Information report for AT4G15475
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0010225 — acts upstream of or within — response to UV-C
- GO:0005634 — colocalizes with — nucleus
- GO:0003674 — enables — molecular_function
- GO:0005737 — located in — cytoplasm
- GO:0006511 — acts upstream of or within — ubiquitin-dependent protein catabolic process
- GO:0006289 — acts upstream of or within — nucleotide-excision repair
- GO:0031146 — involved in — SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
- GO:0019005 — part of — SCF ubiquitin ligase complex
Functional Keywords
Literature and News
- F-box proteins in Arabidopsis. DOI: 10.1016/s1360-1385(00)01769-6 ; PMID: 11077244
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- RAD7 homologues contribute to Arabidopsis UV tolerance. DOI: 10.1016/j.plantsci.2018.09.017 ; PMID: 30466592
- F-box proteins in Arabidopsis. DOI: 10.1016/s1360-1385(00)01769-6 ; PMID: 11077244
- Protein degradation in signaling. DOI: 10.1016/s1369-5266(00)00100-x ; PMID: 11019805
Gene Resources
- UniProt: A0A178V1R5
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178V1R5
- ExpressionAtlas: AT4G15475
- InterPro: IPR001611, IPR001810, IPR006553
- PANTHER: PTHR13318, PTHR13318:SF95
- SUPFAM: SSF52047, SSF81383
- Gene3D: 1.20.1280.50, 3.80.10.10
- Conserved Domain Database: cd22159
Homologs
- Glycine max GmEBF1
- Juglans regia Jr11_03580
- Manihot esculenta Manes.04G162700
- Oryza sativa LOC_Os12g01760
- Ricinus communis 30131.t000410
Sequences
cDNA Sequence
- >AT4G15475.1
CTTTGCTCTCCTTTTTTTTTAAACTCAACCATACACAAAAAAAGCGACCTCATCTTACCCACCGATCCGCCATTACAGACGAAGAAGAATTTCAACTGCAATCTCTCTCTGAACCATGAGAGGTCACGATCGGATTAACAATTGTTTGCCGGAGGAACTTATCCTCGAGATATTCCGGCGACTTGAATCGAAACCGAATCGCGACGCATGCTCCCTCGTCTGCAAGCGATGGTTATCTCTCGAGCGATTTAGCCGCACCACGCTTCGTATCGGCGCTTCGTTTTCTCCCGACGACTTCATCTCCCTCCTATCTCGTCGCTTTCTCTATATTACCTCTATCCATGTCGACGAACGTATCTCCGTCTCCCTTCCTTCCCTCTCTCCTTCCCCAAAAAGAAAACGTGGGAGGGACAGTTCGTCGCCATCGTCGAGTAAGCGGAAGAAATTGACTGATAAGACACATTCTGGAGCTGAGAACGTCGAGTCTTCCAGCTTGACTGATACGGGCTTGACTGCTCTAGCGAATGGATTTCCAAGAATAGAAAACTTGAGCTTGATATGGTGCCCTAACGTTTCAAGTGTGGGTTTGTGTTCCCTTGCTCAGAAATGCACTTCACTTAAATCTCTTGATTTACAGGGTTGCTATGTTGGAGATCAAGGCTTAGCAGCTGTTGGAAAGTTTTGTAAGCAACTTGAAGAACTAAATTTGCGCTTTTGCGAAGGCTTAACTGATGTTGGAGTTATTGATCTTGTTGTTGGTTGTTCCAAGTCTTTAAAGTCTATCGGTGTTGCTGCGTCAGCAAAAATAACAGATTTATCTCTGGAAGCAGTTGGTTCTCACTGTAAATTACTAGAAGTTTTGTATTTGGATTCTGAATACATCCATGATAAAGGATTGATAGCGGTGGCTCAGGGATGCCACCGTTTGAAAAATCTGAAGCTTCAATGTGTTAGTGTGACGGATGTGGCTTTTGCTGCAGTGGGAGAGTTGTGTACTTCGTTGGAGCGATTGGCATTGTATAGCTTTCAGCATTTTACTGACAAGGGCATGCGAGCCATCGGTAAAGGGTCTAAGAAGTTGAAAGATCTTACTTTAAGTGATTGTTACTTTGTGAGTTGCAAAGGTTTAGAAGCTATTGCTCATGGTTGTAAGGAACTTGAGCGTGTGGAAATTAACGGATGCCACAACATTGGTACACGTGGAATAGAGGCAATTGGAAAATCTTGCCCGCGCCTCAAAGAGTTAGCTTTGTTGTATTGCCAAAGGATTGGTAATTCGGCTCTTCAAGAAATTGGAAAAGGCTGTAAATCCCTAGAAATACTTCACTTAGTAGACTGCTCTGGCATTGGAGACATCGCTATGTGCAGTATTGCTAAAGGCTGTCGCAACCTCAAGAAACTTCATATCCGCAGATGCTATGAGATAGGAAACAAAGGAATTATATCTATTGGAAAGCATTGCAAATCACTAACCGAGCTTAGTCTCCGGTTTTGCGATAAAGTTGGAAATAAAGCATTAATCGCCATTGGAAAAGGTTGCTCCTTACAACAACTAAACGTAAGTGGTTGTAATCAAATCAGCGATGCTGGAATAACAGCAATCGCCAGAGGCTGTCCTCAACTCACTCACCTCGACATTAGTGTTCTTCAGAACATTGGAGACATGCCGTTGGCTGAGCTTGGAGAAGGATGTCCAATGCTGAAAGACTTGGTCTTGTCTCATTGCCACCATATAACAGACAATGGTCTGAACCATCTTGTACAGAAGTGCAAACTTCTGGAGACTTGTCACATGGTTTACTGCCCAGGGATCACTTCCGCTGGAGTGGCTACAGTCGTCTCGAGCTGTCCACACATCAAAAAGGTGTTGATAGAGAAATGGAAAGTGACTGAGAGGACGACAAGGAGAGCTGGATCGGTTATCTCTTATCTATGCATGGATCTCTAGATCGTAATTTCAAGGTCAGTTTCTAAGATTTATGTTTATGTTTTCTTAATAAAAGTAATAACTTATAGTCCAAACTTATGGTGAGTCATGGTTGTTTATTGTATGTTTATGTGAACTGGTTGTACATGGATGAAAACTTTGTCGGGATACAAACATGTGCCGAAGCCG
CDS Sequence
- >AT4G15475.1
ATGAGAGGTCACGATCGGATTAACAATTGTTTGCCGGAGGAACTTATCCTCGAGATATTCCGGCGACTTGAATCGAAACCGAATCGCGACGCATGCTCCCTCGTCTGCAAGCGATGGTTATCTCTCGAGCGATTTAGCCGCACCACGCTTCGTATCGGCGCTTCGTTTTCTCCCGACGACTTCATCTCCCTCCTATCTCGTCGCTTTCTCTATATTACCTCTATCCATGTCGACGAACGTATCTCCGTCTCCCTTCCTTCCCTCTCTCCTTCCCCAAAAAGAAAACGTGGGAGGGACAGTTCGTCGCCATCGTCGAGTAAGCGGAAGAAATTGACTGATAAGACACATTCTGGAGCTGAGAACGTCGAGTCTTCCAGCTTGACTGATACGGGCTTGACTGCTCTAGCGAATGGATTTCCAAGAATAGAAAACTTGAGCTTGATATGGTGCCCTAACGTTTCAAGTGTGGGTTTGTGTTCCCTTGCTCAGAAATGCACTTCACTTAAATCTCTTGATTTACAGGGTTGCTATGTTGGAGATCAAGGCTTAGCAGCTGTTGGAAAGTTTTGTAAGCAACTTGAAGAACTAAATTTGCGCTTTTGCGAAGGCTTAACTGATGTTGGAGTTATTGATCTTGTTGTTGGTTGTTCCAAGTCTTTAAAGTCTATCGGTGTTGCTGCGTCAGCAAAAATAACAGATTTATCTCTGGAAGCAGTTGGTTCTCACTGTAAATTACTAGAAGTTTTGTATTTGGATTCTGAATACATCCATGATAAAGGATTGATAGCGGTGGCTCAGGGATGCCACCGTTTGAAAAATCTGAAGCTTCAATGTGTTAGTGTGACGGATGTGGCTTTTGCTGCAGTGGGAGAGTTGTGTACTTCGTTGGAGCGATTGGCATTGTATAGCTTTCAGCATTTTACTGACAAGGGCATGCGAGCCATCGGTAAAGGGTCTAAGAAGTTGAAAGATCTTACTTTAAGTGATTGTTACTTTGTGAGTTGCAAAGGTTTAGAAGCTATTGCTCATGGTTGTAAGGAACTTGAGCGTGTGGAAATTAACGGATGCCACAACATTGGTACACGTGGAATAGAGGCAATTGGAAAATCTTGCCCGCGCCTCAAAGAGTTAGCTTTGTTGTATTGCCAAAGGATTGGTAATTCGGCTCTTCAAGAAATTGGAAAAGGCTGTAAATCCCTAGAAATACTTCACTTAGTAGACTGCTCTGGCATTGGAGACATCGCTATGTGCAGTATTGCTAAAGGCTGTCGCAACCTCAAGAAACTTCATATCCGCAGATGCTATGAGATAGGAAACAAAGGAATTATATCTATTGGAAAGCATTGCAAATCACTAACCGAGCTTAGTCTCCGGTTTTGCGATAAAGTTGGAAATAAAGCATTAATCGCCATTGGAAAAGGTTGCTCCTTACAACAACTAAACGTAAGTGGTTGTAATCAAATCAGCGATGCTGGAATAACAGCAATCGCCAGAGGCTGTCCTCAACTCACTCACCTCGACATTAGTGTTCTTCAGAACATTGGAGACATGCCGTTGGCTGAGCTTGGAGAAGGATGTCCAATGCTGAAAGACTTGGTCTTGTCTCATTGCCACCATATAACAGACAATGGTCTGAACCATCTTGTACAGAAGTGCAAACTTCTGGAGACTTGTCACATGGTTTACTGCCCAGGGATCACTTCCGCTGGAGTGGCTACAGTCGTCTCGAGCTGTCCACACATCAAAAAGGTGTTGATAGAGAAATGGAAAGTGACTGAGAGGACGACAAGGAGAGCTGGATCGGTTATCTCTTATCTATGCATGGATCTCTAG
Protein Sequence
- >AT4G15475.1
MRGHDRINNCLPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFLYITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLIEKWKVTERTTRRAGSVISYLCMDL