Information report for AT3G50870
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005515 — enables — protein binding
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0009909 — involved in — regulation of flower development
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0045892 — involved in — negative regulation of DNA-templated transcription
- GO:0042803 — enables — protein homodimerization activity
- GO:0001228 — enables — DNA-binding transcription activator activity, RNA polymerase II-specific
- GO:0009909 — acts upstream of or within — regulation of flower development
- GO:0005634 — located in — nucleus
- GO:0009908 — involved in — flower development
- GO:0048825 — involved in — cotyledon development
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0009934 — involved in — regulation of meristem structural organization
- GO:0008270 — enables — zinc ion binding
- mnp — embryo defective
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis. DOI: 10.1016/s0006-291x(02)02892-9 ; PMID: 12504119
- The GATA family of transcription factors in Arabidopsis and rice. DOI: 10.1104/pp.103.037788 ; PMID: 15084732
- HANABA TARANU is a GATA transcription factor that regulates shoot apical meristem and flower development in Arabidopsis. DOI: 10.1105/tpc.104.024869 ; PMID: 15367721
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Gene trap lines define domains of gene regulation in Arabidopsis petals and stamens. DOI: 10.1105/tpc.105.033985 ; PMID: 16055634
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. DOI: 10.1104/pp.106.090761 ; PMID: 17208962
- Differential regulation of closely related R2R3-MYB transcription factors controls flavonol accumulation in different parts of the Arabidopsis thaliana seedling. DOI: 10.1111/j.1365-313X.2007.03078.x ; PMID: 17419845
- Identification of regulatory pathways controlling gene expression of stress-responsive mitochondrial proteins in Arabidopsis. DOI: 10.1104/pp.108.121384 ; PMID: 18567827
- The GATA factor HANABA TARANU is required to position the proembryo boundary in the early Arabidopsis embryo. DOI: 10.1016/j.devcel.2010.06.004 ; PMID: 20643354
- Stable establishment of cotyledon identity during embryogenesis in Arabidopsis by ANGUSTIFOLIA3 and HANABA TARANU. DOI: 10.1242/dev.081547 ; PMID: 22669825
- Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain. DOI: 10.1104/pp.114.246660 ; PMID: 25077795
- HANABA TARANU (HAN) Bridges Meristem and Organ Primordia Boundaries through PINHEAD, JAGGED, BLADE-ON-PETIOLE2 and CYTOKININ OXIDASE 3 during Flower Development in Arabidopsis. DOI: 10.1371/journal.pgen.1005479 ; PMID: 26390296
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
Homologs
- Brassica napus GSBRNA2T00151338001, GSBRNA2T00109396001, GSBRNA2T00041707001, GSBRNA2T00129221001
- Brassica oleracea XP_013596593.1, XP_013603273.1
- Brassica rapa XP_009136565.1, XP_009115764.1
- Raphanus raphanistrum RrC9192_p1, RrC3451_p1, RrC1181_p3
Sequences
cDNA Sequence
- >AT3G50870.1
TTTCTGATTCTATATATAGGTGTGAGACCTTCTTCTCCATTCTACACTTCACTCCAACGTGAAACCTGCAAACTGAACTTATCTCTTCATATTTTCTTTAGCTTCTCTTAATTTTACACTTAGGGTTTTCAAACCAGTAGAGAGAGAGAGAAGTGTGTAAGAGCGATGATGCAGACTCCGTACACTACTTCAACGCAGGGGCAATATTGTCATTCTTGTGGAATGTTCCACCACCATAGCCAAAGCTGCTGCTACAACAACAACAACAACTCCAACGCCGGTTCTTACTCGATGGTCTTCTCCATGCAAAACGGTGGCGTTTTCGAGCAGAACGGTGAGGACTATCATCACTCTTCCTCCCTCGTTGACTGCACTCTCTCTCTTGGAACTCCTTCTACGAGGCTTTGTGAGGAAGATGAGAAACGTAGACGCTCTACTTCATCTGGTGCTTCTTCTTGCATCTCCAACTTTTGGGACTTGATTCACACCAAAAACAACAACTCCAAAACGGCACCGTACAATAACGTTCCTTCTTTCTCCGCTAACAAGCCAAGTCGCGGTTGTTCCGGTGGTGGTGGTGGCGGAGGAGGCGGTGGCGGAGGTGACTCTCTTCTCGCTAGACGCTGTGCCAACTGTGACACTACTTCTACTCCACTATGGAGGAATGGTCCTAGAGGCCCTAAGTCCCTATGCAACGCATGCGGCATTCGTTTCAAGAAGGAAGAGAGAAGAACTACTGCGGCTACAGGAAACACCGTCGTCGGAGCTGCACCGGTTCAAACCGACCAGTACGGGCATCACAACTCTGGCTACAATAATTACCATGCTGCCACTAATAACAACAATAATAATGGTACTCCGTGGGCTCATCACCACTCGACGCAGAGGGTTCCGTGTAATTATCCGGCAAATGAGATCAGGTTCATGGATGATTACGGCAGTGGAGTAGCAAACAACGTTGAATCCGACGGTGCTCACGGCGGTGTTCCGTTCCTTTCTTGGAGGCTTAATGTAGCGGATAGGGCAAGTCTTGTCCATGACTTTACCAGATGAAAGGAGAATAGAAAACGACGTTAGATTCTCTTAAAATTTCCATGTGGTTTAATTATGTCTAATTAAAAAAAAACCAAGAAAATATTTCTGAAAAAAATAGAAGTGTATATCGAGAGACGATGTTGATGTTTATTGATAGTGACGGTCTAACTTATGGTTTATCTATAAAGTACCGTTCTGGTCAATTTTTAAAATCATTTTCTAATATTTATTTTAAAAATATAACCTTCTTTTTATGG
CDS Sequence
- >AT3G50870.1
ATGATGCAGACTCCGTACACTACTTCAACGCAGGGGCAATATTGTCATTCTTGTGGAATGTTCCACCACCATAGCCAAAGCTGCTGCTACAACAACAACAACAACTCCAACGCCGGTTCTTACTCGATGGTCTTCTCCATGCAAAACGGTGGCGTTTTCGAGCAGAACGGTGAGGACTATCATCACTCTTCCTCCCTCGTTGACTGCACTCTCTCTCTTGGAACTCCTTCTACGAGGCTTTGTGAGGAAGATGAGAAACGTAGACGCTCTACTTCATCTGGTGCTTCTTCTTGCATCTCCAACTTTTGGGACTTGATTCACACCAAAAACAACAACTCCAAAACGGCACCGTACAATAACGTTCCTTCTTTCTCCGCTAACAAGCCAAGTCGCGGTTGTTCCGGTGGTGGTGGTGGCGGAGGAGGCGGTGGCGGAGGTGACTCTCTTCTCGCTAGACGCTGTGCCAACTGTGACACTACTTCTACTCCACTATGGAGGAATGGTCCTAGAGGCCCTAAGTCCCTATGCAACGCATGCGGCATTCGTTTCAAGAAGGAAGAGAGAAGAACTACTGCGGCTACAGGAAACACCGTCGTCGGAGCTGCACCGGTTCAAACCGACCAGTACGGGCATCACAACTCTGGCTACAATAATTACCATGCTGCCACTAATAACAACAATAATAATGGTACTCCGTGGGCTCATCACCACTCGACGCAGAGGGTTCCGTGTAATTATCCGGCAAATGAGATCAGGTTCATGGATGATTACGGCAGTGGAGTAGCAAACAACGTTGAATCCGACGGTGCTCACGGCGGTGTTCCGTTCCTTTCTTGGAGGCTTAATGTAGCGGATAGGGCAAGTCTTGTCCATGACTTTACCAGATGA
Protein Sequence
- >AT3G50870.1
MMQTPYTTSTQGQYCHSCGMFHHHSQSCCYNNNNNSNAGSYSMVFSMQNGGVFEQNGEDYHHSSSLVDCTLSLGTPSTRLCEEDEKRRRSTSSGASSCISNFWDLIHTKNNNSKTAPYNNVPSFSANKPSRGCSGGGGGGGGGGGGDSLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAATGNTVVGAAPVQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQRVPCNYPANEIRFMDDYGSGVANNVESDGAHGGVPFLSWRLNVADRASLVHDFTR