Information report for AT4G16620
Gene Details
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Functional Descriptions
- GO:0009888 — acts upstream of or within — tissue development
- GO:0005886 — is active in — plasma membrane
- GO:0009507 — located in — chloroplast
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0022857 — enables — transmembrane transporter activity
- GO:0005739 — located in — mitochondrion
Functional Keywords
Literature and News
- An auxin-inducible gene from loblolly pine (Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein. DOI: 10.1007/s00425-003-1175-4 ; PMID: 14722770
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Comparative analyses of the gene expression profiles of Arabidopsis intact plant and cultured cells. DOI: 10.1007/s10529-005-8456-x ; PMID: 16132859
Gene Resources
- UniProt: A0A1P8B939
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B939
- EnsemblPlants: AT4G16620.2, AT4G16620.4
- Gramene: AT4G16620.2, AT4G16620.4
- Orthologous matrix: FERFDWK
Sequences
cDNA Sequence
- >AT4G16620.2
CCAATGCAATGTAATGGACACATGTCTTTAAAAGCAAGAAGTGAAAGATAGAGAAAGTTTCAACTTCAAGCATTACACATTACCAAAAAGAGAGATCACAAACAAAGCATCTTTTCTATTTTCATTTATCAACAACAACAAAACCAAAAACTTAATTAGTGTTTCTCTGCTTTTTTAGTTCCCCCACAAAATCGAATCCTTCTGTTCGGTTACCAAATGGGTTCCAACTGATTTGTCCGTTATTATTCTTTTTATTTTCTTCGTGTTTTTTTTGTGTTGAAAAAATGATGAAGAGAGAGACGTTAATAGAAGCAGGAATAATCGGAGGATTGGCCGGAGCTCAGGTGATTTACGCCGGAAACTCGGAGCTACTGAGTCAGTTGCTGTCTCTCGGAATTGACCCACTTCTTATCGTTATCTTATGCACCTTTGCATCAGTTCTTCTCATCACCCCTCTCGCTTTTCTCCTTGAAAGGAAGCTTTGGCCTAGAAGTCTAAGTTTCAAGTTGAAGATAAAACTAGTTTTGGTTGCTCTTGCTGGAGAAGGAGAAGAATTAAAAATTCATAACAAGGGATTAATTAAGAGAGAAGTTGTGTTTGAAACAGAGTGACTCTGTTCCAGGGGTTATTCTTGGAAGGAATGAAACACACCTCTGCTTCAATGGCTACAGCTATGCCTAATCTCTGCCCTGCTTTCATTTTTGTCATTGCTTGGGCTGCTGGGATGGAGAAAGTGAAGCTAAGTTGTATGTATAGTAGAGTTAAGATGGGAGGGACAGTGTTGTGTGTGATGGGAGCTCTCATTATGAGCTTAATGCACAGTACTACCGCTACTTTAAGCTCGGTTAAGACTATACCTATTGTCCCTGACGAAGTCGTTGTGGACAAGGACAAGATCTTAGGTTGCCTCTATCTCCTCCTTGCCATTTGCGGCTTGTCCTCTAGTATTGTCCTTCAGGCATCCATACTAGCCGAGTTTCCGGCGCCTATATCAATGTTCTCGATGGTATCTTTGATGGGTGGGATCACCACAGTAGCTTTGCAGTATGCTCTTAAGGGAAGTATGGAAATGGGAAGTGCATCAGTAATCGGTCTCGGCCACCTTGTGGGATACGCAATACTGGGAGGGTTGGTGAGTGGAGGAGGGTTAAGCTTCAATGCATGGGTGATTAAGAGGAAAGGACCAGTGATTGTGTCTCTCTTTAGTCCAATTGCAACTGTGGTATGTGTTGTTGTCTCTGCTTTTACCATGGAAGAGAGTTTCAACCTAGGAAGCTTTGCGGGAATGGCGTTGATGTTCGGAGGACTCTACTTCGTTCTGTGGGCTAAAGGAAAAGAGGATTGTGAAGAAATAGATGAAATGAAACAAGATGATGAAGAAAGTTTGCTTAGAACAGAGTTTGATCTTCAGAAGCCTCTCTTGCTTTAGTTCAAAGTCTTTTTTTTTTCTTCTTCTTAATGTTCTTGTGAATTTAGTTTAGGTTTAAAGAAGTAAGACAATTTTACTTTACAGATAATTCGGTTAGATATACATGTAGTAGGCTGTAGACTACAGTATATGTTCGTGTGTGATACTAAAATAGTTGGATATAAAAAAAACATCACATACATACAGGGCGAAGAAAAAGGGCCTAAACGATGTTATGTAAAAAGTTGTTCAATGTGAAGGTATATTTATATATAAATAAAAATTACCGTTGAGTTAGAAGATGAAGATAAACCTACCTAATATGAGAATGCGAATGGAACTAAGCAAATACACGCCAAAGA - >AT4G16620.3
CCAATGCAATGTAATGGACACATGTCTTTAAAAGCAAGAAGTGAAAGATAGAGAAAGTTTCAACTTCAAGCATTACACATTACCAAAAAGAGAGATCACAAACAAAGCATCTTTTCTATTTTCATTTATCAACAACAACAAAACCAAAAACTTAATTAGTGTTTCTCTGCTTTTTTAGTTCCCCCACAAAATCGAATCCTTCTGTTCGGTTACCAAATGGGTTCCAACTGATTTGTCCGTTATTATTCTTTTTATTTTCTTCGTGTTTTTTTTGTGTTGAAAAAATGATGAAGAGAGAGACGTTAATAGAAGCAGGAATAATCGGAGGATTGGCCGGAGCTCAGGTGATTTACGCCGGAAACTCGGAGCTACTGAGTCAGTTGCTGTCTCTCGGAATTGACCCACTTCTTATCGTTATCTTATGCACCTTTGCATCAGTTCTTCTCATCACCCCTCTCGCTTTTCTCCTTGAAAGGAAGCTTTGGCCTAGAAGTCTAAGTTTCAAGTTGAAGATAAAACTAGTTTTGGTTGCTCTTGCTGGAGAAGGAGAAGAATTAAAAATTCATAACAAGGGATTAATTAAGAGAGAAGTTGTGTTTGAAACAGAGTGACTCTGTTCCAGGGGTTATTCTTGGAAGGAATGAAACACACCTCTGCTTCAATGGCTACAGCTATGCCTAATCTCTGCCCTGCTTTCATTTTTGTCATTGCTTGGGCTGCTGGGATGGAGAAAGTGAAGCTAAGTTGTATGTATAGTAGAGTTAAGATGGGAGGGACAGTGTTGTGTGTGATGGGAGCTCTCATTATGAGCTTAATGCACAGTACTACCGCTACTTTAAGCTCGGTTAAGACTATACCTATTGTCCCTGACGAAGTCGTTGTGGACAAGGACAAGATCTTAGGTTGCCTCTATCTCCTCCTTGCCATTTGCGGCTTGTCCTCTAGTATTGTCCTTCAGGCATCCATACTAGCCGAGTTTCCGGCGCCTATATCAATGTTCTCGATGGTATCTTTGATGGGTGGGATCACCACAGTAGCTTTGCAGTATGCTCTTAAGGGAAGTATGGAAATGGGAAGTGCATCAGTAATCGGTCTCGGCCACCTTGTGGGATACGCAATACTGGGAGGGTTGGTGAGTGGAGGAGGGTTAAGCTTCAATGCATGGGTGATTAAGAGGAAAGGACCAGTGATTGTGTCTCTCTTTAGTCCAATTGCAACTGTGGTATGTGTTGTTGTCTCTGCTTTTACCATGGAAGAGAGTTTCAACCTAGGAAGCTTTGCGGGAATGGCGTTGATGTTCGGAGGACTCTACTTCGTTCTGTGGGCTAAAGGAAAAGAGGATTGTGAAGAAATAGATGAAATGAAACAAGATGATGAAGAAAGTTTGCTTAGAACAGAGTTTGATCTTCAGAAGCCTCTCTTGCTTTAGTTCAAAGTCTTTTTTTTTTCTTCTTCTTAATGTTCTTGTGAATTTAGTTTAGGTTTAAAGAAGTAAGACAATTTTACTTTACAGATAATTCGGTTAGATATACATGTAGTAGGCTGTAGACTACAGTATATGTTCGTGTGTGATACTAAAATAGTTGGATATAAAAAAAACATCACATACATACAGGGCGAAGAAAAAGGGCCTAAACGATGTTATGTAAAAAGTTGTTCAATGTGAAGGTATATTTATATATAAATAAAAATTACCGTTGAGTTAGAAGATGAAGATAAACCTACCTAATATGAGAATGCGAATGGAACTAAGCAAATACACGCCAAAGA - >AT4G16620.4
CCAATGCAATGTAATGGACACATGTCTTTAAAAGCAAGAAGTGAAAGATAGAGAAAGTTTCAACTTCAAGCATTACACATTACCAAAAAGAGAGATCACAAACAAAGCATCTTTTCTATTTTCATTTATCAACAACAACAAAACCAAAAACTTAATTAGTGTTTCTCTGCTTTTTTAGTTCCCCCACAAAATCGAATCCTTCTGTTCGGTTACCAAATGGGTTCCAACTGATTTGTCCGTTATTATTCTTTTTATTTTCTTCGTGTTTTTTTTGTGTTGAAAAAATGATGAAGAGAGAGACGTTAATAGAAGCAGGAATAATCGGAGGATTGGCCGGAGCTCAGGTGATTTACGCCGGAAACTCGGAGCTACTGAGTCAGTTGCTGTCTCTCGGAATTGACCCACTTCTTATCGTTATCTTATGCACCTTTGCATCAGTTCTTCTCATCACCCCTCTCGCTTTTCTCCTTGAAAGGAAGCTTTGGCCTAGAAGTCTAAGTTTCAAGTTGAAGATAAAACTAGTTTTGGTTGCTCTTGCTGGAGAAGGAGAAGAATTAAAAATTCATAACAAGGGATTAATTAAGAGAGAAGTTGTGTTTGAAACAGAGTGACTCTGTTCCAGGGGTTATTCTTGGAAGGAATGAAACACACCTCTGCTTCAATGGCTACAGCTATGCCTAATCTCTGCCCTGCTTTCATTTTTGTCATTGCTTGGGCTGCTGGGATGGAGAAAGTGAAGCTAAGTTGTATGTATAGTAGAGTTAAGATGGGAGGGACAGTGTTGTGTGTGATGGGAGCTCTCATTATGAGCTTAATGCACAGTACTACCGCTACTTTAAGCTCGGTTAAGACTATACCTATTGTCCCTGACGAAGTCGTTGTGGACAAGGACAAGATCTTAGGTTGCCTCTATCTCCTCCTTGCCATTTGCGGCTTGTCCTCTAGTATTGTCCTTCAGGCATCCATACTAGCCGAGTTTCCGGCGCCTATATCAATGTTCTCGATGGTATCTTTGATGGGTGGGATCACCACAGTAGCTTTGCAGTATGCTCTTAAGGGAAGTATGGAAATGGGAAGTGCATCAGTAATCGGTCTCGGCCACCTTGTGGGATACGCAATACTGGGAGGGTTGGTGAGTGGAGGAGGGTTAAGCTTCAATGCATGGGTGATTAAGAGGAAAGGACCAGTGATTGTGTCTCTCTTTAGTCCAATTGCAACTGTGGTATGTGTTGTTGTCTCTGCTTTTACCATGGAAGAGAGTTTCAACCTAGGAAGCTTTGCGGGAATGGCGTTGATGTTCGGAGGACTCTACTTCGTTCTGTGGGCTAAAGGAAAAGAGGATTGTGAAGAAATAGATGAAATGAAACAAGATGATGAAGAAAGTTTGCTTAGAACAGAGTTTGATCTTCAGAAGCCTCTCTTGCTTTAGTTCAAAGTCTTTTTTTTTTCTTCTTCTTAATGTTCTTGTGAATTTAGTTTAGGTTTAAAGAAGTAAGACAATTTTACTTTACAGATAATTCGGTTAGATATACATGTAGTAGGCTGTAGACTACAGTATATGTTCGTGTGTGATACTAAAATAGTTGGATATAAAAAAAACATCACATACATACAGGGCGAAGAAAAAGGGCCTAAACGATGTTATGTAAAAAGTTGTTCAATGTGAAGGTATATTTATATATAAATAAAAATTACCGTTGAGTTAGAAGATGAAGATAAACCTACCTAATATGAGAATGCGAATGGAACTAAGCAAATACACGCCAAAGA - >AT4G16620.1
CCAATGCAATGTAATGGACACATGTCTTTAAAAGCAAGAAGTGAAAGATAGAGAAAGTTTCAACTTCAAGCATTACACATTACCAAAAAGAGAGATCACAAACAAAGCATCTTTTCTATTTTCATTTATCAACAACAACAAAACCAAAAACTTAATTAGTGTTTCTCTGCTTTTTTAGTTCCCCCACAAAATCGAATCCTTCTGTTCGGTTACCAAATGGGTTCCAACTGATTTGTCCGTTATTATTCTTTTTATTTTCTTCGTGTTTTTTTTGTGTTGAAAAAATGATGAAGAGAGAGACGTTAATAGAAGCAGGAATAATCGGAGGATTGGCCGGAGCTCAGGTGATTTACGCCGGAAACTCGGAGCTACTGAGTCAGTTGCTGTCTCTCGGAATTGACCCACTTCTTATCGTTATCTTATGCACCTTTGCATCAGTTCTTCTCATCACCCCTCTCGCTTTTCTCCTTGAAAGGAAGCTTTGGCCTAGAAGTCTAAGTTTCAAGTTGAAGATAAAACTAGTTTTGGTTGCTCTTGCTGGAGAAGGAGAAGAATTAAAAATTCATAACAAGGGATTAATTAAGAGAGAAGTTGTGTTTGAAACAGAGTGACTCTGTTCCAGGGGTTATTCTTGGAAGGAATGAAACACACCTCTGCTTCAATGGCTACAGCTATGCCTAATCTCTGCCCTGCTTTCATTTTTGTCATTGCTTGGGCTGCTGGGATGGAGAAAGTGAAGCTAAGTTGTATGTATAGTAGAGTTAAGATGGGAGGGACAGTGTTGTGTGTGATGGGAGCTCTCATTATGAGCTTAATGCACAGTACTACCGCTACTTTAAGCTCGGTTAAGACTATACCTATTGTCCCTGACGAAGTCGTTGTGGACAAGGACAAGATCTTAGGTTGCCTCTATCTCCTCCTTGCCATTTGCGGCTTGTCCTCTAGTATTGTCCTTCAGGCATCCATACTAGCCGAGTTTCCGGCGCCTATATCAATGTTCTCGATGGTATCTTTGATGGGTGGGATCACCACAGTAGCTTTGCAGTATGCTCTTAAGGGAAGTATGGAAATGGGAAGTGCATCAGTAATCGGTCTCGGCCACCTTGTGGGATACGCAATACTGGGAGGGTTGGTGAGTGGAGGAGGGTTAAGCTTCAATGCATGGGTGATTAAGAGGAAAGGACCAGTGATTGTGTCTCTCTTTAGTCCAATTGCAACTGTGGTATGTGTTGTTGTCTCTGCTTTTACCATGGAAGAGAGTTTCAACCTAGGAAGCTTTGCGGGAATGGCGTTGATGTTCGGAGGACTCTACTTCGTTCTGTGGGCTAAAGGAAAAGAGGATTGTGAAGAAATAGATGAAATGAAACAAGATGATGAAGAAAGTTTGCTTAGAACAGAGTTTGATCTTCAGAAGCCTCTCTTGCTTTAGTTCAAAGTCTTTTTTTTTTCTTCTTCTTAATGTTCTTGTGAATTTAGTTTAGGTTTAAAGAAGTAAGACAATTTTACTTTACAGATAATTCGGTTAGATATACATGTAGTAGGCTGTAGACTACAGTATATGTTCGTGTGTGATACTAAAATAGTTGGATATAAAAAAAACATCACATACATACAGGGCGAAGAAAAAGGGCCTAAACGATGTTATGTAAAAAGTTGTTCAATGTGAAGGTATATTTATATATAAATAAAAATTACCGTTGAGTTAGAAGATGAAGATAAACCTACCTAATATGAGAATGCGAATGGAACTAAGCAAATACACGCCAAAGA
CDS Sequence
Protein Sequence