Information report for AT4G16500
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009505 — located in — plant-type cell wall
- GO:0002213 — acts upstream of or within — defense response to insect
- GO:0070542 — acts upstream of or within — response to fatty acid
- GO:0009611 — acts upstream of or within — response to wounding
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0099503 — located in — secretory vesicle
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0014070 — acts upstream of or within — response to organic cyclic compound
- GO:0005576 — located in — extracellular region
- GO:0009408 — acts upstream of or within — response to heat
- GO:0009506 — located in — plasmodesma
- GO:0005773 — located in — vacuole
- GO:0000325 — located in — plant-type vacuole
- GO:0044281 — acts upstream of or within — small molecule metabolic process
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- AtCYS1, a cystatin from Arabidopsis thaliana, suppresses hypersensitive cell death. DOI: 10.1046/j.1432-1033.2003.03630.x ; PMID: 12787025
- Co-immunoprecipitation of Hsp101 with cytosolic Hsc70. DOI: 10.1016/j.plaphy.2004.10.006 ; PMID: 15763661
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- An in vivo expression system for the identification of cargo proteins of vacuolar sorting receptors in Arabidopsis culture cells. DOI: 10.1111/tpj.12257 ; PMID: 23738689
- DREB2C acts as a transcriptional activator of the thermo tolerance-related phytocystatin 4 (AtCYS4) gene. DOI: 10.1007/s11248-013-9735-2 ; PMID: 23868510
- Protease activity and phytocystatin expression in Arabidopsis thaliana upon Heterodera schachtii infection. DOI: 10.1016/j.plaphy.2016.10.021 ; PMID: 27816823
- Single-molecule enzymatic reaction dynamics and mechanisms of GPX3 and TRXh9 from Arabidopsis thaliana. DOI: 10.1016/j.saa.2020.118778 ; PMID: 32810779
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XTC9
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A5S9XTC9
- EnsemblPlants: AT4G16500.1, AT4G16500.2
- Gramene: AT4G16500.1, AT4G16500.2
- KEGG: ath:AT4G16500
- Orthologous matrix: EIAEYAX
- ExpressionAtlas: AT4G16500
- InterPro: IPR000010, IPR046350
- PANTHER: PTHR47364, PTHR47364:SF5
- SUPFAM: SSF54403
- Gene3D: 3.10.450.10
- OrthoDB: A0A5S9XTC9
- SWISS-MODEL: A0A5S9XTC9
- Conserved Domain Database: cd00042
Sequences
cDNA Sequence
- >AT4G16500.1
ATTATATTGGATACTGGATATTAATTTAGAGAGATTTAAATGCAATAACAAATCAATTTAACCACGGTTTGGGTTTTAACGGTTGTGGATTTTTCCACCCTAGGGAATAAAACAACGGGCCAACCAGTCAAACCAGGCTATTAAGAAGCAGGGAATGAACATTGAACATAGTTCTTGACTAAAGAGCAAAACCGACGTCGTACTACAAATACTGAGTTGCCGACGCAAATCTAGATTGGCCCAAATCAACATATATGGGCCCATTTAGTGCTCTGCTCCACTACGAGTACACGTGACGGGACAACCCTCGTTGACTCTTTAACATGTTGTACATTATCTTTCGCCACGTGGACTTATCCAGTTGTCAAATCTGACGGTGTAAAAAGACAATTCACTCGTCACCGCGTAACACACAATTGAGATCTCCGTAAATTTCTGGAACTATCAGCCCACATTCCAAAGCAAAACCAAATCTACAAGTCTTGTCTATATAATAAACACCAGAGACCATTAAACACACGAAAATTAAAAAAGGTTAAGGAAACGAAAATATGATGATGAAGTCGTTGATCTGTCTCTCTCTCATCCTCCTCCCACTTGTCTCCGTCGTGGAAGGTCTCGGTGGTGGTGGTGGTCTTGGTAGCCGGAAGCCGATCAAGAATGTATCTGATCCGGATGTTGTTGCGGTCGCCAAGTATGCCATCGAGGAACATAACAAGGAGTCGAAGGAGAAGTTGGTTTTCGTCAAGGTTGTGGAGGGAACGACGCAAGTGGTCTCCGGTACAAAGTACGATCTGAAAATTGCGGCGAAGGATGGTGGTGGTAAGATCAAGAACTATGAGGCTGTTGTTGTTGAAAAGCTTTGGCTTCATTCTAAGAGCCTTGAGTCTTTCAAGGCGTTATAGATCTTTAATTGGATTTTTGTAGATCGATCTCTCTCTCGGGTATATCTATCTAGCTTTTGATGATTTGAGACTCTGACGTTTGTGTTGTTGTTGGTAATATCTGTGGAATTAAAAATAAAATCAAACTTATGTTTTATGAGAATTCGTTAAGATGGATCTGCATTTGGATTGAATCGACCGACAGGATAATGATGCAACGCATACAACACGTGCGTCGACCGTGAGTTTTGACATGATCTGTTTTTTTTTTTCTTTGTTCGCGACTCGGTAATATAACTGGGTAAACTTCCATGTTCTAAATGTAGCCCGTAATTAAAAGACAAGTTTCGGGAGAATGGAAGAGTTTACATTGATTACGTATGCAGGTAAACTTTATCTAAGCCTTTTTGGAATAATGAGAGAATAGGAATATTAAGAGACCTAAGAATTTTGGAATAAACCAAGTAAGGTTAGTCTATACATACATCAACGAAGATCAATCCTTGCTAGACGGAGTTCAAGACCTAGATTTTTTTGGGATTAAACCAGGTACGGTTAGTCACTTAATCTAGGGATCAATTTGTGAAATTCAAGAAGCGGCTATAAAAATTTCGGAAGTTAGTGTAGACGTTGTTTTCGGATTCCGGTCATCATTAAACAAATGAGGGGATATTTTGTTAAATCGAGATTCACATTACATGTGAATATGTTATTGATAAAAAGAAATGATATAGTAAATTAGAGTGCAAATGGGTAATGTTTAACATGGATGTATGATGTATCATGAATGTTCTACGTCTTTGTTTAAAAAAATTCTCTTATTGGTTATG - >AT4G16500.2
ATTATATTGGATACTGGATATTAATTTAGAGAGATTTAAATGCAATAACAAATCAATTTAACCACGGTTTGGGTTTTAACGGTTGTGGATTTTTCCACCCTAGGGAATAAAACAACGGGCCAACCAGTCAAACCAGGCTATTAAGAAGCAGGGAATGAACATTGAACATAGTTCTTGACTAAAGAGCAAAACCGACGTCGTACTACAAATACTGAGTTGCCGACGCAAATCTAGATTGGCCCAAATCAACATATATGGGCCCATTTAGTGCTCTGCTCCACTACGAGTACACGTGACGGGACAACCCTCGTTGACTCTTTAACATGTTGTACATTATCTTTCGCCACGTGGACTTATCCAGTTGTCAAATCTGACGGTGTAAAAAGACAATTCACTCGTCACCGCGTAACACACAATTGAGATCTCCGTAAATTTCTGGAACTATCAGCCCACATTCCAAAGCAAAACCAAATCTACAAGTCTTGTCTATATAATAAACACCAGAGACCATTAAACACACGAAAATTAAAAAAGGTTAAGGAAACGAAAATATGATGATGAAGTCGTTGATCTGTCTCTCTCTCATCCTCCTCCCACTTGTCTCCGTCGTGGAAGGTCTCGGTGGTGGTGGTGGTCTTGGTAGCCGGAAGCCGATCAAGAATGTATCTGATCCGGATGTTGTTGCGGTCGCCAAGTATGCCATCGAGGAACATAACAAGGAGTCGAAGGAGAAGTTGGTTTTCGTCAAGGTTGTGGAGGGAACGACGCAAGTGGTCTCCGGTACAAAGTACGATCTGAAAATTGCGGCGAAGGATGGTGGTGGTAAGATCAAGAACTATGAGGCTGTTGTTGTTGAAAAGCTTTGGCTTCATTCTAAGAGCCTTGAGTCTTTCAAGGCGTTATAGATCTTTAATTGGATTTTTGTAGATCGATCTCTCTCTCGGGTATATCTATCTAGCTTTTGATGATTTGAGACTCTGACGTTTGTGTTGTTGTTGGTAATATCTGTGGAATTAAAAATAAAATCAAACTTATGTTTTATGAGAATTCGTTAAGATGGATCTGCATTTGGATTGAATCGACCGACAGGATAATGATGCAACGCATACAACACGTGCGTCGACCGTGAGTTTTGACATGATCTGTTTTTTTTTTTCTTTGTTCGCGACTCGGTAATATAACTGGGTAAACTTCCATGTTCTAAATGTAGCCCGTAATTAAAAGACAAGTTTCGGGAGAATGGAAGAGTTTACATTGATTACGTATGCAGGTAAACTTTATCTAAGCCTTTTTGGAATAATGAGAGAATAGGAATATTAAGAGACCTAAGAATTTTGGAATAAACCAAGTAAGGTTAGTCTATACATACATCAACGAAGATCAATCCTTGCTAGACGGAGTTCAAGACCTAGATTTTTTTGGGATTAAACCAGGTACGGTTAGTCACTTAATCTAGGGATCAATTTGTGAAATTCAAGAAGCGGCTATAAAAATTTCGGAAGTTAGTGTAGACGTTGTTTTCGGATTCCGGTCATCATTAAACAAATGAGGGGATATTTTGTTAAATCGAGATTCACATTACATGTGAATATGTTATTGATAAAAAGAAATGATATAGTAAATTAGAGTGCAAATGGGTAATGTTTAACATGGATGTATGATGTATCATGAATGTTCTACGTCTTTGTTTAAAAAAATTCTCTTATTGGTTATG
CDS Sequence
Protein Sequence