Information report for AT3G51080
Gene Details
|
|
Functional Descriptions
- GO:0045893 — involved in — positive regulation of DNA-templated transcription
- GO:0008270 — enables — zinc ion binding
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0030154 — involved in — cell differentiation
- GO:0009416 — acts upstream of or within — response to light stimulus
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens. DOI: 10.1104/pp.106.082073 ; PMID: 16998091
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A178VKT0
- EMBL: LR881468, LUHQ01000003
- AlphaFoldDB: A0A178VKT0
- EnsemblPlants: AT3G51080.1
- Gramene: AT3G51080.1
- KEGG: ath:AT3G51080
- Orthologous matrix: RVWSFNG
- ExpressionAtlas: AT3G51080
- InterPro: IPR000679, IPR013088, IPR016679
- PANTHER: PTHR45658, PTHR45658:SF74
- SUPFAM: SSF57716
- PROSITE: PS00344, PS50114
- Gene3D: 3.30.50.10
- SWISS-MODEL: A0A178VKT0
- Conserved Domain Database: cd00202
Homologs
- Brassica napus GSBRNA2T00041722001, GSBRNA2T00054075001, GSBRNA2T00035391001, GSBRNA2T00151323001, GSBRNA2T00134978001
- Brassica oleracea XP_013595504.1, XP_013595503.1, XP_013595502.1, XP_013619181.1, XP_013607036.1, XP_013607035.1, XP_013607034.1
- Brassica rapa XP_009136583.1, XP_009149301.1, XP_009149294.1
Sequences
cDNA Sequence
- >AT3G51080.1
TTTTGGTTCTTGGGAAAATAAGAGATTGAGAAAGAATAAAGAAGAGAAACTCACAACTTTTTTAGTTTTAGGAGAAGAGGGCTTTGGTCTGGAGTCACTATCATATTCAATGCTTTACCAAACTCACCTCTTCTTCTAAATTCTCACCACTCTTCTTCTTCTTCTCATTCACCGACATATCTCCTCTCTTCACTCTCTGTCTCTTCTCATCTCAGGAAATAATGGAGAGTGTTGAATTGACGTTGAAGAACAGTAACATGAAAGACAAAACCCTAACCGGCGGCGCTCAAAATGGCGATGATTTCTCCGTCGACGACTTGCTTGACTTCTCAAAAGAAGAAGAAGACGACGACGTTTTGGTTGAGGATGAGGCTGAATTGAAAGTACAACGAAAAAGAGGAGTCTCTGACGAAAATACCCTTCACCGGAGCAACGATTTCTCCACCGCTGATTTCCACACTAGCGGGCTTTCCGTTCCGATGGATGATATAGCGGAACTTGAATGGTTATCAAATTTCGTAGATGATTCTTCTTTCACGCCGTATTCTGCTCCGACGAATAAACCGGTTTGGTTAACCGGAAATCGGAGACATCTTGTACAACCGGTTAAAGAGGAGACCTGCTTCAAATCCCAACATCCGGCCGTCAAAACCAGACCCAAACGAGCCAGAACCGGAGTCAGAGTCTGGTCTCATGGTTCGCAGTCGTTAACCGACTCATCTTCAAGCTCTACAACATCTTCGTCGTCCTCTCCTCGTCCTTCAAGCCCTCTATGGCTCGCCAGCGGTCAGTTTCTTGATGAGCCAATGACTAAAACACAAAAGAAGAAGAAAGTTTGGAAAAACGCTGGTCAGACGCAAACGCAAACGCAGACGCAGACGCGGCAGTGTGGTCATTGTGGAGTTCAGAAAACGCCGCAGTGGAGAGCAGGACCATTAGGAGCGAAGACGTTGTGTAATGCGTGTGGTGTGCGTTACAAATCGGGTCGGTTACTACCCGAATATAGACCCGCTTGTAGCCCAACATTTTCGAGTGAGCTTCACTCAAACCACCACAGTAAAGTCATTGAGATGCGTAGGAAGAAAGAGACTTCTGACGGTGCTGAAGAAACCGGTTTGAACCAGCCGGTTCAGACGGTTCAGGTTGTCTCGAGTTTTTGAAGAAATTGTGGAAGGTTTTTAAAGGAGCAGAATTAGGATCCGACCCGGTTCAGATTTATCACCAGTTAGTATGTTAACGGGTTATGTATGTTTTAAATTACAAATTTGATTTTTTGTTTGTTAGTCGTAGTAGGTTTTTAGATTTAGTAACTGGTTAAAACTTTTAAAACTCTTACTATTATATTTGTTTTGTTTCGCATTAATTTTCAGAATTCTTTTTTTCT
CDS Sequence
- >AT3G51080.1
ATGGAGAGTGTTGAATTGACGTTGAAGAACAGTAACATGAAAGACAAAACCCTAACCGGCGGCGCTCAAAATGGCGATGATTTCTCCGTCGACGACTTGCTTGACTTCTCAAAAGAAGAAGAAGACGACGACGTTTTGGTTGAGGATGAGGCTGAATTGAAAGTACAACGAAAAAGAGGAGTCTCTGACGAAAATACCCTTCACCGGAGCAACGATTTCTCCACCGCTGATTTCCACACTAGCGGGCTTTCCGTTCCGATGGATGATATAGCGGAACTTGAATGGTTATCAAATTTCGTAGATGATTCTTCTTTCACGCCGTATTCTGCTCCGACGAATAAACCGGTTTGGTTAACCGGAAATCGGAGACATCTTGTACAACCGGTTAAAGAGGAGACCTGCTTCAAATCCCAACATCCGGCCGTCAAAACCAGACCCAAACGAGCCAGAACCGGAGTCAGAGTCTGGTCTCATGGTTCGCAGTCGTTAACCGACTCATCTTCAAGCTCTACAACATCTTCGTCGTCCTCTCCTCGTCCTTCAAGCCCTCTATGGCTCGCCAGCGGTCAGTTTCTTGATGAGCCAATGACTAAAACACAAAAGAAGAAGAAAGTTTGGAAAAACGCTGGTCAGACGCAAACGCAAACGCAGACGCAGACGCGGCAGTGTGGTCATTGTGGAGTTCAGAAAACGCCGCAGTGGAGAGCAGGACCATTAGGAGCGAAGACGTTGTGTAATGCGTGTGGTGTGCGTTACAAATCGGGTCGGTTACTACCCGAATATAGACCCGCTTGTAGCCCAACATTTTCGAGTGAGCTTCACTCAAACCACCACAGTAAAGTCATTGAGATGCGTAGGAAGAAAGAGACTTCTGACGGTGCTGAAGAAACCGGTTTGAACCAGCCGGTTCAGACGGTTCAGGTTGTCTCGAGTTTTTGA
Protein Sequence
- >AT3G51080.1
MESVELTLKNSNMKDKTLTGGAQNGDDFSVDDLLDFSKEEEDDDVLVEDEAELKVQRKRGVSDENTLHRSNDFSTADFHTSGLSVPMDDIAELEWLSNFVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEETCFKSQHPAVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLDEPMTKTQKKKKVWKNAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQPVQTVQVVSSF