Information report for AT4G16210
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0019538 — acts upstream of or within — protein metabolic process
- GO:0006635 — involved in — fatty acid beta-oxidation
- GO:0005777 — located in — peroxisome
- GO:0004300 — enables — enoyl-CoA hydratase activity
- GO:0005739 — located in — mitochondrion
Functional Keywords
Literature and News
- Impact of unusual fatty acid synthesis on futile cycling through beta-oxidation and on gene expression in transgenic plants. DOI: 10.1104/pp.103.032938 ; PMID: 14671017
- AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. DOI: 10.1104/pp.104.043695 ; PMID: 15333753
- Molecular identification and characterization of the Arabidopsis delta(3,5),delta(2,4)-dienoyl-coenzyme A isomerase, a peroxisomal enzyme participating in the beta-oxidation cycle of unsaturated fatty acids. DOI: 10.1104/pp.105.064311 ; PMID: 16040662
- Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. DOI: 10.1007/s11103-006-9075-1 ; PMID: 17120136
- Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. DOI: 10.1105/tpc.107.050989 ; PMID: 17951448
- A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis. DOI: 10.1105/tpc.107.054858 ; PMID: 18326828
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins. DOI: 10.1007/s11103-008-9431-4 ; PMID: 19043666
- The proteome map of spinach leaf peroxisomes indicates partial compartmentalization of phylloquinone (vitamin K1) biosynthesis in plant peroxisomes. DOI: 10.1093/jxb/erq014 ; PMID: 20150517
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins. DOI: 10.1007/s11103-008-9431-4 ; PMID: 19043666
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A654FQ16
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A654FQ16
- EnsemblPlants: AT4G16210.1
- Gramene: AT4G16210.1
- KEGG: ath:AT4G16210
- Orthologous matrix: SCDMVVC
- ExpressionAtlas: AT4G16210
- InterPro: IPR001753, IPR029045
- PANTHER: PTHR43802, PTHR43802:SF1
- SUPFAM: SSF52096
- Gene3D: 3.90.226.10
- OrthoDB: A0A654FQ16
- SWISS-MODEL: A0A654FQ16
- Conserved Domain Database: cd06558
Sequences
cDNA Sequence
- >AT4G16210.1
GCGTCTAAAATAGAAGCAAAAAACGGGACGTTGTTTACTAACAACGACAAAACAATGGCACACTTACCCAAGTTCTTCGTCATCTCTTCCTGATTGACTCTATTTAAAAACCCGATCGGAAAATTCGAAATCCGTTCAATTGTAATCGGAATCGTCGAAAAATGGATCAAACAGTATCGGAAAATCTCATTCAGGTGAAGAAAGAATCAGGCGGGATCGCCGTCATCACAATCAACCGTCCGAAATCTCTCAATTCACTCACGAGAGCGATGATGGTTGATCTCGCCAAGGCATTCAAGGATATGGACTCCGACGAATCGGTCCAGGTCGTGATTTTCACCGGATCAGGTCGATCTTTCTGCTCTGGCGTTGATTTGACTGCGGCGGAGTCTGTTTTCAAAGGAGACGTGAAGGATCCGGAAACCGACCCGGTTGTGCAGATGGAGCGGTTACGTAAACCGATCATCGGAGCTATTAACGGTTTTGCCATCACCGCCGGGTTTGAACTCGCCTTGGCCTGTGATATTTTGGTCGCTTCTAGAGGAGCTAAGTTCATGGATACTCACGCCAGGTTTGGGATATTTCCTTCATGGGGTTTGTCTCAGAAGCTGTCGAGGATCATCGGAGCAAACAAAGCTCGAGAAGTTTCTTTAACATCGATGCCACTGACAGCAGACGTGGCTGGGAAGTTAGGGTTTGTAAACCATGTGGTTGAAGAAGGAGAAGCGTTAAAGAAAGCTAGAGAAATCGCAGAGGCTATAATCAAGAATGAACAAGGCATGGTTCTGAGGATTAAATCCGTTATCAATGATGGACTTAAGCTTGATCTTGGGCATGCTCTCACACTAGAAAAGGAGCGAGCTCACGCGTATTACAGTGGGATGACGAAGGAACAGTTTAGAAAGATGCAGGAGTTTATAGCCGGACGTGGATCCAAGAAACCTTCTTCTAAGTTGTAGACAGTTTCTCTATGGATCTTAAAATAATACTTACTACTTTGTACCATTTCTTAATTTACATTTTGATTAGTGTCTTACAATAAGAATATCTTTGTTTGTTTCAAATCAAGTATGTAGTCTAAGATACGTATCTCTCAGCTTTAGACATATGTTGGTAAAATTTATGGAATTGATAACTGTATCAGGATTATAAGTCCAAAGCTTTAGAAACAAACAATATTAAGTGAATAAAATGCATGCTTGTTCTAGCCTGCACAAGCATTGTCCATCTCTCTGTCTCAGACCACGACGTGCAGTATTAGGATATCTCCTCCTCTGACATTGTAATGAGCAAGTGACCTATTACTGTATAAGCAGCACGACCC
CDS Sequence
Protein Sequence