AT3G51050

Gene Details

Gene ID: AT3G51050
Gene Symbol: NERD1
Gene Name: NEW ENHANCER of ROOT DWARFISM1
Description: FG-GAP repeat-containing protein;(source:Araport11)
TAIR Accession: locus:2080988
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

GO:0010584 — involved in — pollen exine formation
GO:0005783 — located in — endoplasmic reticulum
GO:0005794 — located in — Golgi apparatus
GO:0009826 — acts upstream of or within — unidimensional cell growth
GO:0000325 — located in — plant-type vacuole
GO:0005794 — colocalizes with — Golgi apparatus
GO:0003674 — enables — molecular_function
GO:0048364 — acts upstream of or within — root development
GO:0005739 — located in — mitochondrion

SALK_018060C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:increased,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
nerd1-1 — Short primary roots.Increased root hair length.
nerd1-1/sec8-6 — Short roots. abnormal root hairs.
nerd1-2 — Slightly dwarf plant,reduced rosette leaf size, delayed bolting for about 10 days,completely male sterile.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT3G51050.1
GTTCGGTCAAAGAGAACAAAAACGTCAGGATGTTATTCTATTAAACGTCTGATATATCTATACGGCGTAGTTTTGAAGTTGTCGACTATTCTTCATCGTTCTCTCTGCTCTGGTAAGGAGATTGCTGCTACCTACTGATGCAAATCTGCCATTGATACATCTGCTTGCGGTTAGGGCAAAGATGAGGAAACGCGATTTGGCTATTTTGATGCTCTCTGGATTTGCTATATTCTTCACTCTTCAGCACGAGGGTGATTTTGCGTTCAAAGAAGCATGGTTTCATTTGTATGATGAATACCCAGTCAAATACGAAGCTGATCGTCTCCCACCACCTATTGTAGCTGATCTTAATGGTGATGGAAAGAAGGAGGTTCTCGTTGCTACTAATGATGCCAAAATTCAGGTTCTGGAGCCTCATTCCAGGCGTGTGGATGAAGGTTTTAGTGAAGCACGTGTTCTTGCGGAAATCACTCTTTTGCCTGACAAGATCCGTGTTGCGTCAGGGAGACGTGCTGTGGCCATGGCCACAGGTGTTATTGATAGGTACTATAAAAATGGAACTCCCCAGAAGCAGGTTGTGGTCGTTGTTACCTCAGGTTGGTCTGTGCTCTGCTTTGATCACAACCTGAAAAAGCTGTGGGAAACGAATCTGCAGGAGGATTTCCCACATAATGCACACCATAGAGAGATAGCAATTTCGATAAGCAATTACACATTGAAGCATGGTGATACGGGTTTGGTTATTGTTGGTGGACGGATGGAGATGCAGCCATATAATCACATGGACCCATTTGAGGAACTTGGCATGACAGCACAAAATGCTGATCAACACAGAAGAAGTGCTACTGAGAATCAGGCCTCTGAAGATTCTGGAGCCATAAACTTGCGTCACTTTTCTGTCTATGCATTTGCTGGCAAGACTGGCCTTCTTCGATGGAGTAAAAAGACTGATGATGTTGAAGCTCACACCTCAGATGCATCACAATTAATTCCACAACACAATTACAAGCTTGATGTGCATGCTCTAAATAGCCGTCACCCAGGAGAGTTTGAGTGCAGGGAATTTAGAGAATCAATTCTTAGTGTCATGCCCCATCGCTGGGACCGACGTGAAGATACATTATTGAAGCTTGCTCATTTCAGGCGACACAAGAGGAAAACATTGAAGAAGCAGGCTGGTAGTAAGTCTACAGCTTATCCGTTTCACAAACCTGAGGAACACACACCCGCTGGAAAGGACTTGTCAAGAAAGATTCCAAAATTGATTGGAAAGGCTGCACGCTATGCTGGCTCGGCAAAACCCAAGAAGGGTATGCAATACATTCCGACGATAACTAATTACACGAAGCTTTGGTGGGTTCCTAATGTTGTTGTGGCTCATCAAAAGGAAGGAATTGAAGCTATTCATTTGCCTACTGGTCGAACACTTTGCAAGCTTTCTCTACTTGAAGGTGGACTTCACGCCGACATAAACGGAGATGGTGTTCTCGATCATGTCCAGACTGTCGGAGGCAATGTTGGAGAGAGAACTGTAGTGAGCGGGTCAATGGAAGTGTTGAAGCCTTGCTGGGCAGTGGCAACCTCAGGCGTTCCCATCCGGGAACAGCTCTTTAACGTCTCGATCTGCCATCACTCCCCTTTTAACTTCTTGCACTATGGAGGAGATTACTCACGACACTTCGCCCAGGCAAGAGACACCTCTACTCTGGAGATCGCAACTCCCATTCTCATCCCCAGAGATGATGGACACAAACACCGCAAAGGCAGTCACGGAGATGTAATCTTCTTGACAAACCGTGGAGAGGTGACATCATACACGCCTGATGTGCACGGCCACGACGCAGTCTGGCAATGGCAGCTTCAGACAGAAGCCACATGGTCGAATCTCCCGTCTCCATCGGGTTTAACTGAATCAGGGACGGTGGTCCCAACCCTGAAACCATTCTCGTTGCGCATTCATGATAACCAGCCTATGATCCTTGCCGGGGGAGATCAAGCAGCGGTCATCATCTCTCCGGGAGGAAGCATATTGGCTTCCATCGAATTACCGTCTCAACCGACTCATGCACTTATCACTGATGACTTCTCGAACGATGGTCTAACGGATGTGATTGTGATGACCTCAAATGGGGTTTACGGGTTTGTTCAAACCAGACAGCCAGGGGCTCTGTTCTTCAGTTCGTTGGTGGGTTGTCTCTTAGTAGTTATGGCAGTTATTTTCGTTACTCAGCACTTAAACTCCATTCAAGGTAAGCCTCGACCATCATCTAGCTTTTAATAGAAATCTCGTAGAGTTTTCTTCCTCTCTACGGAAGTTAAACCGGCAGGTCCGCTTTAGCAGCTTCACCCACATCGGTTTTGGTAAACCGGAAATATTACTGATATACCAGTGTAGATTCAGTGCCTTATTTCCTGGTTTCAGCTGTATAACTTTATACTTTGTAGAATTCAAGTAAAAAATGGTAGAGGCAAATAGAGGACTTTATGTTTTTGTCAATTTTGATGTTTTAATGGAATTATGTGACATTTAATTTATAAAAAAA

CDS Sequence

>AT3G51050.1
ATGAGGAAACGCGATTTGGCTATTTTGATGCTCTCTGGATTTGCTATATTCTTCACTCTTCAGCACGAGGGTGATTTTGCGTTCAAAGAAGCATGGTTTCATTTGTATGATGAATACCCAGTCAAATACGAAGCTGATCGTCTCCCACCACCTATTGTAGCTGATCTTAATGGTGATGGAAAGAAGGAGGTTCTCGTTGCTACTAATGATGCCAAAATTCAGGTTCTGGAGCCTCATTCCAGGCGTGTGGATGAAGGTTTTAGTGAAGCACGTGTTCTTGCGGAAATCACTCTTTTGCCTGACAAGATCCGTGTTGCGTCAGGGAGACGTGCTGTGGCCATGGCCACAGGTGTTATTGATAGGTACTATAAAAATGGAACTCCCCAGAAGCAGGTTGTGGTCGTTGTTACCTCAGGTTGGTCTGTGCTCTGCTTTGATCACAACCTGAAAAAGCTGTGGGAAACGAATCTGCAGGAGGATTTCCCACATAATGCACACCATAGAGAGATAGCAATTTCGATAAGCAATTACACATTGAAGCATGGTGATACGGGTTTGGTTATTGTTGGTGGACGGATGGAGATGCAGCCATATAATCACATGGACCCATTTGAGGAACTTGGCATGACAGCACAAAATGCTGATCAACACAGAAGAAGTGCTACTGAGAATCAGGCCTCTGAAGATTCTGGAGCCATAAACTTGCGTCACTTTTCTGTCTATGCATTTGCTGGCAAGACTGGCCTTCTTCGATGGAGTAAAAAGACTGATGATGTTGAAGCTCACACCTCAGATGCATCACAATTAATTCCACAACACAATTACAAGCTTGATGTGCATGCTCTAAATAGCCGTCACCCAGGAGAGTTTGAGTGCAGGGAATTTAGAGAATCAATTCTTAGTGTCATGCCCCATCGCTGGGACCGACGTGAAGATACATTATTGAAGCTTGCTCATTTCAGGCGACACAAGAGGAAAACATTGAAGAAGCAGGCTGGTAGTAAGTCTACAGCTTATCCGTTTCACAAACCTGAGGAACACACACCCGCTGGAAAGGACTTGTCAAGAAAGATTCCAAAATTGATTGGAAAGGCTGCACGCTATGCTGGCTCGGCAAAACCCAAGAAGGGTATGCAATACATTCCGACGATAACTAATTACACGAAGCTTTGGTGGGTTCCTAATGTTGTTGTGGCTCATCAAAAGGAAGGAATTGAAGCTATTCATTTGCCTACTGGTCGAACACTTTGCAAGCTTTCTCTACTTGAAGGTGGACTTCACGCCGACATAAACGGAGATGGTGTTCTCGATCATGTCCAGACTGTCGGAGGCAATGTTGGAGAGAGAACTGTAGTGAGCGGGTCAATGGAAGTGTTGAAGCCTTGCTGGGCAGTGGCAACCTCAGGCGTTCCCATCCGGGAACAGCTCTTTAACGTCTCGATCTGCCATCACTCCCCTTTTAACTTCTTGCACTATGGAGGAGATTACTCACGACACTTCGCCCAGGCAAGAGACACCTCTACTCTGGAGATCGCAACTCCCATTCTCATCCCCAGAGATGATGGACACAAACACCGCAAAGGCAGTCACGGAGATGTAATCTTCTTGACAAACCGTGGAGAGGTGACATCATACACGCCTGATGTGCACGGCCACGACGCAGTCTGGCAATGGCAGCTTCAGACAGAAGCCACATGGTCGAATCTCCCGTCTCCATCGGGTTTAACTGAATCAGGGACGGTGGTCCCAACCCTGAAACCATTCTCGTTGCGCATTCATGATAACCAGCCTATGATCCTTGCCGGGGGAGATCAAGCAGCGGTCATCATCTCTCCGGGAGGAAGCATATTGGCTTCCATCGAATTACCGTCTCAACCGACTCATGCACTTATCACTGATGACTTCTCGAACGATGGTCTAACGGATGTGATTGTGATGACCTCAAATGGGGTTTACGGGTTTGTTCAAACCAGACAGCCAGGGGCTCTGTTCTTCAGTTCGTTGGTGGGTTGTCTCTTAGTAGTTATGGCAGTTATTTTCGTTACTCAGCACTTAAACTCCATTCAAGGTAAGCCTCGACCATCATCTAGCTTTTAA

Protein Sequence

>AT3G51050.1
MRKRDLAILMLSGFAIFFTLQHEGDFAFKEAWFHLYDEYPVKYEADRLPPPIVADLNGDGKKEVLVATNDAKIQVLEPHSRRVDEGFSEARVLAEITLLPDKIRVASGRRAVAMATGVIDRYYKNGTPQKQVVVVVTSGWSVLCFDHNLKKLWETNLQEDFPHNAHHREIAISISNYTLKHGDTGLVIVGGRMEMQPYNHMDPFEELGMTAQNADQHRRSATENQASEDSGAINLRHFSVYAFAGKTGLLRWSKKTDDVEAHTSDASQLIPQHNYKLDVHALNSRHPGEFECREFRESILSVMPHRWDRREDTLLKLAHFRRHKRKTLKKQAGSKSTAYPFHKPEEHTPAGKDLSRKIPKLIGKAARYAGSAKPKKGMQYIPTITNYTKLWWVPNVVVAHQKEGIEAIHLPTGRTLCKLSLLEGGLHADINGDGVLDHVQTVGGNVGERTVVSGSMEVLKPCWAVATSGVPIREQLFNVSICHHSPFNFLHYGGDYSRHFAQARDTSTLEIATPILIPRDDGHKHRKGSHGDVIFLTNRGEVTSYTPDVHGHDAVWQWQLQTEATWSNLPSPSGLTESGTVVPTLKPFSLRIHDNQPMILAGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIVMTSNGVYGFVQTRQPGALFFSSLVGCLLVVMAVIFVTQHLNSIQGKPRPSSSF