Information report for AT3G50700
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0009937 — involved in — regulation of gibberellic acid mediated signaling pathway
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — is active in — nucleus
- GO:0010336 — involved in — gibberellic acid homeostasis
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- A C2H2-type zinc finger protein, SGR5, is involved in early events of gravitropism in Arabidopsis inflorescence stems. DOI: 10.1111/j.1365-313X.2006.02807.x ; PMID: 16813575
- The maize INDETERMINATE1 flowering time regulator defines a highly conserved zinc finger protein family in higher plants. DOI: 10.1186/1471-2164-7-158 ; PMID: 16784536
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional control of tissue formation throughout root development. DOI: 10.1126/science.aad1171 ; PMID: 26494755
- Root avoidance of toxic metals requires the GeBP-LIKE 4 transcription factor in Arabidopsis thaliana. DOI: 10.1111/nph.14242 ; PMID: 27768815
- Gene Regulation via the Combination of Transcription Factors in the INDETERMINATE DOMAIN and GRAS Families. DOI: 10.3390/genes11060613 ; PMID: 32498388
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
Gene Resources
Homologs
- Brassica napus GSBRNA2T00026782001, GSBRNA2T00129185001
- Brassica oleracea XP_013599512.1
- Brassica rapa XP_009115733.1, XP_009115732.1
Sequences
cDNA Sequence
- >AT3G50700.1
CGATAAAAGAGAAAAATAATAATAATTGTGCCAATAGAGAGAAAGAGAGAGACAGAAGAAGAAAGAAAGGTTCCTTTGTCTCGGAACAACCAAAGAGCCACCACCCAAAAAAAAAAAGGTTCTTAGCTTTTTTTCTTTCTTTCACACGAAATCTCACGAGACGCCTTATTTCTTCTTCTCTGTCTCTTTCCGACGGCGTAACTCTCCGGTGGAATCTCAGCTCTCTTATCAGTAGAAGAAGTTTTGGTCTTTAAATGTAATTTTTTTGGTTTTGCTTTAAATTTCAATCGTTGTTATCAGAAAAAGTAGGTAGCAAAAAAAGAGATTTTTTACGAAAAGCAGATTGACTGGTAGCTGAAACAACGGAGGAGAATTATAGAAACGAGTAAAAAACAAAACCCTAAAGGTTGAAACTTGGTTGACGAAAAAAATGAGCTGATTTTTTTTTCTTCATTTATTTCATTCTTAACTCTTTTTCACATATTTAAGAATCAGTAAGAAACAAAAAAAAACAGAGTGAGACTAAAAAAAAAGATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGGTGAAGCAAGTGTTTCAATCTCATCCACCGGAAACCAAAACCCACTTCCAAACTCCACCGGAAAGAAGAAACGTAACCTCCCTGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATCACCAAAAACATTACTAGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTCAACTTCATCGTCGTGGACACAATTTACCATGGAAGCTTCGTCAGAAATCAAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCATCACGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCTGTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGAAAATGCGAGAAGTCATCATAGTCAGAGTAAGAAACAGAATCCTGAAATTTTGACCCGGAAAAACCCGGTACCCAACCCGGTTCCTGCTCCGGTGGATACTGAGTCTGCTAAAATCAAATCCTCCTCGACTTTAACAATTAAGCAATCAGAATCTCCAAAAACCCCTCCTGAAATCGTTCAAGAAGCTCCAAAACCGACCAGTTTAAATGTTGTTACAAGCAACGGTGTTTTCGCAGGCTTATTCGAATCTTCCTCGGCTTCTCCAAGTATATACACAACATCGTCTTCTTCGAAGAGTCTTTTCGCGTCATCTTCGTCCATTGAACCTATCTCTTTGGGTCTTTCAACAAGTCATGGATCATCCTTTCTTGGGTCAAACCGGTTCCACGCTCAGCCCGCGATGTCAGCAACCGCTTTACTTCAAAAAGCAGCTCAAATGGGAGCAGCTTCTTCAGGAGGTTCATTGCTTCACGGGTTAGGGATAGTTTCATCCACTTCAACTTCTATAGACGCAATAGTCCCTCATGGACTAGGATTAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTAAAAGAGCTTATGATGGGGAATTCATCGGTGTTTGGTCCGAAACAAACGACATTAGACTTCCTCGGTTTAGGTAGAGCGGTTGGTAACGGAAATGGTCCAAGTAACGGACTATCTACTCTAGTCGGAGGAGGAACCGGCATCGATATGGCAACAACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAATCATAAGTAGAGTAAATGAATGTGTTTGAGAGGGTTTTAGATGTTCTTGTTCAATAGGTTAGTGTGAGAATTTGAAAACTTCCCTTTGAAAGAAAGGGTTCACTATTTAATATATATGCAATTAGTTAATTATTCTGATTTACCTAATTTCGATTTCTTAAACGCAAAGAAATCTTTAGTGACGAGTGATGATGATTTACTCTTCTTATCTAATAAATTCCTTCACAAAT
CDS Sequence
- >AT3G50700.1
ATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGGTGAAGCAAGTGTTTCAATCTCATCCACCGGAAACCAAAACCCACTTCCAAACTCCACCGGAAAGAAGAAACGTAACCTCCCTGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATCACCAAAAACATTACTAGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTCAACTTCATCGTCGTGGACACAATTTACCATGGAAGCTTCGTCAGAAATCAAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCATCACGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCTGTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGAAAATGCGAGAAGTCATCATAGTCAGAGTAAGAAACAGAATCCTGAAATTTTGACCCGGAAAAACCCGGTACCCAACCCGGTTCCTGCTCCGGTGGATACTGAGTCTGCTAAAATCAAATCCTCCTCGACTTTAACAATTAAGCAATCAGAATCTCCAAAAACCCCTCCTGAAATCGTTCAAGAAGCTCCAAAACCGACCAGTTTAAATGTTGTTACAAGCAACGGTGTTTTCGCAGGCTTATTCGAATCTTCCTCGGCTTCTCCAAGTATATACACAACATCGTCTTCTTCGAAGAGTCTTTTCGCGTCATCTTCGTCCATTGAACCTATCTCTTTGGGTCTTTCAACAAGTCATGGATCATCCTTTCTTGGGTCAAACCGGTTCCACGCTCAGCCCGCGATGTCAGCAACCGCTTTACTTCAAAAAGCAGCTCAAATGGGAGCAGCTTCTTCAGGAGGTTCATTGCTTCACGGGTTAGGGATAGTTTCATCCACTTCAACTTCTATAGACGCAATAGTCCCTCATGGACTAGGATTAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTAAAAGAGCTTATGATGGGGAATTCATCGGTGTTTGGTCCGAAACAAACGACATTAGACTTCCTCGGTTTAGGTAGAGCGGTTGGTAACGGAAATGGTCCAAGTAACGGACTATCTACTCTAGTCGGAGGAGGAACCGGCATCGATATGGCAACAACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAATCATAA
Protein Sequence
- >AT3G50700.1
MPVDLDNSSTVSGEASVSISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENARSHHSQSKKQNPEILTRKNPVPNPVPAPVDTESAKIKSSSTLTIKQSESPKTPPEIVQEAPKPTSLNVVTSNGVFAGLFESSSASPSIYTTSSSSKSLFASSSSIEPISLGLSTSHGSSFLGSNRFHAQPAMSATALLQKAAQMGAASSGGSLLHGLGIVSSTSTSIDAIVPHGLGLGLPCGGESSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGNGPSNGLSTLVGGGTGIDMATTFGSGEFSGKDISRRKS