Gene Details:
- Gene ID: AT3G49910
- Gene Symbol: uL24z
- Gene Name: Ribosomal Protein uL24z
- Description: Translation protein SH3-like family protein;(source:Araport11)
- TAIR Accession: locus:2097415
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0022626 — located in — cytosolic ribosome
- GO:0002181 — involved in — cytoplasmic translation
- GO:0005829 — located in — cytosol
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0003735 — enables — structural constituent of ribosome
- GO:0042273 — involved in — ribosomal large subunit biogenesis
- GO:0003729 — enables — mRNA binding
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0003723 — enables — RNA binding
- GO:0005634 — located in — nucleus
- GO:0000325 — located in — plant-type vacuole
- GO:0005730 — located in — nucleolus
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Genes encoding calmodulin-binding proteins in the Arabidopsis genome. DOI: 10.1074/jbc.M111626200 ; PMID: 11782485
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- On the functions of the h subunit of eukaryotic initiation factor 3 in late stages of translation initiation. DOI: 10.1186/gb-2007-8-4-r60 ; PMID: 17439654
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. DOI: 10.1007/s12192-012-0398-3 ; PMID: 23334891
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Sequences:
cDNA Sequence
- >AT3G49910.1
GCCCATTCATAACAAAGCCCTAATATATCGAGTAAACCTAGCTCCACTCAAAACCTAACTATATAACCTTCACACACACTCATAACCTCTTCCTCATCCCCTTAAAAAACCCTAAGAGTAGAGACTCTCTCAATCCCGGCGGCGAAGATGAAGTACAACCCAAGAGTGACCTCTTCTCGCAGAAAGAACAGGAAGGCTCATTTCACAGCTTCCTCCAGCGAGAGGCGTGTGATAATGAGCTCTCCTCTCTCCACCGATCTTCGTCAGAAGTACAATGTCAGATCCATGCCGATCCGTAAAGACGACGAGGTTCAGATCGTTCGTGGTACTTACAAGGGACGTGAAGGCAAAGTTGTTCAGGTTTACCGTCGCAAATGGGTGATTCACATCGAGAGAATCACGAGGGAGAAGGTGAATGGAACAACCGTGAACGTTGGGATTCAGCCGTCGAAAGTTGTGATAACGAAGCTTCGTCTTGATAAAGATAGGAAATCGCTTTTGGAGAGGAAGGCTAAGGGACGTGCTGCTGCTGATAAGGAGAAGGGTACTAAGTTTACGTCTGAGGATGTTATGCAGAACGTTGATTAAGTAAGAAGGAAGAAGAAATCTTCTTGAAAGGTTTTATCTTTTAGAGTTATCTTCAATCGCTTTTTAATTTTCAAGTTTTGGATATTTTGGAATGTTGTCAGTGGATCTTTATGGTGCTAGACATGAGAACTTATGTTTTGATTTTGAGTATTTGAAGTTTGGTTATGGAAGTTTATCTCTTTGTCTCATTCTTTATAATGATGTGTTTGTTTGGTTTAGCTTTTGATTATGTGTTGGATGTGTGTTGAGATTGGTGTTGAACTCCTGATTTGACATAGGAGTCTTGCGTTTATCAGTCTATTGCAGTAGAATTGATGATATTGGTCATTTATGTGGTGACTTAGTTGAAATGATTCTCTAGAGTAGTGTTCTTGGTTTAGGTTATTTCGTTTGATAGTGGGGGTTCCATTTTTCGACAGTGGTTTTCATTTTTGAACATATTGGAATGACGAGTTTGTGTCTTTAAACGACATATCAATTTATCAGACCAATCCTTTCGTCTCTTCACACTTATCTCTGCAATTTTGTGTTGTCTAAGACGTTTGTGGTATAGGTTGAGTTCGAACTTGGTGGTTTTCAATTGTAATTTTTTGTTTGGCATAAGCATTACTGTGGATTTAAAAGAATTGCCACTCTGAT
CDS Sequence
- >AT3G49910.1
ATGAAGTACAACCCAAGAGTGACCTCTTCTCGCAGAAAGAACAGGAAGGCTCATTTCACAGCTTCCTCCAGCGAGAGGCGTGTGATAATGAGCTCTCCTCTCTCCACCGATCTTCGTCAGAAGTACAATGTCAGATCCATGCCGATCCGTAAAGACGACGAGGTTCAGATCGTTCGTGGTACTTACAAGGGACGTGAAGGCAAAGTTGTTCAGGTTTACCGTCGCAAATGGGTGATTCACATCGAGAGAATCACGAGGGAGAAGGTGAATGGAACAACCGTGAACGTTGGGATTCAGCCGTCGAAAGTTGTGATAACGAAGCTTCGTCTTGATAAAGATAGGAAATCGCTTTTGGAGAGGAAGGCTAAGGGACGTGCTGCTGCTGATAAGGAGAAGGGTACTAAGTTTACGTCTGAGGATGTTATGCAGAACGTTGATTAA
Protein Sequence
- >AT3G49910.1
MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKGTKFTSEDVMQNVD