Information report for AT3G50960
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0000911 — acts upstream of — cytokinesis by cell plate formation
- GO:0048487 — enables — beta-tubulin binding
- GO:0051211 — acts upstream of — anisotropic cell growth
- GO:0000280 — acts upstream of — nuclear division
- GO:0043622 — involved in — cortical microtubule organization
- GO:0005634 — located in — nucleus
- GO:0005737 — located in — cytoplasm
- GO:0005737 — is active in — cytoplasm
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. DOI: 10.1111/j.1365-313X.2004.02100.x ; PMID: 15165189
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Phosducin-Like Protein 3 is required for microtubule-dependent steps of cell division but not for meristem growth in Arabidopsis. DOI: 10.1105/tpc.107.057737 ; PMID: 18390592
Gene Resources
- UniProt: A0A178VB62
- EMBL: CACRSJ010000106, LR881468, LUHQ01000003
- AlphaFoldDB: A0A178VB62
- EnsemblPlants: AT3G50960.1, AT3G50960.2
- Gramene: AT3G50960.1, AT3G50960.2
- KEGG: ath:AT3G50960
- Orthologous matrix: AITTECC
- ExpressionAtlas: AT3G50960
- InterPro: IPR013766, IPR036249
- PANTHER: PTHR21148
- SUPFAM: SSF52833
- Gene3D: 3.40.30.10
- SWISS-MODEL: A0A178VB62
- Conserved Domain Database: cd02989
Homologs
- Gossypium barbadense Gobar.D12G067000
- Gossypium hirsutum Gohir.A12G062700, Gohir.D12G062550
Sequences
cDNA Sequence
- >AT3G50960.1
GTTCATCTTTTGATTTTTTGAAATTGTTAGTAAAGAAAGGAAAAAAGCTTTGATTTCGATTTCTCAAGCTGTGTTTTTTTATTTTTCTTCTTCGCATCAGGAAGGAATTGAAAAAGATTTTTGGTGTTAAAAGATGGATCCAGATGCAGTCAAATCGACTCTCTCGAATCTAGCATTTGGAAATGTAATGGCGGCTGCTGCAAGAAATTATCAAAAGGAAGTTCTTGCAAATGAGAAGGCGCAAGGATCAAATCCTGTTAATGAAGAGGTTGATCTTGATGAACTTATGGATGATCCAGAGCTAGAAAGATTGCACGCAGATAGGATTGCAGCACTAAAGAGAGAGGTTGAGAAGAGAGAATCGTTTAAAAGACAAGGGCATGGTGAATATCGAGAGGTGAGTGAAGGAGATTTCTTGGGTGAAGTCACCAGGAGTGAGAAAGTGATATGTCATTTCTACCATAAGGAATTTTACCGGTGCAAGATTATGGACAAGCATCTGAAAACTCTTGCACCTAGACATGTGGACACAAAGTTCATTAAAGTGGACGCAGAGAATGCTCCTTTCTTTGTCACGAAGCTTGCAATAAAGACTTTGCCTTGCGTTGTGCTTTTCAGCAAGGGAGTTGCGATGGATAGGCTAGTTGGGTTCCAGGATCTGGGAACCAAGGACGATTTCACAACGAATAAACTAGAGAACGTTCTTCTTAAAAAGGGAATGCTCAGCAAGAAGAAGAAAGAGGAAGATGATGAAGACGCCGAATATCAAGAGAGCATACGGAGGTCTGTTAGGTCTTCAGAGAATCTGGACTCTGATTCTGACTGATCAAGCAGTTGACATCAAAGATCTGCCATTGCTGCTAGTCTCTGTTTTCCCTTTTTGCTCGTTTGTTATATGATTATTAGAAAAGAAAATTGCGATATGAAATCCAAACGGTCAAAGCAACATTACATTGTATCAAGGTATATGTAATACACCAACTTATTGTCACTGTTTAATAAACATTGATCTAGTTGCTT - >AT3G50960.2
GTTCATCTTTTGATTTTTTGAAATTGTTAGTAAAGAAAGGAAAAAAGCTTTGATTTCGATTTCTCAAGCTGTGTTTTTTTATTTTTCTTCTTCGCATCAGGAAGGAATTGAAAAAGATTTTTGGTGTTAAAAGATGGATCCAGATGCAGTCAAATCGACTCTCTCGAATCTAGCATTTGGAAATGTAATGGCGGCTGCTGCAAGAAATTATCAAAAGGAAGTTCTTGCAAATGAGAAGGCGCAAGGATCAAATCCTGTTAATGAAGAGGTTGATCTTGATGAACTTATGGATGATCCAGAGCTAGAAAGATTGCACGCAGATAGGATTGCAGCACTAAAGAGAGAGGTTGAGAAGAGAGAATCGTTTAAAAGACAAGGGCATGGTGAATATCGAGAGGTGAGTGAAGGAGATTTCTTGGGTGAAGTCACCAGGAGTGAGAAAGTGATATGTCATTTCTACCATAAGGAATTTTACCGGTGCAAGATTATGGACAAGCATCTGAAAACTCTTGCACCTAGACATGTGGACACAAAGTTCATTAAAGTGGACGCAGAGAATGCTCCTTTCTTTGTCACGAAGCTTGCAATAAAGACTTTGCCTTGCGTTGTGCTTTTCAGCAAGGGAGTTGCGATGGATAGGCTAGTTGGGTTCCAGGATCTGGGAACCAAGGACGATTTCACAACGAATAAACTAGAGAACGTTCTTCTTAAAAAGGGAATGCTCAGCAAGAAGAAGAAAGAGGAAGATGATGAAGACGCCGAATATCAAGAGAGCATACGGAGGTCTGTTAGGTCTTCAGAGAATCTGGACTCTGATTCTGACTGATCAAGCAGTTGACATCAAAGATCTGCCATTGCTGCTAGTCTCTGTTTTCCCTTTTTGCTCGTTTGTTATATGATTATTAGAAAAGAAAATTGCGATATGAAATCCAAACGGTCAAAGCAACATTACATTGTATCAAGGTATATGTAATACACCAACTTATTGTCACTGTTTAATAAACATTGATCTAGTTGCTT
CDS Sequence
- >AT3G50960.1
ATGGATCCAGATGCAGTCAAATCGACTCTCTCGAATCTAGCATTTGGAAATGTAATGGCGGCTGCTGCAAGAAATTATCAAAAGGAAGTTCTTGCAAATGAGAAGGCGCAAGGATCAAATCCTGTTAATGAAGAGGTTGATCTTGATGAACTTATGGATGATCCAGAGCTAGAAAGATTGCACGCAGATAGGATTGCAGCACTAAAGAGAGAGGTTGAGAAGAGAGAATCGTTTAAAAGACAAGGGCATGGTGAATATCGAGAGGTGAGTGAAGGAGATTTCTTGGGTGAAGTCACCAGGAGTGAGAAAGTGATATGTCATTTCTACCATAAGGAATTTTACCGGTGCAAGATTATGGACAAGCATCTGAAAACTCTTGCACCTAGACATGTGGACACAAAGTTCATTAAAGTGGACGCAGAGAATGCTCCTTTCTTTGTCACGAAGCTTGCAATAAAGACTTTGCCTTGCGTTGTGCTTTTCAGCAAGGGAGTTGCGATGGATAGGCTAGTTGGGTTCCAGGATCTGGGAACCAAGGACGATTTCACAACGAATAAACTAGAGAACGTTCTTCTTAAAAAGGGAATGCTCAGCAAGAAGAAGAAAGAGGAAGATGATGAAGACGCCGAATATCAAGAGAGCATACGGAGGTCTGTTAGGTCTTCAGAGAATCTGGACTCTGATTCTGACTGA - >AT3G50960.2
ATGGATCCAGATGCAGTCAAATCGACTCTCTCGAATCTAGCATTTGGAAATGTAATGGCGGCTGCTGCAAGAAATTATCAAAAGGAAGTTCTTGCAAATGAGAAGGCGCAAGGATCAAATCCTGTTAATGAAGAGGTTGATCTTGATGAACTTATGGATGATCCAGAGCTAGAAAGATTGCACGCAGATAGGATTGCAGCACTAAAGAGAGAGGTTGAGAAGAGAGAATCGTTTAAAAGACAAGGGCATGGTGAATATCGAGAGGTGAGTGAAGGAGATTTCTTGGGTGAAGTCACCAGGAGTGAGAAAGTGATATGTCATTTCTACCATAAGGAATTTTACCGGTGCAAGATTATGGACAAGCATCTGAAAACTCTTGCACCTAGACATGTGGACACAAAGTTCATTAAAGTGGACGCAGAGAATGCTCCTTTCTTTGTCACGAAGCTTGCAATAAAGACTTTGCCTTGCGTTGTGCTTTTCAGCAAGGGAGTTGCGATGGATAGGCTAGTTGGGTTCCAGGATCTGGGAACCAAGGACGATTTCACAACGAATAAACTAGAGAACGTTCTTCTTAAAAAGGGAATGCTCAGCAAGAAGAAGAAAGAGGAAGATGATGAAGACGCCGAATATCAAGAGAGCATACGGAGGTCTGTTAGGTCTTCAGAGAATCTGGACTCTGATTCTGACTGA
Protein Sequence
- >AT3G50960.1
MDPDAVKSTLSNLAFGNVMAAAARNYQKEVLANEKAQGSNPVNEEVDLDELMDDPELERLHADRIAALKREVEKRESFKRQGHGEYREVSEGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTLAPRHVDTKFIKVDAENAPFFVTKLAIKTLPCVVLFSKGVAMDRLVGFQDLGTKDDFTTNKLENVLLKKGMLSKKKKEEDDEDAEYQESIRRSVRSSENLDSDSD - >AT3G50960.2
MDPDAVKSTLSNLAFGNVMAAAARNYQKEVLANEKAQGSNPVNEEVDLDELMDDPELERLHADRIAALKREVEKRESFKRQGHGEYREVSEGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTLAPRHVDTKFIKVDAENAPFFVTKLAIKTLPCVVLFSKGVAMDRLVGFQDLGTKDDFTTNKLENVLLKKGMLSKKKKEEDDEDAEYQESIRRSVRSSENLDSDSD