Information report for AT3G50990
Gene Details
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Functional Descriptions
- PO:0020023 — plant ovule outer integument — integumento externo (Spanish, exact), 外珠皮 (Japanese, exact), Poaceae outer integument (narrow)
- GO:0006979 — involved in — response to oxidative stress
- GO:0009505 — located in — plant-type cell wall
- GO:0004601 — enables — peroxidase activity
- GO:0080001 — involved in — mucilage extrusion from seed coat
- GO:0005576 — located in — extracellular region
- GO:0080001 — acts upstream of or within — mucilage extrusion from seed coat
- GO:0020037 — enables — heme binding
- GO:0044347 — acts upstream of or within — cell wall polysaccharide catabolic process
- GO:0009827 — acts upstream of or within — plant-type cell wall modification
Functional Keywords
Literature and News
- Structural diversity and transcription of class III peroxidases from Arabidopsis thaliana. DOI: 10.1046/j.1432-1033.2002.03311.x ; PMID: 12473102
- Expression analysis of the Arabidopsis peroxidase multigenic family. DOI: 10.1016/j.phytochem.2004.04.017 ; PMID: 15231406
- Differential SAGE analysis in Arabidopsis uncovers increased transcriptome complexity in response to low temperature. DOI: 10.1186/1471-2164-9-434 ; PMID: 18808718
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Expression of PRX36, PMEI6 and SBT1.7 is controlled by complex transcription factor regulatory networks for proper seed coat mucilage extrusion. DOI: 10.4161/15592324.2014.977734 ; PMID: 25531128
- Starting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell walls. DOI: 10.3390/ijms16023452 ; PMID: 25658798
- Root avoidance of toxic metals requires the GeBP-LIKE 4 transcription factor in Arabidopsis thaliana. DOI: 10.1111/nph.14242 ; PMID: 27768815
- Identification and Characterization of Arabidopsis Seed Coat Mucilage Proteins. DOI: 10.1104/pp.16.01600 ; PMID: 28003327
- Assessing the utility of seed coat-specific promoters to engineer cell wall polysaccharide composition of mucilage. DOI: 10.1007/s11103-019-00909-8 ; PMID: 31422517
- The Genetic Control of SEEDSTICK and LEUNIG-HOMOLOG in Seed and Fruit Development: New Insights into Cell Wall Control. DOI: 10.3390/plants11223146 ; PMID: 36432874
Gene Resources
Homologs
- Lactuca sativa Lsat_1_v5_gn_3_91640
- Oryza sativa OsPOX1;ddOs319, POXGX9;prx112, POX3006;prx114, POX8.1;prx110, POXA;prx126, POXN;prx38, POX22.3, POX5.1;prx113, OsPrx30
- Panicum virgatum Pavir.5NG033000
Sequences
cDNA Sequence
- >AT3G50990.1
AATAATCGCTGAGAGTCCAAATGAATACAAAAACGGTGAAGTCAATGGCGGGCATTGTTCTCTCTCAAATCTCACTTGTTGCGCTGTTTCCTCTATGTATTTGTTATCAAACACATCAAAGCACGAGCTCTGTAGCCTCTCTATCCCCTCAGTTTTACGAGAACTCGTGCCCAAACGCACAAGCCATCGTTCAATCTTACGTCGCCAATGCATACTTCAATGACCCTCGCATGGCTGCCTCAATTCTTAGGCTCCATTTCCACGACTGTTTCGTCAATGGATGTGATGCTTCCGTACTATTGGACAGTAGTGGAACCATGGAAAGCGAGAAACGATCAAATGCAAATCGAGACTCTGCTCGAGGGTTCGAAGTCATTGACGAGATCAAGTCTGCCTTGGAAAATGAATGTCCTGAAACAGTTTCTTGCGCCGATCTATTGGCTCTCGTTGCTAGAGACTCTATTGTTATTTGTGGTGGACCTAGTTGGGAAGTATATCTTGGAAGAAGAGATGCAAGAGAAGCAAGCTTGATTGGTTCCATGGAAAACATTCCTTCTCCCGAGTCCACGTTACAAACAATTCTCACTATGTTCAACTTTCAAGGACTTGATCTCACCGATCTTGTTGCCCTCTTAGGGAGTCACACGATAGGAAACTCAAGGTGTATTGGTTTCCGACAAAGGTTATACAACCATACTGGAAACAACGATCCCGACCAGACTTTGAATCAAGACTACGCCTCTATGTTGCAGCAGGGATGTCCGATTTCGGGCAACGACCAGAACCTCTTTAATCTTGACTATGTGACGCCGACTAAGTTTGACAATTACTACTACAAGAATCTTGTGAACTTTAGAGGACTCTTGAGTTCTGATGAGATATTGTTCACGCAAAGCATAGAGACTATGGAGATGGTCAAGTATTACGCGGAGAATGAGGGAGCGTTCTTTGAGCAGTTTGCGAAGTCGATGGTGAAGATGGGGAACATCTCACCGTTGACGGGGACGGATGGTGAGATCCGGAGGATATGCCGGAGGGTTAACCATGATGTTTGAGAGAGTTTCCATTATTGGATAGTTAAAAGTCCTAAGCGTTTGGTTAACGACTTAACGTTAATCTTTTTTTTTTTTTGTTAAATTTGATTTCTGTTGCCATTGTGTTTAATTTATTTTTATTTGTTCTAATTAATTTATGAGTTTGGTGATTGTATGGTATACCAAAACGTCAAAAACATAACGATTTTTATGGCAACTGAAATTGC
CDS Sequence
- >AT3G50990.1
ATGAATACAAAAACGGTGAAGTCAATGGCGGGCATTGTTCTCTCTCAAATCTCACTTGTTGCGCTGTTTCCTCTATGTATTTGTTATCAAACACATCAAAGCACGAGCTCTGTAGCCTCTCTATCCCCTCAGTTTTACGAGAACTCGTGCCCAAACGCACAAGCCATCGTTCAATCTTACGTCGCCAATGCATACTTCAATGACCCTCGCATGGCTGCCTCAATTCTTAGGCTCCATTTCCACGACTGTTTCGTCAATGGATGTGATGCTTCCGTACTATTGGACAGTAGTGGAACCATGGAAAGCGAGAAACGATCAAATGCAAATCGAGACTCTGCTCGAGGGTTCGAAGTCATTGACGAGATCAAGTCTGCCTTGGAAAATGAATGTCCTGAAACAGTTTCTTGCGCCGATCTATTGGCTCTCGTTGCTAGAGACTCTATTGTTATTTGTGGTGGACCTAGTTGGGAAGTATATCTTGGAAGAAGAGATGCAAGAGAAGCAAGCTTGATTGGTTCCATGGAAAACATTCCTTCTCCCGAGTCCACGTTACAAACAATTCTCACTATGTTCAACTTTCAAGGACTTGATCTCACCGATCTTGTTGCCCTCTTAGGGAGTCACACGATAGGAAACTCAAGGTGTATTGGTTTCCGACAAAGGTTATACAACCATACTGGAAACAACGATCCCGACCAGACTTTGAATCAAGACTACGCCTCTATGTTGCAGCAGGGATGTCCGATTTCGGGCAACGACCAGAACCTCTTTAATCTTGACTATGTGACGCCGACTAAGTTTGACAATTACTACTACAAGAATCTTGTGAACTTTAGAGGACTCTTGAGTTCTGATGAGATATTGTTCACGCAAAGCATAGAGACTATGGAGATGGTCAAGTATTACGCGGAGAATGAGGGAGCGTTCTTTGAGCAGTTTGCGAAGTCGATGGTGAAGATGGGGAACATCTCACCGTTGACGGGGACGGATGGTGAGATCCGGAGGATATGCCGGAGGGTTAACCATGATGTTTGA
Protein Sequence
- >AT3G50990.1
MNTKTVKSMAGIVLSQISLVALFPLCICYQTHQSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVNHDV