Information report for AT4G16420
Gene Details
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Functional Descriptions
- PO:0009013 — portion of meristem tissue — meristem (exact), meristema (Spanish, exact), meristematic tissue (exact), 分裂組織 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009631 — acts upstream of or within — cold acclimation
- GO:0005634 — located in — nucleus
- GO:0005515 — enables — protein binding
- GO:0008270 — enables — zinc ion binding
- GO:0042127 — acts upstream of or within — regulation of cell population proliferation
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0005634 — is active in — nucleus
- GO:0009735 — acts upstream of or within — response to cytokinin
- GO:0035065 — involved in — regulation of histone acetylation
- GO:0003713 — enables — transcription coactivator activity
- GO:0006338 — involved in — chromatin remodeling
- GO:0003682 — enables — chromatin binding
Functional Keywords
Literature and News
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Physical and functional interactions of Arabidopsis ADA2 transcriptional coactivator proteins with the acetyltransferase GCN5 and with the cold-induced transcription factor CBF1. DOI: 10.1016/j.bbaexp.2006.02.006 ; PMID: 16603259
- Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development. DOI: 10.1094/MPMI-19-0480 ; PMID: 16673935
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Members of the GCN5 histone acetyltransferase complex regulate PLETHORA-mediated root stem cell niche maintenance and transit amplifying cell proliferation in Arabidopsis. DOI: 10.1105/tpc.108.065300 ; PMID: 19376933
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology. DOI: 10.4161/psb.28211 ; PMID: 24614501
- Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis. DOI: 10.3390/plants2040769 ; PMID: 27137403
- Integument Development in Arabidopsis Depends on Interaction of YABBY Protein INNER NO OUTER with Coactivators and Corepressors. DOI: 10.1534/genetics.117.300140 ; PMID: 28971961
- The Transcriptional Coactivator ADA2b Recruits a Structural Maintenance Protein to Double-Strand Breaks during DNA Repair in Plants. DOI: 10.1104/pp.18.00123 ; PMID: 29463775
- A SWI/SNF subunit regulates chromosomal dissociation of structural maintenance complex 5 during DNA repair in plant cells. DOI: 10.1073/pnas.1900308116 ; PMID: 31285327
- Arabidopsis F-box protein At1g08710 interacts with transcriptional protein ADA2b and imparts drought stress tolerance by negatively regulating seedling growth. DOI: 10.1016/j.bbrc.2020.12.054 ; PMID: 33360542
- Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. DOI: 10.1016/j.molp.2021.03.014 ; PMID: 33737195
- H3.1K27me1 maintains transcriptional silencing and genome stability by preventing GCN5-mediated histone acetylation. DOI: 10.1093/plcell/koaa027 ; PMID: 33793815
- Quantitative Fluorescence Resonance Energy Transfer Analysis on the Direct Interaction of Activation-2b with Histone H3/Switch-3B Protein in Arabidopsis Mesophyll Protoplasts. DOI: 10.1007/s10895-021-02728-x ; PMID: 33880705
- A diRNA-protein scaffold module mediates SMC5/6 recruitment in plant DNA repair. DOI: 10.1093/plcell/koac191 ; PMID: 35775944
- Conserved and plant-specific histone acetyltransferase complexes cooperate to regulate gene transcription and plant development. DOI: 10.1038/s41477-023-01359-3 ; PMID: 36879016
Gene Resources
- UniProt: A0A654FQ35
- EMBL: CACRSJ010000109
- AlphaFoldDB: A0A654FQ35
- EnsemblPlants: AT4G16420.1
- Gramene: AT4G16420.1
- KEGG: ath:AT4G16420
- Orthologous matrix: YNGNHRP
- ExpressionAtlas: AT4G16420
- InterPro: IPR000433, IPR001005, IPR007526
- PANTHER: PTHR12374, PTHR12374:SF81
- SUPFAM: SSF46689, SSF57850
- PROSITE: PS01357, PS50090, PS50135
- Gene3D: 1.10.10.10, 1.10.10.60, 3.30.60.90
- OrthoDB: A0A654FQ35
- SWISS-MODEL: A0A654FQ35
- Conserved Domain Database: cd00167, cd02335
Sequences
cDNA Sequence
- >AT4G16420.1
CAACAATTAACATAAAAAATAATAGTTTTTTAAGTTGAAGTTATAAGAGTCAATTTAGTTTAAGTCATATGCTTTAGTAATAAGCATGACCGTCTAATCCCAAAAAATCTAAAAAGTACAGTGCCTTAGAAATTTCCTTTACCTCGACTTCCCTAATTTTAATCTTCTCGGTCGGAACTTCTGAATAATATTAGTAGAGATCCAAAACCTCACAAATTTCGACCGAGTTTTGTTGAATTCCGATTAGATCTTTCTTCCACGAAACCCCCCCAAGTACCCATTCCATCTTCTCCGGTGAGTCTCCCATGTTGGCATTACGCTAGGGTTCTTCTTCTCTGTGGTTTCGCATAACCCAATAATCCAATTTTCTACTTGGGCATCAATGGGTCGCTCTCGAGGGAACTTCCAAAATTTCGAAGACCCTACTCAGAGAACGAGGAAAAAGAAAAATGCGGCTAATGTGGAGAACTTTGAGTCTACTTCTTTGGTACCAGGTGCTGAGGGAGGAGGGAAGTATAACTGCGATTATTGCCAGAAAGACATTACTGGAAAAATTAGGATAAAGTGTGCTGTCTGTCCAGATTTTGATCTCTGTATAGAATGTATGTCTGTTGGAGCAGAGATCACTCCTCACAAATGTGATCACCCATACCGAGTTATGGGAAATCTAACTTTCCCGCTTATTTGTCCTGACTGGAGTGCGGATGATGAAATGCTTCTCCTGGAGGGACTTGAAATTTATGGCTTGGGAAACTGGGCAGAGGTTGCGGAGCACGTGGGAACGAAGAGTAAAGAACAGTGTCTTGAGCACTACAGAAACATCTATTTGAACTCACCATTTTTCCCACTTCCGGATATGTCACATGTAGCAGGGAAGAACAGAAAAGAACTTCAAGCCATGGCTAAAGGACGCATTGATGACAAGAAAGCAGAGCAGAACATGAAAGAAGAGTACCCGTTCTCTCCTCCTAAAGTCAAAGTTGAAGACACACAAAAAGAGTCTTTTGTAGACAGAAGTTTTGGAGGGAAGAAACCTGTTTCCACCTCGGTAAACAACTCTTTGGTTGAGCTGAGTAATTACAACCAGAAAAGAGAAGAGTTTGACCCTGAATATGACAATGATGCTGAGCAACTCTTGGCGGAGATGGAGTTCAAAGAGAACGATACTCCTGAAGAACATGAACTGAAGCTGCGTGTGTTGCGTATCTATTCAAAAAGGCTTGATGAGAGGAAACGTAGAAAAGAATTCATAATAGAAAGAAACCTGTTGTACCCAAATCCCTTTGAGAAGGACCTGTCTCAGGAGGAGAAAGTACAATGCCGACGTTTGGACGTTTTTATGCGTTTTCATTCAAAAGAGGAGCACGACGAGCTACTCCGTAATGTTGTAAGCGAGTACCGCATGGTGAAACGGCTCAAAGATCTCAAGGAAGCTCAAGTGGCAGGGTGTCGTTCAACGGCTGAAGCAGAGAGGTATCTGGGAAGGAAGAGGAAGAGAGAAAACGAAGAAGGGATGAACAGAGGGAAAGAGAGCGGTCAATTTGGTCAAATTGCAGGGGAGATGGGCTCTAGACCACCTGTGCAAGCTTCTTCAAGCTATGTGAATGATTTGGACTTGATTGGGTTCACGGAGTCGCAACTGCTGTCTGAATCCGAGAAGCGTCTCTGCAGCGAGGTCAAGTTGGTTCCACCGGTTTATCTACAGATGCAACAAGTGATGTCACATGAGATATTCAAAGGGAATGTAACGAAGAAGTCGGATGCATATAGCCTTTTCAAGATTGATCCAACCAAAGTGGATCGAGTTTATGATATGCTTGTGAAGAAGGGTATTGCTCAACTTTAAGGCTTGTGTAGTGTTGTATCATATATATATATGTGTGAGCTCTAATGAGTTATTTGTTGACATTCCCTTGTTTATTACACCTTGTCAAAATTAGTTTGTAATAGAAAAACGATTAAGTTATCCACAGATTGTGAAAAGAGATAAGGTGAATCAGAGCCACACAATCTAAACCAAATGTTTTAGT - >AT4G16420.3
CAACAATTAACATAAAAAATAATAGTTTTTTAAGTTGAAGTTATAAGAGTCAATTTAGTTTAAGTCATATGCTTTAGTAATAAGCATGACCGTCTAATCCCAAAAAATCTAAAAAGTACAGTGCCTTAGAAATTTCCTTTACCTCGACTTCCCTAATTTTAATCTTCTCGGTCGGAACTTCTGAATAATATTAGTAGAGATCCAAAACCTCACAAATTTCGACCGAGTTTTGTTGAATTCCGATTAGATCTTTCTTCCACGAAACCCCCCCAAGTACCCATTCCATCTTCTCCGGTGAGTCTCCCATGTTGGCATTACGCTAGGGTTCTTCTTCTCTGTGGTTTCGCATAACCCAATAATCCAATTTTCTACTTGGGCATCAATGGGTCGCTCTCGAGGGAACTTCCAAAATTTCGAAGACCCTACTCAGAGAACGAGGAAAAAGAAAAATGCGGCTAATGTGGAGAACTTTGAGTCTACTTCTTTGGTACCAGGTGCTGAGGGAGGAGGGAAGTATAACTGCGATTATTGCCAGAAAGACATTACTGGAAAAATTAGGATAAAGTGTGCTGTCTGTCCAGATTTTGATCTCTGTATAGAATGTATGTCTGTTGGAGCAGAGATCACTCCTCACAAATGTGATCACCCATACCGAGTTATGGGAAATCTAACTTTCCCGCTTATTTGTCCTGACTGGAGTGCGGATGATGAAATGCTTCTCCTGGAGGGACTTGAAATTTATGGCTTGGGAAACTGGGCAGAGGTTGCGGAGCACGTGGGAACGAAGAGTAAAGAACAGTGTCTTGAGCACTACAGAAACATCTATTTGAACTCACCATTTTTCCCACTTCCGGATATGTCACATGTAGCAGGGAAGAACAGAAAAGAACTTCAAGCCATGGCTAAAGGACGCATTGATGACAAGAAAGCAGAGCAGAACATGAAAGAAGAGTACCCGTTCTCTCCTCCTAAAGTCAAAGTTGAAGACACACAAAAAGAGTCTTTTGTAGACAGAAGTTTTGGAGGGAAGAAACCTGTTTCCACCTCGGTAAACAACTCTTTGGTTGAGCTGAGTAATTACAACCAGAAAAGAGAAGAGTTTGACCCTGAATATGACAATGATGCTGAGCAACTCTTGGCGGAGATGGAGTTCAAAGAGAACGATACTCCTGAAGAACATGAACTGAAGCTGCGTGTGTTGCGTATCTATTCAAAAAGGCTTGATGAGAGGAAACGTAGAAAAGAATTCATAATAGAAAGAAACCTGTTGTACCCAAATCCCTTTGAGAAGGACCTGTCTCAGGAGGAGAAAGTACAATGCCGACGTTTGGACGTTTTTATGCGTTTTCATTCAAAAGAGGAGCACGACGAGCTACTCCGTAATGTTGTAAGCGAGTACCGCATGGTGAAACGGCTCAAAGATCTCAAGGAAGCTCAAGTGGCAGGGTGTCGTTCAACGGCTGAAGCAGAGAGGTATCTGGGAAGGAAGAGGAAGAGAGAAAACGAAGAAGGGATGAACAGAGGGAAAGAGAGCGGTCAATTTGGTCAAATTGCAGGGGAGATGGGCTCTAGACCACCTGTGCAAGCTTCTTCAAGCTATGTGAATGATTTGGACTTGATTGGGTTCACGGAGTCGCAACTGCTGTCTGAATCCGAGAAGCGTCTCTGCAGCGAGGTCAAGTTGGTTCCACCGGTTTATCTACAGATGCAACAAGTGATGTCACATGAGATATTCAAAGGGAATGTAACGAAGAAGTCGGATGCATATAGCCTTTTCAAGATTGATCCAACCAAAGTGGATCGAGTTTATGATATGCTTGTGAAGAAGGGTATTGCTCAACTTTAAGGCTTGTGTAGTGTTGTATCATATATATATATGTGTGAGCTCTAATGAGTTATTTGTTGACATTCCCTTGTTTATTACACCTTGTCAAAATTAGTTTGTAATAGAAAAACGATTAAGTTATCCACAGATTGTGAAAAGAGATAAGGTGAATCAGAGCCACACAATCTAAACCAAATGTTTTAGT - >AT4G16420.2
CAACAATTAACATAAAAAATAATAGTTTTTTAAGTTGAAGTTATAAGAGTCAATTTAGTTTAAGTCATATGCTTTAGTAATAAGCATGACCGTCTAATCCCAAAAAATCTAAAAAGTACAGTGCCTTAGAAATTTCCTTTACCTCGACTTCCCTAATTTTAATCTTCTCGGTCGGAACTTCTGAATAATATTAGTAGAGATCCAAAACCTCACAAATTTCGACCGAGTTTTGTTGAATTCCGATTAGATCTTTCTTCCACGAAACCCCCCCAAGTACCCATTCCATCTTCTCCGGTGAGTCTCCCATGTTGGCATTACGCTAGGGTTCTTCTTCTCTGTGGTTTCGCATAACCCAATAATCCAATTTTCTACTTGGGCATCAATGGGTCGCTCTCGAGGGAACTTCCAAAATTTCGAAGACCCTACTCAGAGAACGAGGAAAAAGAAAAATGCGGCTAATGTGGAGAACTTTGAGTCTACTTCTTTGGTACCAGGTGCTGAGGGAGGAGGGAAGTATAACTGCGATTATTGCCAGAAAGACATTACTGGAAAAATTAGGATAAAGTGTGCTGTCTGTCCAGATTTTGATCTCTGTATAGAATGTATGTCTGTTGGAGCAGAGATCACTCCTCACAAATGTGATCACCCATACCGAGTTATGGGAAATCTAACTTTCCCGCTTATTTGTCCTGACTGGAGTGCGGATGATGAAATGCTTCTCCTGGAGGGACTTGAAATTTATGGCTTGGGAAACTGGGCAGAGGTTGCGGAGCACGTGGGAACGAAGAGTAAAGAACAGTGTCTTGAGCACTACAGAAACATCTATTTGAACTCACCATTTTTCCCACTTCCGGATATGTCACATGTAGCAGGGAAGAACAGAAAAGAACTTCAAGCCATGGCTAAAGGACGCATTGATGACAAGAAAGCAGAGCAGAACATGAAAGAAGAGTACCCGTTCTCTCCTCCTAAAGTCAAAGTTGAAGACACACAAAAAGAGTCTTTTGTAGACAGAAGTTTTGGAGGGAAGAAACCTGTTTCCACCTCGGTAAACAACTCTTTGGTTGAGCTGAGTAATTACAACCAGAAAAGAGAAGAGTTTGACCCTGAATATGACAATGATGCTGAGCAACTCTTGGCGGAGATGGAGTTCAAAGAGAACGATACTCCTGAAGAACATGAACTGAAGCTGCGTGTGTTGCGTATCTATTCAAAAAGGCTTGATGAGAGGAAACGTAGAAAAGAATTCATAATAGAAAGAAACCTGTTGTACCCAAATCCCTTTGAGAAGGACCTGTCTCAGGAGGAGAAAGTACAATGCCGACGTTTGGACGTTTTTATGCGTTTTCATTCAAAAGAGGAGCACGACGAGCTACTCCGTAATGTTGTAAGCGAGTACCGCATGGTGAAACGGCTCAAAGATCTCAAGGAAGCTCAAGTGGCAGGGTGTCGTTCAACGGCTGAAGCAGAGAGGTATCTGGGAAGGAAGAGGAAGAGAGAAAACGAAGAAGGGATGAACAGAGGGAAAGAGAGCGGTCAATTTGGTCAAATTGCAGGGGAGATGGGCTCTAGACCACCTGTGCAAGCTTCTTCAAGCTATGTGAATGATTTGGACTTGATTGGGTTCACGGAGTCGCAACTGCTGTCTGAATCCGAGAAGCGTCTCTGCAGCGAGGTCAAGTTGGTTCCACCGGTTTATCTACAGATGCAACAAGTGATGTCACATGAGATATTCAAAGGGAATGTAACGAAGAAGTCGGATGCATATAGCCTTTTCAAGATTGATCCAACCAAAGTGGATCGAGTTTATGATATGCTTGTGAAGAAGGGTATTGCTCAACTTTAAGGCTTGTGTAGTGTTGTATCATATATATATATGTGTGAGCTCTAATGAGTTATTTGTTGACATTCCCTTGTTTATTACACCTTGTCAAAATTAGTTTGTAATAGAAAAACGATTAAGTTATCCACAGATTGTGAAAAGAGATAAGGTGAATCAGAGCCACACAATCTAAACCAAATGTTTTAGT
CDS Sequence
Protein Sequence