Information report for AT4G15640
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0043412 — acts upstream of or within — macromolecule modification
- GO:0005739 — located in — mitochondrion
- GO:0009507 — located in — chloroplast
- GO:0003729 — enables — mRNA binding
Functional Keywords
Literature and News
- Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis. DOI: 10.1105/tpc.009308 ; PMID: 12671079
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth. DOI: 10.1111/j.1365-313X.2007.03097.x ; PMID: 17470057
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Gene Resources
- UniProt: A0A1P8B527
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B527
- EnsemblPlants: AT4G15640.2
- Gramene: AT4G15640.2
- KEGG: ath:AT4G15640
- Orthologous matrix: QTSFETW
- ExpressionAtlas: AT4G15640
- InterPro: IPR011990
- PANTHER: PTHR47604, PTHR47604:SF1
- Gene3D: 1.25.40.10
- SWISS-MODEL: A0A1P8B527
Sequences
cDNA Sequence
- >AT4G15640.2
ATCATCCCCATCTTTGGAAATGGAGATTTTTTTTGTCCTACGCGAGATAACTTAACTTGTGTAACGTTAGGAAATGTAGCTAGTGAAGGTGATGATCCTGAAAAATTCGAACTTTAGTGTTCCAATTTTAGCTTGTGTCGAGATACGTACTTATCTTTCAATGCCTAGCTTAGGATCAATGGATTGATAGTAGTAGTCACTTGTCCTCTATGAGCTTGTTGATCCCCAGATCGAGCTTTACGTCTGAAGCGGAAAAGCTTGCGGGAAATCCTACAGTGACTGTGAAGGATTTGCATGATAAAATGCTTAATTCTGTAAATGTCAAGAGATCAATGCCTCCAAATGCGTGGTTGTGGCTGTTGATTGAGAACTGTCAGAATCAGGATGATATTCATCTTCTCTTTGACGTTCTTCAGAATCTACGGAGATTTAGATTATCTAATCTTCGTATTCATGACAACTTCAATTGCAATCTATGCCAACAAGTTGCTAAGACTTGTGTACGTGTTGGGGCTATTGACTCTGGAAAGAAGGCTTTGTGGAAACATAATGTTCACGGTTTGACTCCCAGTGTTGCATCTGCACACCATCTTATGTCATATGCACTAGAGCACAAGAATTCTGAACTCATGGAAGAAGTAATGCAACTCCTGAAAACGAATGATCTGCCTCTACAACCCGGTACAGCAGATTTAGTTTTTAGGATCTGTCATGATACAGATAAGTGGGATCTACTAGCCAAGTACTCGAAAAAATTCTCCAAAGCTGGAGTTAAGTTGAGGAAGACCACATTCGATGTGTGGATGGAATTTGCTGCCAAGAGAGGTGATACAGAGTCGCTATGGAAAGTAGATAAACAGAGATCAGAGACATACAGTCAACACACTCTTTCTACTGCCTTTTCTTGTGCAAAGGGTTTCCTACTAGAAAGTAAACCTGAAGAAGCTGCTGCCGTCATCCAGATTATCTGCCAAGCATATCCTGATGAGAAAAAGTCTGCAATTTCGACTGAATTTGAGAAACTTGTAAACGAGTGGCCTGTGGACGTTATCAAGCACCAAACCGACGAAGATAAGAAGGCTCTTGCTGCTTCATTGAAATCTGTGATTCCTTCAATGGTTAATACATTGCTAAGCTCGGGTTTAAAAGTGAGCGTGGATCTGGATGAGTTAAACAAGAACGAAGCTCTTCTCAGCTGAATGGTTGAATCAAGATTTGCAGAATCTCTTGGCGGCTCCACATGAACACATTCTTGTCCAGTTTCTTGCATCCTACGGTAACTCATTTTCTCATTTTGACCTATATGAACAAAACGCCAAGAGTTGTCCTGTTTTGTAAGCCTCAAATAAATTTTACTCTGTTGGACTTTTGTTCTTGATTTGAGTAGTAAAATCCATTTTGTATAAAACAAGAACAATTGAGTATCTTATGATAATGAGACAAAAAGGTTCATTGATTACAACTACTTATCTACTT - >AT4G15640.1
ATCATCCCCATCTTTGGAAATGGAGATTTTTTTTGTCCTACGCGAGATAACTTAACTTGTGTAACGTTAGGAAATGTAGCTAGTGAAGGTGATGATCCTGAAAAATTCGAACTTTAGTGTTCCAATTTTAGCTTGTGTCGAGATACGTACTTATCTTTCAATGCCTAGCTTAGGATCAATGGATTGATAGTAGTAGTCACTTGTCCTCTATGAGCTTGTTGATCCCCAGATCGAGCTTTACGTCTGAAGCGGAAAAGCTTGCGGGAAATCCTACAGTGACTGTGAAGGATTTGCATGATAAAATGCTTAATTCTGTAAATGTCAAGAGATCAATGCCTCCAAATGCGTGGTTGTGGCTGTTGATTGAGAACTGTCAGAATCAGGATGATATTCATCTTCTCTTTGACGTTCTTCAGAATCTACGGAGATTTAGATTATCTAATCTTCGTATTCATGACAACTTCAATTGCAATCTATGCCAACAAGTTGCTAAGACTTGTGTACGTGTTGGGGCTATTGACTCTGGAAAGAAGGCTTTGTGGAAACATAATGTTCACGGTTTGACTCCCAGTGTTGCATCTGCACACCATCTTATGTCATATGCACTAGAGCACAAGAATTCTGAACTCATGGAAGAAGTAATGCAACTCCTGAAAACGAATGATCTGCCTCTACAACCCGGTACAGCAGATTTAGTTTTTAGGATCTGTCATGATACAGATAAGTGGGATCTACTAGCCAAGTACTCGAAAAAATTCTCCAAAGCTGGAGTTAAGTTGAGGAAGACCACATTCGATGTGTGGATGGAATTTGCTGCCAAGAGAGGTGATACAGAGTCGCTATGGAAAGTAGATAAACAGAGATCAGAGACATACAGTCAACACACTCTTTCTACTGCCTTTTCTTGTGCAAAGGGTTTCCTACTAGAAAGTAAACCTGAAGAAGCTGCTGCCGTCATCCAGATTATCTGCCAAGCATATCCTGATGAGAAAAAGTCTGCAATTTCGACTGAATTTGAGAAACTTGTAAACGAGTGGCCTGTGGACGTTATCAAGCACCAAACCGACGAAGATAAGAAGGCTCTTGCTGCTTCATTGAAATCTGTGATTCCTTCAATGGTTAATACATTGCTAAGCTCGGGTTTAAAAGTGAGCGTGGATCTGGATGAGTTAAACAAGAACGAAGCTCTTCTCAGCTGAATGGTTGAATCAAGATTTGCAGAATCTCTTGGCGGCTCCACATGAACACATTCTTGTCCAGTTTCTTGCATCCTACGGTAACTCATTTTCTCATTTTGACCTATATGAACAAAACGCCAAGAGTTGTCCTGTTTTGTAAGCCTCAAATAAATTTTACTCTGTTGGACTTTTGTTCTTGATTTGAGTAGTAAAATCCATTTTGTATAAAACAAGAACAATTGAGTATCTTATGATAATGAGACAAAAAGGTTCATTGATTACAACTACTTATCTACTT
CDS Sequence
- >AT4G15640.2
ATGAGCTTGTTGATCCCCAGATCGAGCTTTACGTCTGAAGCGGAAAAGCTTGCGGGAAATCCTACAGTGACTGTGAAGGATTTGCATGATAAAATGCTTAATTCTGTAAATGTCAAGAGATCAATGCCTCCAAATGCGTGGTTGTGGCTGTTGATTGAGAACTGTCAGAATCAGGATGATATTCATCTTCTCTTTGACGTTCTTCAGAATCTACGGAGATTTAGATTATCTAATCTTCGTATTCATGACAACTTCAATTGCAATCTATGCCAACAAGTTGCTAAGACTTGTGTACGTGTTGGGGCTATTGACTCTGGAAAGAAGGCTTTGTGGAAACATAATGTTCACGGTTTGACTCCCAGTGTTGCATCTGCACACCATCTTATGTCATATGCACTAGAGCACAAGAATTCTGAACTCATGGAAGAAGTAATGCAACTCCTGAAAACGAATGATCTGCCTCTACAACCCGGTACAGCAGATTTAGTTTTTAGGATCTGTCATGATACAGATAAGTGGGATCTACTAGCCAAGTACTCGAAAAAATTCTCCAAAGCTGGAGTTAAGTTGAGGAAGACCACATTCGATGTGTGGATGGAATTTGCTGCCAAGAGAGGTGATACAGAGTCGCTATGGAAAGTAGATAAACAGAGATCAGAGACATACAGTCAACACACTCTTTCTACTGCCTTTTCTTGTGCAAAGGGTTTCCTACTAGAAAGTAAACCTGAAGAAGCTGCTGCCGTCATCCAGATTATCTGCCAAGCATATCCTGATGAGAAAAAGTCTGCAATTTCGACTGAATTTGAGAAACTTGTAAACGAGTGGCCTGTGGACGTTATCAAGCACCAAACCGACGAAGATAAGAAGGCTCTTGCTGCTTCATTGAAATCTGTGATTCCTTCAATGGTTAATACATTGCTAAGCTCGGGTTTAAAAGTGAGCGTGGATCTGGATGAGTTAAACAAGAACGAAGCTCTTCTCAGCTGA - >AT4G15640.1
ATGAGCTTGTTGATCCCCAGATCGAGCTTTACGTCTGAAGCGGAAAAGCTTGCGGGAAATCCTACAGTGACTGTGAAGGATTTGCATGATAAAATGCTTAATTCTGTAAATGTCAAGAGATCAATGCCTCCAAATGCGTGGTTGTGGCTGTTGATTGAGAACTGTCAGAATCAGGATGATATTCATCTTCTCTTTGACGTTCTTCAGAATCTACGGAGATTTAGATTATCTAATCTTCGTATTCATGACAACTTCAATTGCAATCTATGCCAACAAGTTGCTAAGACTTGTGTACGTGTTGGGGCTATTGACTCTGGAAAGAAGGCTTTGTGGAAACATAATGTTCACGGTTTGACTCCCAGTGTTGCATCTGCACACCATCTTATGTCATATGCACTAGAGCACAAGAATTCTGAACTCATGGAAGAAGTAATGCAACTCCTGAAAACGAATGATCTGCCTCTACAACCCGGTACAGCAGATTTAGTTTTTAGGATCTGTCATGATACAGATAAGTGGGATCTACTAGCCAAGTACTCGAAAAAATTCTCCAAAGCTGGAGTTAAGTTGAGGAAGACCACATTCGATGTGTGGATGGAATTTGCTGCCAAGAGAGGTGATACAGAGTCGCTATGGAAAGTAGATAAACAGAGATCAGAGACATACAGTCAACACACTCTTTCTACTGCCTTTTCTTGTGCAAAGGGTTTCCTACTAGAAAGTAAACCTGAAGAAGCTGCTGCCGTCATCCAGATTATCTGCCAAGCATATCCTGATGAGAAAAAGTCTGCAATTTCGACTGAATTTGAGAAACTTGTAAACGAGTGGCCTGTGGACGTTATCAAGCACCAAACCGACGAAGATAAGAAGGCTCTTGCTGCTTCATTGAAATCTGTGATTCCTTCAATGGTTAATACATTGCTAAGCTCGGGTTTAAAAGTGAGCGTGGATCTGGATGAGTTAAACAAGAACGAAGCTCTTCTCAGCTGA
Protein Sequence
- >AT4G15640.2
MSLLIPRSSFTSEAEKLAGNPTVTVKDLHDKMLNSVNVKRSMPPNAWLWLLIENCQNQDDIHLLFDVLQNLRRFRLSNLRIHDNFNCNLCQQVAKTCVRVGAIDSGKKALWKHNVHGLTPSVASAHHLMSYALEHKNSELMEEVMQLLKTNDLPLQPGTADLVFRICHDTDKWDLLAKYSKKFSKAGVKLRKTTFDVWMEFAAKRGDTESLWKVDKQRSETYSQHTLSTAFSCAKGFLLESKPEEAAAVIQIICQAYPDEKKSAISTEFEKLVNEWPVDVIKHQTDEDKKALAASLKSVIPSMVNTLLSSGLKVSVDLDELNKNEALLS - >AT4G15640.1
MSLLIPRSSFTSEAEKLAGNPTVTVKDLHDKMLNSVNVKRSMPPNAWLWLLIENCQNQDDIHLLFDVLQNLRRFRLSNLRIHDNFNCNLCQQVAKTCVRVGAIDSGKKALWKHNVHGLTPSVASAHHLMSYALEHKNSELMEEVMQLLKTNDLPLQPGTADLVFRICHDTDKWDLLAKYSKKFSKAGVKLRKTTFDVWMEFAAKRGDTESLWKVDKQRSETYSQHTLSTAFSCAKGFLLESKPEEAAAVIQIICQAYPDEKKSAISTEFEKLVNEWPVDVIKHQTDEDKKALAASLKSVIPSMVNTLLSSGLKVSVDLDELNKNEALLS