Gene Details:
- Gene ID: AT4G16390
- Gene Symbol: SVR7
- Gene Name: suppressor of variegation 7
- Description: pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)
- TAIR Accession: locus:2130549
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0003729 — enables — mRNA binding
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0009507 — located in — chloroplast
- GO:0045727 — involved in — positive regulation of translation
- GO:0045727 — acts upstream of or within — positive regulation of translation
- GO:0009570 — is active in — chloroplast stroma
- GO:0009570 — located in — chloroplast stroma
- GO:0031425 — acts upstream of or within — chloroplast RNA processing
- GO:0042134 — enables — rRNA primary transcript binding
Function-related keywords:
Literature:
- Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis. DOI: 10.1105/tpc.104.022236 ; PMID: 15269332
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- An Arabidopsis pentatricopeptide repeat protein, SUPPRESSOR OF VARIEGATION7, is required for FtsH-mediated chloroplast biogenesis. DOI: 10.1104/pp.110.164111 ; PMID: 20935174
- A var2 leaf variegation suppressor locus, SUPPRESSOR OF VARIEGATION3, encodes a putative chloroplast translation elongation factor that is important for chloroplast development in the cold. DOI: 10.1186/1471-2229-10-287 ; PMID: 21187014
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT4G16390.1
ACAGAAACACTAAAACAACACATTTCGTCTCTATCATTCTTTTTCTTCTACAAAGTTGCAGAGACTGTTGGATAAGGTCTCGAGGCTGCAACTGCGAACAAAGTACCCACAAAAAAATGTCATTTCATCATCTATGTTCCTCTCCCTCGTCTCTTCTACATGACCCTCTTCCTCTCTGCAATCTTCTCTCAGTGTATCCCAAATCCACACCAAGAAGTTTCCTCTCCTCTTACAATCCCAATTCTTCTCATTTCCACTCCAGAAACCTTCTCCAAGCAACCCATGTTTCAGTACAAGAAGCGATTCCACAGAGTGAAAAATCCAAACTTGTTGATGTAGATCTTCCTATACCAGAACCTACTGCTTCCAAAAGCTACGTCTGGGTTAATCCCAAAAGCCCCAGAGCTTCTCAGCTCCGTAGAAAATCTTACGATTCGAGGTACTCTTCTCTTATCAAACTAGCTGAGTCTCTTGACGCGTGTAAGCCAAACGAAGCTGATGTTTGCGATGTCATTACTGGGTTTGGTGGTAAATTGTTTGAGCAAGATGCTGTTGTTACTCTCAATAACATGACTAACCCAGAAACTGCGCCACTTGTGTTGAATAATCTCTTGGAGACGATGAAACCTAGCAGGGAAGTGATTCTCTACAATGTTACCATGAAGGTGTTTAGGAAAAGCAAGGATCTTGAAAAGTCAGAGAAGCTGTTCGATGAAATGCTTGAGAGAGGGATTAAACCGGATAATGCAACTTTCACTACGATAATTAGTTGTGCTAGGCAGAATGGTGTACCTAAGAGAGCTGTTGAGTGGTTTGAGAAAATGTCTTCTTTTGGATGTGAGCCTGATAATGTCACTATGGCTGCTATGATTGATGCTTACGGGCGTGCTGGTAACGTTGACATGGCTTTGAGTTTGTATGATCGAGCAAGGACTGAGAAATGGCGTATTGACGCTGTTACTTTTTCGACTTTGATTAGGATTTATGGTGTTTCTGGAAACTATGATGGGTGTCTCAATATCTATGAAGAAATGAAGGCTCTTGGGGTGAAGCCTAATCTGGTTATTTACAATAGGTTGATAGATTCTATGGGTAGAGCCAAGAGGCCTTGGCAGGCTAAAATTATCTACAAGGATCTTATTACCAATGGCTTTACTCCCAATTGGAGTACTTATGCTGCTCTTGTTAGAGCCTATGGTAGAGCTCGTTATGGCGATGATGCACTTGCTATCTACCGAGAGATGAAGGAGAAGGGATTGTCTTTAACTGTGATTCTTTACAATACTCTCTTGTCCATGTGTGCTGATAATCGATATGTTGATGAGGCTTTTGAGATTTTTCAAGATATGAAGAATTGTGAGACTTGTGATCCGGACAGCTGGACCTTCTCTTCGTTGATCACTGTGTACGCTTGTAGTGGGAGGGTTTCAGAGGCCGAGGCGGCTCTTCTTCAAATGAGAGAAGCTGGTTTTGAGCCTACTCTTTTTGTTCTGACGTCAGTTATCCAGTGTTATGGGAAAGCCAAGCAGGTAGATGATGTTGTGAGGACATTCGATCAAGTGTTGGAACTGGGTATAACTCCGGACGACAGATTTTGTGGGTGTCTTCTGAATGTAATGACCCAGACACCGAGTGAGGAAATCGGTAAACTCATTGGCTGTGTCGAGAAGGCTAAGCCAAAGCTTGGTCAAGTGGTTAAGATGTTGGTCGAGGAGCAAAACTGCGAGGAAGGGGTGTTCAAGAAGGAAGCATCTGAGTTGATTGATTCCATTGGATCTGATGTAAAGAAAGCATATTTGAATTGCTTGATTGATCTCTGTGTCAATCTCAATAAGTTGGAAAGAGCTTGTGAGATCCTACAACTAGGACTTGAGTATGACATTTATACGGGTCTTCAATCAAAATCTGCTACCCAATGGTCCTTACATCTAAAAAGTCTCTCTTTGGGGGCAGCTTTGACCGCTCTTCATGTTTGGATGAATGACTTATCAGAAGCGGCTCTTGAATCCGGTGAAGAGTTCCCTCCGTTGCTTGGAATCAACACTGGACATGGAAAACACAAATACTCAGACAAAGGTCTAGCAGCTGTTTTCGAGTCTCACTTGAAGGAGCTAAATGCTCCTTTCCATGAAGCCCCAGATAAGGTTGGCTGGTTTTTGACTACCAGTGTTGCGGCAAAGGCATGGTTGGAGTCTAGACGCTCAGCTGGAGGAGTTTCTGCGTAGCTCTTGTAATTGGTATGTAGCTTTGATATTGTCTATGTGGCTTCGAGCTTTCTCCACTATTTAGCTTTCTTTCTCCTGATACCGGATACTGGATCAGGAAAGATTTTGTAATGCTAGCAAACTCGGGTTATACACATTTTGAAACAATTTAGAGAACTGATTAAGTTTCATTCTCCTTAGTTTCATTTCATGGTCTTCTCTGCATATCCTTCTATTGACTTTAATACTGGGGCGG
CDS Sequence
Protein Sequence