Information report for AT4G16120
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005794 — located in — Golgi apparatus
- GO:0052324 — acts upstream of or within — plant-type cell wall cellulose biosynthetic process
- GO:0010215 — involved in — cellulose microfibril organization
- GO:0005768 — located in — endosome
- GO:0016020 — located in — membrane
- GO:0048768 — acts upstream of or within — root hair cell tip growth
- GO:0005802 — located in — trans-Golgi network
- GO:0009506 — located in — plasmodesma
- GO:0005886 — located in — plasma membrane
- GO:0003674 — enables — molecular_function
Functional Keywords
Literature and News
- Yeast protein translocation complex: isolation of two genes SEB1 and SEB2 encoding proteins homologous to the Sec61 beta subunit. DOI: 10.1002/(SICI)1097-0061(199604)12:5%3C425::AID-YEA924%3E3.0.CO;2-B ; PMID: 8740416
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion. DOI: 10.1104/pp.007468 ; PMID: 12376623
- The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium. DOI: 10.1104/pp.102.017798 ; PMID: 12805595
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive and genome-wide studies for Arabidopsis and rice. DOI: 10.1104/pp.103.023580 ; PMID: 14681532
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Peroxisomal metabolism of propionic acid and isobutyric acid in plants. DOI: 10.1074/jbc.M701028200 ; PMID: 17580301
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
Gene Resources
Sequences
cDNA Sequence
- >AT4G16120.1
ATCCATAAAGTTTCTTAGATTTTCAACAAAAGAAAAAGCAAAAAAAGCCAACAAAAAATGCTCCAGGGAAAATTTGAATTGCAAATACAAACATTTTTCATTACAGCTTGCACTATCGCGGTCGCTTTATCAGTCATCATCTCTTCAAAAGCTTCCATTTTTCTAACTTCTCTCAATTCCCAAACAAAATTCAAATTCAAAAAACTTCTCTTTTTGACTAAGAGCGAGATTTTAGGGTTCCATGGATTCAGCTCCCAACTTCATCCCTCGGTTACTTCTACTATCACTTCTCATCGTATCAATTCCTCTAACATCATCACAATCCGACGCCAACACTACTAATCCGTCACCGTCACCACCGTCAGATTCGGATCTATGCAACGGTGTATTCGTTTCATACACTCACACTAAAGGATCTAAGATCCCACCCAACGACACCGCAAATCAACCCTACCGGTTCGAATCTGTGATAACAGTGCTCAACCACGGCCGCGACGAGCTCAAATCATGGCGTGTCTTCGTCAAATTCGCACACCGAGAGATCCTCGTCTCTGCTTCAAACGCTGTACTCTCAGACGGCTCGAGCTTACCGGTGAGCGTCGAAAACGGTACCGTTTTCGCTGGTTATCCTTCGTCGGATTTGAAATCAGCTATTCAGACTGCTGGTGATGTCACTCAGATGCAAGCTCGTGTTGAGCTCGTCGGGACTCAGTTCGGAGTTGCGCCGCCGAATGTGCCGCTTCCTAAGAACATCACTCTCGCTACTGATGGATGGAAATGTCCCAAAGCTACTCAAAAAGGTACAAATGTTCTGCAAGTATGTTGCATTCCTGACCCAGACTATGATAACAGAGAGATCATTGATAATGAGTTTCTTCCACGAAAAGATGGAGACCTCACTATCATGTACGATGTGGTCAGATCATATTCATCCAATTATATGGCACAGGTCACTATGGAGAACCATAACCCGCTTGGCCGGCTGGATAACTGGAAACTGAGTTTTGACTGGATGCGGGACGAGTTTATCTACACCATGAAAGGGGCTTACCCGAGTATTGTTGATTCATCAGATTGTGTTGATGGCCCACAGGCGAAGCACTATCAAGATCTTGACTTCTCTAACGTGTTAAGCTGTGCAAGACGGCCAACCGTCATAGATCTCCCTCCTACGAAATACAATGATTCGACATTCGGTCTTATCCCATTTTGCTGCAGAAATGGGACGATTCTACCACGGTCAATGGATCCTAGCAAGTCGAGCTCAGTTTTCCAGATGCAGGTGTACAAAATGCCTCCTGATCTCAATATCTCTGCTCTATCACCGCCTCAGAACTGGAGAATAAACGGTACACTGAACCCGGATTACAAGTGTGGCCCTCCTGTTCGGGTGAGCCCGAGCCAGTTCGTCGATCCCAGTGGATTACCTTCAAACCGGACTGCTTTTGCAAGCTGGCAGGTGGTCTGCAACATCACCCAACCAAAAGATGCGAGTCCTAGATGTTGTGTATCGTTCTCTGCCTACTTCAACGACTCAATCGTCCCATGCAAGACATGTGCTTGCGGGTGTTCCAGCAACAAAGCAGCCCGCGCTTGCAGTGCCACAGCTCCGTCTCTTCTTCTACCGCAGCAAGCTCTTCTGGTTCCATTTGAGAACCGAACTGAACTCACCGTCGCTTGGGCTTATCTAAAACAACGGCCCGTGCCAAACCCGATGCCTTGTGGGGATAACTGCGGAGTTAGCATCAACTGGCATTTGGCTACAGATTATCGAGGTGGATGGACAGCCCGGGTCACAGTCTTCAACTGGGGAGAAACAGACTTTGTAGATTGGTTTACCGCGGTTCAGATGAAAAATGCTGCACCGGGTTTCGAGAAAGCCTACTCATTCAATGCATCTACAATTGGTATCAACGGGAAGAACAATACTATTTTCATGGAGGGCCTTCCTGGATTGAATTATCTCGTCGCAGAAAGAGACGGGGAAAATCCATTGAAGAATCCTCGGATTCCAGGAAAACAACAATCTGTTATGTCCTTTACTAAGAAACTGACTCCTGGAATCAATGTCCCTGGTGGAGATGGCTTCCCGAGCAAAGTGTTCTTCAACGGTGAGGAGTGCTCTCTCCCAACCATACTCCCAATGAGAAGTAGCCAACACCGGAAACACATCTCTGTTTTCCTCCTGGCATTACCTGTTTTGGCTCTCTTGATTCTGCGGGCGTAACTACACTGAAGCCTCCCGTTGGGTTGGCGATACAGTTTCTTGATTCTTCCCCGGCTTACTCGAGAACGGGTCCAATCCGCAGTTTATGGATGGAGAATCACTCGATTCTTTTTCAACCTGATGAGTGTTGGAACAAGCTTTATATAGGTGCTATGAAGATATGTTACCATTCTTGTATTGTTTATGATTAGAGAATGTCAGTAATCACTAATCAGTATGTATTACTATATTTTGTTTACTCATTCTCCGCCATTGGTTTGTTCCTAATCCTCCAAACCGGTATTCATATAAGTTCACAAATAACCGAACCAACCAGTTCTTGTCTGAGAAGCAAATACACTGTAGTAAAACTGGTAAAGGCTCAGAAAATAGCAGAACTGGT
CDS Sequence
- >AT4G16120.1
ATGGATTCAGCTCCCAACTTCATCCCTCGGTTACTTCTACTATCACTTCTCATCGTATCAATTCCTCTAACATCATCACAATCCGACGCCAACACTACTAATCCGTCACCGTCACCACCGTCAGATTCGGATCTATGCAACGGTGTATTCGTTTCATACACTCACACTAAAGGATCTAAGATCCCACCCAACGACACCGCAAATCAACCCTACCGGTTCGAATCTGTGATAACAGTGCTCAACCACGGCCGCGACGAGCTCAAATCATGGCGTGTCTTCGTCAAATTCGCACACCGAGAGATCCTCGTCTCTGCTTCAAACGCTGTACTCTCAGACGGCTCGAGCTTACCGGTGAGCGTCGAAAACGGTACCGTTTTCGCTGGTTATCCTTCGTCGGATTTGAAATCAGCTATTCAGACTGCTGGTGATGTCACTCAGATGCAAGCTCGTGTTGAGCTCGTCGGGACTCAGTTCGGAGTTGCGCCGCCGAATGTGCCGCTTCCTAAGAACATCACTCTCGCTACTGATGGATGGAAATGTCCCAAAGCTACTCAAAAAGGTACAAATGTTCTGCAAGTATGTTGCATTCCTGACCCAGACTATGATAACAGAGAGATCATTGATAATGAGTTTCTTCCACGAAAAGATGGAGACCTCACTATCATGTACGATGTGGTCAGATCATATTCATCCAATTATATGGCACAGGTCACTATGGAGAACCATAACCCGCTTGGCCGGCTGGATAACTGGAAACTGAGTTTTGACTGGATGCGGGACGAGTTTATCTACACCATGAAAGGGGCTTACCCGAGTATTGTTGATTCATCAGATTGTGTTGATGGCCCACAGGCGAAGCACTATCAAGATCTTGACTTCTCTAACGTGTTAAGCTGTGCAAGACGGCCAACCGTCATAGATCTCCCTCCTACGAAATACAATGATTCGACATTCGGTCTTATCCCATTTTGCTGCAGAAATGGGACGATTCTACCACGGTCAATGGATCCTAGCAAGTCGAGCTCAGTTTTCCAGATGCAGGTGTACAAAATGCCTCCTGATCTCAATATCTCTGCTCTATCACCGCCTCAGAACTGGAGAATAAACGGTACACTGAACCCGGATTACAAGTGTGGCCCTCCTGTTCGGGTGAGCCCGAGCCAGTTCGTCGATCCCAGTGGATTACCTTCAAACCGGACTGCTTTTGCAAGCTGGCAGGTGGTCTGCAACATCACCCAACCAAAAGATGCGAGTCCTAGATGTTGTGTATCGTTCTCTGCCTACTTCAACGACTCAATCGTCCCATGCAAGACATGTGCTTGCGGGTGTTCCAGCAACAAAGCAGCCCGCGCTTGCAGTGCCACAGCTCCGTCTCTTCTTCTACCGCAGCAAGCTCTTCTGGTTCCATTTGAGAACCGAACTGAACTCACCGTCGCTTGGGCTTATCTAAAACAACGGCCCGTGCCAAACCCGATGCCTTGTGGGGATAACTGCGGAGTTAGCATCAACTGGCATTTGGCTACAGATTATCGAGGTGGATGGACAGCCCGGGTCACAGTCTTCAACTGGGGAGAAACAGACTTTGTAGATTGGTTTACCGCGGTTCAGATGAAAAATGCTGCACCGGGTTTCGAGAAAGCCTACTCATTCAATGCATCTACAATTGGTATCAACGGGAAGAACAATACTATTTTCATGGAGGGCCTTCCTGGATTGAATTATCTCGTCGCAGAAAGAGACGGGGAAAATCCATTGAAGAATCCTCGGATTCCAGGAAAACAACAATCTGTTATGTCCTTTACTAAGAAACTGACTCCTGGAATCAATGTCCCTGGTGGAGATGGCTTCCCGAGCAAAGTGTTCTTCAACGGTGAGGAGTGCTCTCTCCCAACCATACTCCCAATGAGAAGTAGCCAACACCGGAAACACATCTCTGTTTTCCTCCTGGCATTACCTGTTTTGGCTCTCTTGATTCTGCGGGCGTAA
Protein Sequence
- >AT4G16120.1
MDSAPNFIPRLLLLSLLIVSIPLTSSQSDANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPPNDTANQPYRFESVITVLNHGRDELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGYPSSDLKSAIQTAGDVTQMQARVELVGTQFGVAPPNVPLPKNITLATDGWKCPKATQKGTNVLQVCCIPDPDYDNREIIDNEFLPRKDGDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLDNWKLSFDWMRDEFIYTMKGAYPSIVDSSDCVDGPQAKHYQDLDFSNVLSCARRPTVIDLPPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQPKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDNCGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDGFPSKVFFNGEECSLPTILPMRSSQHRKHISVFLLALPVLALLILRA