Gene Details:

• Gene ID: AT4G15560
• Gene Symbol: AtCLA1, CLA, CLA1, DEF, DXPS2, DXS, DXS1
• Gene Name: CLOROPLASTOS ALTERADOS 1, 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2, 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE, 1-deoxy-D-xylulose 5-phosphate (DXP) synthase 1
• Description: Deoxyxylulose-5-phosphate synthase;(source:Araport11)
• TAIR Accession: locus:2130374
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G15560.1

Plant Ontology Annotations:

• PO:0000282  — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
• PO:0005679  — plant epidermis — dermal tissue (exact), epidermal layer (exact), epidermides (exact, plural), epidermis (Spanish, exact), epidermises (exact, plural), portion of epidermal tissue (exact), 表皮 (Japanese, exact), multiseriate epidermis (related)
• PO:0009001  — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009073  — stigma — estigma (Spanish, exact), stigmas (exact, plural), stigmata (exact, plural), 柱頭 (Japanese, exact), Poaceae stigma (narrow), Zea stigma (narrow)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)

Gene Ontology:

• GO:0009507  — located in — chloroplast
• GO:0015995  — acts upstream of or within — chlorophyll biosynthetic process
• GO:0052865  — involved in — 1-deoxy-D-xylulose 5-phosphate biosynthetic process
• GO:0019288  — acts upstream of or within — isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
• GO:0005515  — enables — protein binding
• GO:0015995  — involved in — chlorophyll biosynthetic process
• GO:0008661  — enables — 1-deoxy-D-xylulose-5-phosphate synthase activity
• GO:0016114  — involved in — terpenoid biosynthetic process
• GO:0042802  — enables — identical protein binding
• GO:0009507  — is active in — chloroplast
• GO:0016744  — enables — transketolase or transaldolase activity

Function-related keywords:

• trichome ,  plant epidermis ,  fruit ,  root ,  vascular leaf ,  stamen ,  carpel ,  sepal ,  petal ,  flower ,  stigma ,  cotyledon ,  hypocotyl ,  root

Literature:

• Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.   DOI:  10.1023/a:1023005504702 ;  PMID:  12777052
• Evolution of the isoprene biosynthetic pathway in kudzu.   DOI:  10.1104/pp.104.054445 ;  PMID:  15653811
• The Arabidopsis IspH homolog is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis.   DOI:  10.1104/pp.104.058735 ;  PMID:  15863698
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• The plastidial MEP pathway: unified nomenclature and resources.   DOI:  10.1016/j.tplants.2008.09.003 ;  PMID:  18948055
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• Shedding light on the methylerythritol phosphate (MEP)-pathway: long hypocotyl 5 (HY5)/phytochrome-interacting factors (PIFs) transcription factors modulating key limiting steps.   DOI:  10.1111/tpj.14071 ;  PMID:  30144333
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequences: