Information report for AT4G15610
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0005886 — located in — plasma membrane
- GO:0015996 — acts upstream of or within — chlorophyll catabolic process
- GO:0014070 — acts upstream of or within — response to organic cyclic compound
- GO:0005802 — located in — trans-Golgi network
- GO:0009755 — acts upstream of or within — hormone-mediated signaling pathway
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0044255 — acts upstream of or within — cellular lipid metabolic process
- GO:0009627 — acts upstream of or within — systemic acquired resistance
- GO:0005794 — located in — Golgi apparatus
- GO:0009966 — acts upstream of or within — regulation of signal transduction
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0032787 — acts upstream of or within — monocarboxylic acid metabolic process
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0005768 — located in — endosome
- GO:0001666 — acts upstream of or within — response to hypoxia
- GO:0010150 — acts upstream of or within — leaf senescence
- GO:1901701 — acts upstream of or within — cellular response to oxygen-containing compound
- GO:0006979 — acts upstream of or within — response to oxidative stress
- GO:0071396 — acts upstream of or within — cellular response to lipid
Functional Keywords
Literature and News
- Global and hormone-induced gene expression changes during shoot development in Arabidopsis. DOI: 10.1105/tpc.006668 ; PMID: 12417700
- Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. DOI: 10.1104/pp.103.020941 ; PMID: 12805589
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance. DOI: 10.1104/pp.104.040444 ; PMID: 15181204
- Cesium toxicity in Arabidopsis. DOI: 10.1104/pp.104.046672 ; PMID: 15489280
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. DOI: 10.1007/s11103-006-9041-y ; PMID: 16941220
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional responses of Arabidopsis thaliana plants to As (V) stress. DOI: 10.1186/1471-2229-8-87 ; PMID: 18684332
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family. DOI: 10.1104/pp.114.239137 ; PMID: 24920445
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
Gene Resources
- UniProt: A0A1P8B7Z3
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B7Z3
- EnsemblPlants: AT4G15610.2
- Gramene: AT4G15610.2
- ExpressionAtlas: AT4G15610
- InterPro: IPR006459, IPR006702, IPR044173
- PANTHER: PTHR36488, PTHR36488:SF8
- OrthoDB: A0A1P8B7Z3
- SWISS-MODEL: A0A1P8B7Z3
Homologs
- Nicotiana benthamiana Niben101Scf00271g08008.1
- Oryza sativa OsCASP2
Sequences
cDNA Sequence
- >AT4G15610.2
GAGAATGCCAGAAGATGAGTCTTACGGATATATATGAACATATTGACTCTTTATGAATTTTCAAATATCTCTGGCGTGTCCAAAACACCCACCAAATTAGTCCCACGACCTAATATTATAATAGTAATAAACATTATTATAGCAATAAAAAAAACTCAATTACTTCTTGCTAACACACACAAAGCCACAATATAAAACCCCCTCTCAACGTACCAAAAATTTCACCACCTCCCCATAACGAAAAATTCATTTCACTTTTCCTATAACAATTCAAGATTAAGCTATGGGTTATGAAACCAAATCGACTTTGGACACCGAGAGATCGACCGCGCCAGGAACCGGCACCACGACGAAGAGTTGTTCGATGACTCAAGTTGTCCTAAGATTTGTTCTGTTTGCAGCCACTTTGACATCAATAGTGGTAATGGTTACAAGTAAACAGACCAAGAATATATTCCTTCCTGGAACTCCCATTCGTATTCCTGCTGCAGAGTTCACCAACTCACCGGCTCTTATGTAAGTTCATCCTAATAATTCATTAATTAATATTTTCTTTTATTTTCTCGAATTTGATTGATCATCTTTAGTAAATGTGACTAAGGGCCAGAGTTCATATGTGATTTGTATATCTCATATATAGTCAAACTAAGTAGACAATATAATTATGGGTTGTTGTGTTGTTTGGAGAAGTAATAGAGGTTGTTTTATCAAACACGGGTCTTAAACCATATCTTAATCCTAACTTAGAAGAAGTCATGTCAAATTAGGATAGTGTAATACAATGATCGCTTGATCGGTCACATGTATGGACCATTGAAAATCTGGTCAGAGCGTGGATTTTTTCATGTATACAAAAATATATATTTAATTTTGAGAAACCAAGAGGATTTTGGTCATGTATATGGAAAAGAGGATGTAGTATCACGTAAATGTTTAAACATATACTTAACAAGTAAAATTTATACATACAAATCGCCGATCTTATATGAATTGTTTATTTACGTGTGGGAGTAGTTGGAATTTCGAAACAAAGGTTGTGGAAAGTCAAAAATACTTTGTGGTAGCATTATCCGTGGCATGCTTTTACAGCATTGTATCTACATTTGTCACCGTATCTGCTTTCAAGAAGCATTCCTGCTCTGCGGTTCTCTTGCTAAATCTTGCCATTATGGATGCGGTGATGGTGGGGATAGTGGCCTCAGCAACCGGGGCAGGAGGTGGAGTAGCTTACCTTGGTCTGAAGGGAAACAAAGAAGTTAGATGGGGCAAAATCTGTCATATCTACGACAAGTTTTGCCGTCATGTTGGAGGAGCAATCGCCGTCTCATTGTTTGCTTCGGTTGTCCTCCTCCTCCTATCCATCATCTCTGTCCTCTCCCTCTACAAGAAAATCCGTTGAGTCACTCTCTTTGTTTCGTTGTTTCTCTCAAGGTAATACAAATTGATGATGTTTTTGTTTTTTTATTTGGTATAATCTGTCGAAGTTGACTTGTATGCGTCTTAGTTCTGTAAGTGTTGTATTATTTAAATTTCGTTGATTTTGTATAATTGTGTGATTAAAGTATTTGTAAACCGAGGTTTCTAGTGAATCTTTGAATTTTATTCAGTGTTTTGTATAATTGTGTGATCGAGCATTCTGACTCGATATCTTTTTGCATTCATAAAGAAAACTATTTTGGTCCAAGATGGCAAAAATAATTGGG - >AT4G15610.1
GAGAATGCCAGAAGATGAGTCTTACGGATATATATGAACATATTGACTCTTTATGAATTTTCAAATATCTCTGGCGTGTCCAAAACACCCACCAAATTAGTCCCACGACCTAATATTATAATAGTAATAAACATTATTATAGCAATAAAAAAAACTCAATTACTTCTTGCTAACACACACAAAGCCACAATATAAAACCCCCTCTCAACGTACCAAAAATTTCACCACCTCCCCATAACGAAAAATTCATTTCACTTTTCCTATAACAATTCAAGATTAAGCTATGGGTTATGAAACCAAATCGACTTTGGACACCGAGAGATCGACCGCGCCAGGAACCGGCACCACGACGAAGAGTTGTTCGATGACTCAAGTTGTCCTAAGATTTGTTCTGTTTGCAGCCACTTTGACATCAATAGTGGTAATGGTTACAAGTAAACAGACCAAGAATATATTCCTTCCTGGAACTCCCATTCGTATTCCTGCTGCAGAGTTCACCAACTCACCGGCTCTTATGTAAGTTCATCCTAATAATTCATTAATTAATATTTTCTTTTATTTTCTCGAATTTGATTGATCATCTTTAGTAAATGTGACTAAGGGCCAGAGTTCATATGTGATTTGTATATCTCATATATAGTCAAACTAAGTAGACAATATAATTATGGGTTGTTGTGTTGTTTGGAGAAGTAATAGAGGTTGTTTTATCAAACACGGGTCTTAAACCATATCTTAATCCTAACTTAGAAGAAGTCATGTCAAATTAGGATAGTGTAATACAATGATCGCTTGATCGGTCACATGTATGGACCATTGAAAATCTGGTCAGAGCGTGGATTTTTTCATGTATACAAAAATATATATTTAATTTTGAGAAACCAAGAGGATTTTGGTCATGTATATGGAAAAGAGGATGTAGTATCACGTAAATGTTTAAACATATACTTAACAAGTAAAATTTATACATACAAATCGCCGATCTTATATGAATTGTTTATTTACGTGTGGGAGTAGTTGGAATTTCGAAACAAAGGTTGTGGAAAGTCAAAAATACTTTGTGGTAGCATTATCCGTGGCATGCTTTTACAGCATTGTATCTACATTTGTCACCGTATCTGCTTTCAAGAAGCATTCCTGCTCTGCGGTTCTCTTGCTAAATCTTGCCATTATGGATGCGGTGATGGTGGGGATAGTGGCCTCAGCAACCGGGGCAGGAGGTGGAGTAGCTTACCTTGGTCTGAAGGGAAACAAAGAAGTTAGATGGGGCAAAATCTGTCATATCTACGACAAGTTTTGCCGTCATGTTGGAGGAGCAATCGCCGTCTCATTGTTTGCTTCGGTTGTCCTCCTCCTCCTATCCATCATCTCTGTCCTCTCCCTCTACAAGAAAATCCGTTGAGTCACTCTCTTTGTTTCGTTGTTTCTCTCAAGGTAATACAAATTGATGATGTTTTTGTTTTTTTATTTGGTATAATCTGTCGAAGTTGACTTGTATGCGTCTTAGTTCTGTAAGTGTTGTATTATTTAAATTTCGTTGATTTTGTATAATTGTGTGATTAAAGTATTTGTAAACCGAGGTTTCTAGTGAATCTTTGAATTTTATTCAGTGTTTTGTATAATTGTGTGATCGAGCATTCTGACTCGATATCTTTTTGCATTCATAAAGAAAACTATTTTGGTCCAAGATGGCAAAAATAATTGGG
CDS Sequence
- >AT4G15610.2
ATGAATTGTTTATTTACGTGTGGGAGTAGTTGGAATTTCGAAACAAAGGTTGTGGAAAGTCAAAAATACTTTGTGGTAGCATTATCCGTGGCATGCTTTTACAGCATTGTATCTACATTTGTCACCGTATCTGCTTTCAAGAAGCATTCCTGCTCTGCGGTTCTCTTGCTAAATCTTGCCATTATGGATGCGGTGATGGTGGGGATAGTGGCCTCAGCAACCGGGGCAGGAGGTGGAGTAGCTTACCTTGGTCTGAAGGGAAACAAAGAAGTTAGATGGGGCAAAATCTGTCATATCTACGACAAGTTTTGCCGTCATGTTGGAGGAGCAATCGCCGTCTCATTGTTTGCTTCGGTTGTCCTCCTCCTCCTATCCATCATCTCTGTCCTCTCCCTCTACAAGAAAATCCGTTGA - >AT4G15610.1
ATGAATTGTTTATTTACGTGTGGGAGTAGTTGGAATTTCGAAACAAAGGTTGTGGAAAGTCAAAAATACTTTGTGGTAGCATTATCCGTGGCATGCTTTTACAGCATTGTATCTACATTTGTCACCGTATCTGCTTTCAAGAAGCATTCCTGCTCTGCGGTTCTCTTGCTAAATCTTGCCATTATGGATGCGGTGATGGTGGGGATAGTGGCCTCAGCAACCGGGGCAGGAGGTGGAGTAGCTTACCTTGGTCTGAAGGGAAACAAAGAAGTTAGATGGGGCAAAATCTGTCATATCTACGACAAGTTTTGCCGTCATGTTGGAGGAGCAATCGCCGTCTCATTGTTTGCTTCGGTTGTCCTCCTCCTCCTATCCATCATCTCTGTCCTCTCCCTCTACAAGAAAATCCGTTGA
Protein Sequence
- >AT4G15610.2
MNCLFTCGSSWNFETKVVESQKYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR - >AT4G15610.1
MNCLFTCGSSWNFETKVVESQKYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR