Gene Details:

• Gene ID: AT4G15510
• Gene Symbol: PPD1
• Gene Name: PsbP-Domain Protein1
• Description: Photosystem II reaction center PsbP family protein;(source:Araport11)
• TAIR Accession: locus:2130295
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G15510.1     AT4G15510.2     AT4G15510.3     AT4G15510.5     AT4G15510.4

Gene Ontology:

• GO:0009570  — located in — chloroplast stroma
• GO:0009654  — part of — photosystem II oxygen evolving complex
• GO:0009543  — located in — chloroplast thylakoid lumen
• GO:0009579  — located in — thylakoid
• GO:0009507  — located in — chloroplast
• GO:0005515  — enables — protein binding
• GO:0048564  — acts upstream of or within — photosystem I assembly
• GO:0009535  — located in — chloroplast thylakoid membrane
• GO:0019898  — located in — extrinsic component of membrane
• GO:0005509  — enables — calcium ion binding
• GO:0031977  — located in — thylakoid lumen

Literature:

• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings.   DOI:  10.5483/bmbrep.2005.38.6.650 ;  PMID:  16336779
• Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis.   DOI:  10.1104/pp.105.070508 ;  PMID:  16500996
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Distinct functions for the two PsbP-like proteins PPL1 and PPL2 in the chloroplast thylakoid lumen of Arabidopsis.   DOI:  10.1104/pp.107.105866 ;  PMID:  17827269
• Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes.   DOI:  10.1186/1471-2164-9-113 ;  PMID:  18315867
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Natural variation in Arabidopsis thaliana rosette area unveils new genes involved in plant development.   DOI:  10.1038/s41598-020-74723-4 ;  PMID:  33077802
• Proteome map of the chloroplast lumen of Arabidopsis thaliana.   DOI:  10.1074/jbc.M108575200 ;  PMID:  11719511
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database.   DOI:  10.1105/tpc.017814 ;  PMID:  14729914
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study.   DOI:  10.1104/pp.106.080150 ;  PMID:  16648217
• Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.   DOI:  10.1021/pr060525b ;  PMID:  17432890
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: