Gene Details:
- Gene ID: AT4G15940
- Gene Symbol: FAHD1a
- Gene Name: fumarylacetoacetate hydrolase domain containing protein 1a
- Description: Fumarylacetoacetate (FAA) hydrolase family;(source:Araport11)
- TAIR Accession: locus:2129815
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005739 — located in — mitochondrion
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0018773 — enables — acetylpyruvate hydrolase activity
- GO:0005739 — is active in — mitochondrion
- GO:0005507 — enables — copper ion binding
- GO:0005829 — located in — cytosol
- GO:0005737 — located in — cytoplasm
- GO:0033993 — acts upstream of or within — response to lipid
Function-related keywords:
Literature:
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- AtFAHD1a: A New Player Influencing Seed Longevity and Dormancy in Arabidopsis? DOI: 10.3390/ijms22062997 ; PMID: 33804275
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT4G15940.1
TTACATGTGAAAAAACAGAAGTTTGGGATTGAAATAGTAAATTCTGTTTTGGAAGTGATTCAATCACAAAATTACAAAAGTTACCGAATTCCATTTCTCCACGATTCTGACCAAAAAAAGGAGAAGGAATAAGAGAAAAGTGAGTTTGTTGTTTGTATCGATCAGAAAATGGCGACGTCGATGATACAGAGGATGTTCAAGCAAGGGACGAAGATCGTCTGCGTCGGCCGTAACTACGCCGCTCACGCCAAAGAACTAGGCAACGCCGTCCCCAAGGAACCAGTTATATTCTTGAAGCCAACATCATCATACTTAGAAAATGGAGGAACAATTGAGATCCCACATCCTTTGGATTCACTTCACCATGAAGTAGAACTCGCTTTAGTGATTGGACAGAAAGCTAGAGATGTACCTGAATCAATAGCCATGGATTACATTGGAGGATATGCGGTTGCTCTTGATATGACTGCTAGGGAACTCCAAGCTTCTGCTAAGGCATCTGGTCTCCCATGGACGGTTGCGAAAGGACAAGATACCTTCACTCCTATCAGCTCTGTTCTGCCAAAGGCGATGGTGCGTGATCCCGATAATCTAGAACTTTGGCTCAAGGTTGATGGTGAAACAAGACAGAAGGGTTTGACCAAAGATATGATATTCAAGGTCCCCTACCTCATTAGCTACATAAGTTCTATAATGACCCTTTACGGAGATGTCATCTTGACAGGCACACCAGAAGGTGTTGGACCTGTAAAGATAGGTCAGAAGATAACGGCCGGAATCACCGGTCTATCTGAAGTTCAATTCGATGTGGAGAGGCGTGTAAAGCCCTTGAGCTAATAAGTGGTTTTATTTATCTTTCATACAAAAATGTCAATTTTATAAAAGCATCTCTAAAATTTTCATCACTTACTGTGTTTCCTAAGGAAGGGAGAAATAAAACTCGTTACTCATTTTATTTGTAATCTCTATAACAATGGCTCTAAGACCGGTTTAAATTGTTTATATGGGAGAGTATTTGTAAAGTTGTGATATTTACTGTTGGAA
CDS Sequence
- >AT4G15940.1
ATGGCGACGTCGATGATACAGAGGATGTTCAAGCAAGGGACGAAGATCGTCTGCGTCGGCCGTAACTACGCCGCTCACGCCAAAGAACTAGGCAACGCCGTCCCCAAGGAACCAGTTATATTCTTGAAGCCAACATCATCATACTTAGAAAATGGAGGAACAATTGAGATCCCACATCCTTTGGATTCACTTCACCATGAAGTAGAACTCGCTTTAGTGATTGGACAGAAAGCTAGAGATGTACCTGAATCAATAGCCATGGATTACATTGGAGGATATGCGGTTGCTCTTGATATGACTGCTAGGGAACTCCAAGCTTCTGCTAAGGCATCTGGTCTCCCATGGACGGTTGCGAAAGGACAAGATACCTTCACTCCTATCAGCTCTGTTCTGCCAAAGGCGATGGTGCGTGATCCCGATAATCTAGAACTTTGGCTCAAGGTTGATGGTGAAACAAGACAGAAGGGTTTGACCAAAGATATGATATTCAAGGTCCCCTACCTCATTAGCTACATAAGTTCTATAATGACCCTTTACGGAGATGTCATCTTGACAGGCACACCAGAAGGTGTTGGACCTGTAAAGATAGGTCAGAAGATAACGGCCGGAATCACCGGTCTATCTGAAGTTCAATTCGATGTGGAGAGGCGTGTAAAGCCCTTGAGCTAA
Protein Sequence
- >AT4G15940.1
MATSMIQRMFKQGTKIVCVGRNYAAHAKELGNAVPKEPVIFLKPTSSYLENGGTIEIPHPLDSLHHEVELALVIGQKARDVPESIAMDYIGGYAVALDMTARELQASAKASGLPWTVAKGQDTFTPISSVLPKAMVRDPDNLELWLKVDGETRQKGLTKDMIFKVPYLISYISSIMTLYGDVILTGTPEGVGPVKIGQKITAGITGLSEVQFDVERRVKPLS