Gene Details:
- Gene ID: AT3G50360
- Gene Symbol: ATCEN2, CEN1, CEN2, CML20
- Gene Name: centrin2, CENTRIN 1, centrin2, CALMODULIN20
- Description: centrin2;(source:Araport11)
- TAIR Accession: locus:2074780
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0005886 — located in — plasma membrane
- GO:0005737 — located in — cytoplasm
- GO:0005814 — is active in — centriole
- GO:1901527 — acts upstream of or within — abscisic acid-activated signaling pathway involved in stomatal movement
- GO:0005509 — enables — calcium ion binding
- GO:0007099 — involved in — centriole replication
- GO:0005829 — located in — cytosol
- GO:0000278 — involved in — mitotic cell cycle
- GO:0005515 — enables — protein binding
- GO:0005813 — is active in — centrosome
Germplasm Phenotype:
- SALK_079974C — Hypersensitive to ABA, increased drought tolerance.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature:
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- CML10, a variant of calmodulin, modulates ascorbic acid synthesis. DOI: 10.1111/nph.13612 ; PMID: 26315131
- CML20, an Arabidopsis Calmodulin-like Protein, Negatively Regulates Guard Cell ABA Signaling and Drought Stress Tolerance. DOI: 10.3389/fpls.2017.00824 ; PMID: 28603528
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
- Components of nucleotide excision repair and DNA damage tolerance in Arabidopsis thaliana. DOI: 10.1002/em.20094 ; PMID: 15645454
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
Sequences:
cDNA Sequence
- >AT3G50360.1
CCGAAGAAACGATCGAAATAGTGAGAAAATAGAGAAAGTGTAGGGAACGATGAGGGAGTAAGTAACACATCTGTGTTTTGTCTGATTGTCTGATTAAGAACTACACATAGCAGATCTGTGTTTTGTTATGGGCCTTCACTATTAGGCCCATCTGACCCATATCGTTACCGCTTTTTAGTATGGAAAAGCAACAACAATGTAAAGGAAAGCAGAAACGTTAGATTTCTTTAGACGCGCAAACTGAAAGAGCTTTGATCGATCGATTTGGAGGATTCGTAGAAGATATGTCGAGTATATACAGAACTGTTTCGAGAAAAGAGAAACCGAGACGTCATCATGGATTGACGACACAGAAGAAGCAAGAGATTAAGGAAGCTTTTGAGCTATTTGACACTGATGGTTCTGGTACCATTGATGCTAAAGAGCTTAATGTTGCTATGAGGGCGCTTGGTTTTGAAATGACGGAAGAGCAAATCAACAAAATGATAGCTGATGTGGATAAAGATGGAAGTGGAGCTATAGATTTTGATGAGTTTGTTCATATGATGACTGCTAAGATTGGTGAAAGAGACACAAAAGAAGAGCTCACTAAAGCATTCCAGATCATTGATCTTGACAAAAATGGGAAGATATCTCCGGATGATATCAAACGCATGGCAAAGGACTTGGGTGAGAATTTCACTGATGCTGAGATACGAGAGATGGTTGAAGAAGCAGACCGAGACCGTGATGGTGAAGTTAACATGGATGAATTCATGAGGATGATGAGGAGAACTGCTTATGGTGGTAACTAGAAAGGTTGTTGCTGTTCTTAACGATATTTGATGAGCTCTATTATAGTTCTTTAACTGAGGCTTAATTATCTGTAATATTATTACTGAAGATACATATATCACAGTTTTAATCTATAGCTCATCTTAATGGCAAGTCTTGGTCTGTCTTTGTATCATTATAAGATGTATAAATTGGCAAAATATTCGTAGTCTTAGTGAAAAACTTTAGGAGCTCGCATTGGTTACTTCATAAGTCGTCAAGATTTGGACCTCTGCGCAC
CDS Sequence
- >AT3G50360.1
ATGTCGAGTATATACAGAACTGTTTCGAGAAAAGAGAAACCGAGACGTCATCATGGATTGACGACACAGAAGAAGCAAGAGATTAAGGAAGCTTTTGAGCTATTTGACACTGATGGTTCTGGTACCATTGATGCTAAAGAGCTTAATGTTGCTATGAGGGCGCTTGGTTTTGAAATGACGGAAGAGCAAATCAACAAAATGATAGCTGATGTGGATAAAGATGGAAGTGGAGCTATAGATTTTGATGAGTTTGTTCATATGATGACTGCTAAGATTGGTGAAAGAGACACAAAAGAAGAGCTCACTAAAGCATTCCAGATCATTGATCTTGACAAAAATGGGAAGATATCTCCGGATGATATCAAACGCATGGCAAAGGACTTGGGTGAGAATTTCACTGATGCTGAGATACGAGAGATGGTTGAAGAAGCAGACCGAGACCGTGATGGTGAAGTTAACATGGATGAATTCATGAGGATGATGAGGAGAACTGCTTATGGTGGTAACTAG
Protein Sequence
- >AT3G50360.1
MSSIYRTVSRKEKPRRHHGLTTQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMMRRTAYGGN