- Conserved Domain Database: cd00333
Sequences
cDNA Sequence
- >AT4G17340.1
CGACCATCTATCATAATTGGTGTGAGACAACATTAGTTTAAATGCAGGATATTAACATGACAACAGAACACTCTTATCTTCACATATTATGAAATACCTTATCCATCATTTTCATAGCATTATACCAATTGGTTGTCTTTAATCATCTTCGATGTCACTAACCCTCAAAATTCAAAAGAAAATGAATAGTCTAAATAATTGGCGGTTTGGGCGGCATCCAATTGTGACAGGCCACGTAGAGTGGGACCAACAACTTCATTACCTCGTTTGGCTCTTTGCTATATATAAAGTCAAGCATTAGTATGCCCAAAACCACACAAATAGAAATAACTTGTAATCAACCAAAGTCGAAAAACAGAGTTATTTTGTCGGATCAAAATGGTGAAGATTGAGATAGGAAGTGTGGGTGACTCCTTTAGTGTAGCATCTCTTAAGGCTTACTTGTCTGAATTTATCGCAACTCTTCTCTTTGTGTTTGCTGGCGTTGGCTCTGCTCTTGCTTTTGCCAAGCTCACATCCGATGCAGCCTTGGACCCCGCTGGTCTTGTCGCTGTCGCTGTGGCTCACGCCTTTGCCCTTTTCGTTGGTGTTTCCATAGCCGCCAACATCTCCGGCGGACACCTTAACCCCGCCGTGACACTCGGTCTCGCCGTCGGTGGCAACATCACAGTAATAACCGGTTTCTTTTACTGGATTGCTCAATGCCTTGGCTCCATCGTCGCGTGTCTCCTCCTCGTCTTCGTTACCAATGGCGAGAGCGTACCGACTCATGGAGTAGCGGCCGGTTTAGGAGCTATTGAAGGAGTAGTGATGGAGATTGTGGTGACCTTTGCTCTGGTCTACACAGTCTACGCCACAGCGGCTGATCCAAAGAAAGGTTCACTCGGGACCATTGCTCCAATTGCTATCGGTTTCATCGTTGGTGCCAACATCCTCGCAGCGGGTCCCTTTAGCGGTGGTTCCATGAACCCGGCCAGGTCATTTGGACCAGCTGTTGTCAGTGGTGACTTCTCTCAGATATGGATCTACTGGGTGGGTCCACTAGTCGGTGGTGCACTTGCTGGACTCATCTACGGAGACGTCTTCATCGGATCCTACGCTCCAGCTCCCACCACAGAAAGCTACCCTTGATCAATCCTATAGCGTTTTAATTTGCTTGGCTTGCTTTTTGTTGTATGAAAATGTTTGGTCCTCGTTTCTTCCAAAAATGAATGATTGAATGTGGAGAAAAAGATCAAAGTTGTACTTTGTGTTGGTTATAAATAAGAATTGTATATTTTCAAATTTTATATCTCTGCCTTGTACTTTCTTGCATGTGTTAATGGCTAAAAATAACCGGTTTTAACTGTCCAA
CDS Sequence
Protein Sequence