Gene Details:
- Gene ID: AT3G50480
- Gene Symbol: HR4
- Gene Name: homolog of RPW8 4
- Description: homolog of RPW8 4;(source:Araport11)
- TAIR Accession: locus:2098740
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0009610 — involved in — response to symbiotic fungus
- GO:0009753 — involved in — response to jasmonic acid
- GO:0009620 — involved in — response to fungus
- GO:0009609 — involved in — response to symbiotic bacterium
- GO:0009723 — involved in — response to ethylene
- GO:0043207 — involved in — response to external biotic stimulus
- GO:0003674 — enables — molecular_function
- GO:0009751 — involved in — response to salicylic acid
- GO:0009617 — involved in — response to bacterium
- GO:0009507 — located in — chloroplast
Function-related keywords:
- shoot axis apex , leaf lamina base , root , plant embryo , vascular leaf , stamen , sepal , flower , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- and hypoosmolarity-responsive expression of the ProDH gene encoding proline dehydrogenase in Arabidopsis. DOI: 10.1104/pp.009993 ; PMID: 12376638
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- Arabidopsis PEN3/PDR8, an ATP binding cassette transporter, contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration. DOI: 10.1105/tpc.105.038372 ; PMID: 16473969
- A comprehensive structure-function analysis of Arabidopsis SNI1 defines essential regions and transcriptional repressor activity. DOI: 10.1105/tpc.105.039677 ; PMID: 16766691
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Intraspecific genetic variations, fitness cost and benefit of RPW8, a disease resistance locus in Arabidopsis thaliana. DOI: 10.1534/genetics.107.070565 ; PMID: 17565954
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- ARGONAUTE1 and ARGONAUTE4 Regulate Gene Expression and Hypoxia Tolerance. DOI: 10.1104/pp.19.00741 ; PMID: 31358683
- Atypical Resistance Protein RPW8/HR Triggers Oligomerization of the NLR Immune Receptor RPP7 and Autoimmunity. DOI: 10.1016/j.chom.2020.01.012 ; PMID: 32101702
Sequences:
cDNA Sequence
- >AT3G50480.1
CCTAGAAAAAAAGAGAGTTGACCCGTACAATACTAAGTCTATGAATCAATCTCTTTTGTCTTCATATAATTAAAACCACACGTTAACTTGTTAAACATAAGACTATTTAATATGGTTCCATCCTTGATCCTTCCATAAACATAGATTCCTCTATATTCAGCCCCGGCTATCAGATCGTCTTCTTTATCGCTCCTCTAATTATATTCATCTCGAGAGACGAGAGCTAAAGAACTACTTCCAAAAAAATGCCGATTGCTGAGCTTGCTGTAATCAAAACAGTGGGTGGGCCTCTGATAGCGGCTGCTCTTGGAGTTGGAGCCCAAGTCATTTACGACGGCTTCAGAAAAGGAAAAGATACATCTATCATAAACCGTCTCGGCCGTACAATGGAAAGTATCAGTCCGGTGCGGGATCGAATCGGTAAGCTCAGTAATGTGGAAGGTAAACCATTTAGGGAAGTCCACGAAAGTCTTACGCGTCTCCTTGAAGATGCGAAATCTATTATTGAGAAATATTGGAAACTCAGATGGAGCAGACACGTTTGCAGGAAGTACAGGTACATCAAAAAACTCGAATCGATAGAACTTGAATTAGTAAGGGTAGCACGTGAGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGATCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCCCAGATATCTGAAAAGCATAATAAATGAATCAATATCTAAAATCTGGTGTTTTTCTCTCTTTCTTCTTCCCAACAATGATTGAAAAACTCTTTCTTGTTATGAATAAAGATGGATGCCCATTATAAGGCCCATCATCTAAGCCCATCATCTAGATGTTTCTAGGGTTTTACCCTTTCCTTGTACTCCTATATAAAGAACCCTTTATCTCAATGGAATAACACACTCATTTCTTCTA - >AT3G50480.2
CCTAGAAAAAAAGAGAGTTGACCCGTACAATACTAAGTCTATGAATCAATCTCTTTTGTCTTCATATAATTAAAACCACACGTTAACTTGTTAAACATAAGACTATTTAATATGGTTCCATCCTTGATCCTTCCATAAACATAGATTCCTCTATATTCAGCCCCGGCTATCAGATCGTCTTCTTTATCGCTCCTCTAATTATATTCATCTCGAGAGACGAGAGCTAAAGAACTACTTCCAAAAAAATGCCGATTGCTGAGCTTGCTGTAATCAAAACAGTGGGTGGGCCTCTGATAGCGGCTGCTCTTGGAGTTGGAGCCCAAGTCATTTACGACGGCTTCAGAAAAGGAAAAGATACATCTATCATAAACCGTCTCGGCCGTACAATGGAAAGTATCAGTCCGGTGCGGGATCGAATCGGTAAGCTCAGTAATGTGGAAGGTAAACCATTTAGGGAAGTCCACGAAAGTCTTACGCGTCTCCTTGAAGATGCGAAATCTATTATTGAGAAATATTGGAAACTCAGATGGAGCAGACACGTTTGCAGGAAGTACAGGTACATCAAAAAACTCGAATCGATAGAACTTGAATTAGTAAGGGTAGCACGTGAGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGATCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCCCAGATATCTGAAAAGCATAATAAATGAATCAATATCTAAAATCTGGTGTTTTTCTCTCTTTCTTCTTCCCAACAATGATTGAAAAACTCTTTCTTGTTATGAATAAAGATGGATGCCCATTATAAGGCCCATCATCTAAGCCCATCATCTAGATGTTTCTAGGGTTTTACCCTTTCCTTGTACTCCTATATAAAGAACCCTTTATCTCAATGGAATAACACACTCATTTCTTCTA
CDS Sequence
- >AT3G50480.1
ATGCCGATTGCTGAGCTTGCTGTAATCAAAACAGTGGGTGGGCCTCTGATAGCGGCTGCTCTTGGAGTTGGAGCCCAAGTCATTTACGACGGCTTCAGAAAAGGAAAAGATACATCTATCATAAACCGTCTCGGCCGTACAATGGAAAGTATCAGTCCGGTGCGGGATCGAATCGGTAAGCTCAGTAATGTGGAAGGTAAACCATTTAGGGAAGTCCACGAAAGTCTTACGCGTCTCCTTGAAGATGCGAAATCTATTATTGAGAAATATTGGAAACTCAGATGGAGCAGACACGTTTGCAGGAAGTACAGGTACATCAAAAAACTCGAATCGATAGAACTTGAATTAGTAAGGGTAGCACGTGAGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGATCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCCCAGATATCTGAAAAGCATAATAAATGA - >AT3G50480.2
ATGCCGATTGCTGAGCTTGCTGTAATCAAAACAGTGGGTGGGCCTCTGATAGCGGCTGCTCTTGGAGTTGGAGCCCAAGTCATTTACGACGGCTTCAGAAAAGGAAAAGATACATCTATCATAAACCGTCTCGGCCGTACAATGGAAAGTATCAGTCCGGTGCGGGATCGAATCGGTAAGCTCAGTAATGTGGAAGGTAAACCATTTAGGGAAGTCCACGAAAGTCTTACGCGTCTCCTTGAAGATGCGAAATCTATTATTGAGAAATATTGGAAACTCAGATGGAGCAGACACGTTTGCAGGAAGTACAGGTACATCAAAAAACTCGAATCGATAGAACTTGAATTAGTAAGGGTAGCACGTGAGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCCACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGATCGATATCAAAGAAATGAAGGCGATACAAGTCGACCAATGGACCGATATCAAAGAAATGAAGGCCCAGATATCTGAAAAGCATAATAAATGA
Protein Sequence
- >AT3G50480.1
MPIAELAVIKTVGGPLIAAALGVGAQVIYDGFRKGKDTSIINRLGRTMESISPVRDRIGKLSNVEGKPFREVHESLTRLLEDAKSIIEKYWKLRWSRHVCRKYRYIKKLESIELELVRVAREIQVHQWTDIKEMKAIQVHQWTDIKEMKAIQVDQWTDIKEMKAIQVDQWIDIKEMKAIQVDQWTDIKEMKAQISEKHNK - >AT3G50480.2
MPIAELAVIKTVGGPLIAAALGVGAQVIYDGFRKGKDTSIINRLGRTMESISPVRDRIGKLSNVEGKPFREVHESLTRLLEDAKSIIEKYWKLRWSRHVCRKYRYIKKLESIELELVRVAREIQVHQWTDIKEMKAIQVHQWTDIKEMKAIQVDQWTDIKEMKAIQVDQWIDIKEMKAIQVDQWTDIKEMKAQISEKHNK