Information report for AT3G49870
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0051607 — acts upstream of or within — defense response to virus
- GO:0000325 — located in — plant-type vacuole
- GO:0005737 — located in — cytoplasm
- GO:0005886 — located in — plasma membrane
- GO:0005525 — enables — GTP binding
- GO:0003924 — enables — GTPase activity
- GO:0005634 — located in — nucleus
- GO:0009506 — located in — plasmodesma
- GO:0015031 — involved in — protein transport
- GO:0005794 — located in — Golgi apparatus
Functional Keywords
Literature and News
- Analysis of the small GTPase gene superfamily of Arabidopsis. DOI: 10.1104/pp.013052 ; PMID: 12644670
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression. DOI: 10.1093/jxb/eri099 ; PMID: 15723828
- Microarray expression profiling of Arabidopsis thaliana L. in response to allelochemicals identified in buckwheat. DOI: 10.1093/jxb/ern168 ; PMID: 18603616
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M400001-MCP200 ; PMID: 15060130
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Gene Resources
- UniProt: A0A1I9LR83
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LR83
- EnsemblPlants: AT3G49870.2
- Gramene: AT3G49870.2
- ExpressionAtlas: AT3G49870
- InterPro: IPR005225, IPR006689, IPR027417
- PANTHER: PTHR45732, PTHR45732:SF17
- SUPFAM: SSF52540
- PROSITE: PS51417, PS51419
- Gene3D: 3.40.50.300
- OrthoDB: A0A1I9LR83
- SWISS-MODEL: A0A1I9LR83
- Conserved Domain Database: cd04159
Homologs
- Brassica napus GSBRNA2T00129504001, GSBRNA2T00109066001
- Cicer arietinum Ca_00017
- Citrullus lanatus Cla97C01G005310
- Daucus carota DCAR_006660
- Oryza sativa OsSar1b, OsSar1c, OsSar1a, OsSar1d, OsRab7;OsRab7B3
- Raphanus raphanistrum RrC3821_p1
- Solanum lycopersicum Solyc02g064640.3
Sequences
cDNA Sequence
- >AT3G49870.2
TTTAAATAGCAACCCCATGATTCTCGGTCTATCAACCAAAAACTTAAACAAGATCTGTACCGTTGATTTGGTATACCAGATAAAAAATCGAACGGTCCAAATTCATTGTCTTTGACTCTTTTAATTCGCCGTCACTGGACAGAGAGAGAGAGAGATATCATCGACAGAGATCAACGAGGACAAGAAGCTTCTCAGAGAGATCCGTGGAGGAGAATTCTCTCAGGCGGATCTGTTTGTCGGAGCTTTTGTGAATCATCATCATCAATGGGTTTGTTGGAAGCTTTTCTCAATTGGCTTCGTAGGTAAAGAGCCTTCCTTAAGATTTCTTCTTCTTCTTCAATTGAAATCGTGTTGCAACCAAATTACATCACCGTTATCAGCTCAATAGTATTTGAATCGTGGTCTAGTTTCTTATCGTGGGCTAGTTTTGACAAGGTTCTACAAATAAAGGCAGATTCTGTATCTTTTAGTTTTTAAAAGAGCAAACTTTAGGCATTTGGTGTGACCTTGTTTTCTTTTTAGATTGCCAATTTTAGCTATGTGTAAGAATGATAGCATCTTTAATGTGGTTTATGAAGAAACTATCGGTGTAACATCAATCTAGTTGAAAAGATGCGTTTTTTCAAGGCATGTAGAACAGCCTCTTCTTCAAGCAAGAAATGGAGCTTTCTTTGATAGGACTTCAAAATGCAGGAAAGACATCACTTGTAAATGTTGTTGCAACTGGTGGATACAGTGAAGACATGATTCCTACGGTCGGGTTTAACATGAGGAAAGTAACAAAAGGAAATGTTACAATCAAACTATGGGATCTTGGTGGTCAACCAAGATTCCGCAGCATGTGGGAACGTTACTGTCGCGCTGTTTCTGCCATTGTGTATGTAGTTGATGCTGCAGATCCTGACAACCTAAGTGTGTCGAAAAGTGAACTCCATGATTTGTTGAGCAAGACTTCGCTTAATGGTATCCCTCTTCTCGTTCTTGGGAACAAGATTGACAAACCTGGAGCTCTGTCCAAAGAAGCCTTAACAGACGAAATGGGACTTACATCACTTACAGATAGAGAAGTCTGCTGTTTCATGATATCATGCAAGAACTCTACCAACATTGATCAAGTCATTGATTGGCTCGTAAAGCATTCAAAGTCGAAGAACTAATCTTCACCAAGAACATATATTCTCTCTTCTTGATTCTTCTTAGTCTTCCTGTATTGTCTAGTTGATGATGATGGTGACAATTTTTCGTGTGAAACAAGAGTGTCTTTATTTTTCGCCTTCCGTCTCTCCTTCTTCTGCTGGTCTGGTCTTGTTTGGTCCTCCAGTCTTGTCTTTGTATATTAGATGTGGATTGTTTTTCTATTCCCAAGGCTTTGCAATTTTTGAAACACAAAAACATAAGTGTCCCAAAAAAAATTTTACTTCTGAAAATCAACGGCGTTCTGTAGGAAGAGAAATAAACTCTTAACTCTGGTTATTGTATATCTGAAATAGAAACTAGATATCGAACAAATATAAAGTAGCTAACAAAAATAAAGTAGCTACTTGCCTCAACTATCTA - >AT3G49870.1
TTTAAATAGCAACCCCATGATTCTCGGTCTATCAACCAAAAACTTAAACAAGATCTGTACCGTTGATTTGGTATACCAGATAAAAAATCGAACGGTCCAAATTCATTGTCTTTGACTCTTTTAATTCGCCGTCACTGGACAGAGAGAGAGAGAGATATCATCGACAGAGATCAACGAGGACAAGAAGCTTCTCAGAGAGATCCGTGGAGGAGAATTCTCTCAGGCGGATCTGTTTGTCGGAGCTTTTGTGAATCATCATCATCAATGGGTTTGTTGGAAGCTTTTCTCAATTGGCTTCGTAGGTAAAGAGCCTTCCTTAAGATTTCTTCTTCTTCTTCAATTGAAATCGTGTTGCAACCAAATTACATCACCGTTATCAGCTCAATAGTATTTGAATCGTGGTCTAGTTTCTTATCGTGGGCTAGTTTTGACAAGGTTCTACAAATAAAGGCAGATTCTGTATCTTTTAGTTTTTAAAAGAGCAAACTTTAGGCATTTGGTGTGACCTTGTTTTCTTTTTAGATTGCCAATTTTAGCTATGTGTAAGAATGATAGCATCTTTAATGTGGTTTATGAAGAAACTATCGGTGTAACATCAATCTAGTTGAAAAGATGCGTTTTTTCAAGGCATGTAGAACAGCCTCTTCTTCAAGCAAGAAATGGAGCTTTCTTTGATAGGACTTCAAAATGCAGGAAAGACATCACTTGTAAATGTTGTTGCAACTGGTGGATACAGTGAAGACATGATTCCTACGGTCGGGTTTAACATGAGGAAAGTAACAAAAGGAAATGTTACAATCAAACTATGGGATCTTGGTGGTCAACCAAGATTCCGCAGCATGTGGGAACGTTACTGTCGCGCTGTTTCTGCCATTGTGTATGTAGTTGATGCTGCAGATCCTGACAACCTAAGTGTGTCGAAAAGTGAACTCCATGATTTGTTGAGCAAGACTTCGCTTAATGGTATCCCTCTTCTCGTTCTTGGGAACAAGATTGACAAACCTGGAGCTCTGTCCAAAGAAGCCTTAACAGACGAAATGGGACTTACATCACTTACAGATAGAGAAGTCTGCTGTTTCATGATATCATGCAAGAACTCTACCAACATTGATCAAGTCATTGATTGGCTCGTAAAGCATTCAAAGTCGAAGAACTAATCTTCACCAAGAACATATATTCTCTCTTCTTGATTCTTCTTAGTCTTCCTGTATTGTCTAGTTGATGATGATGGTGACAATTTTTCGTGTGAAACAAGAGTGTCTTTATTTTTCGCCTTCCGTCTCTCCTTCTTCTGCTGGTCTGGTCTTGTTTGGTCCTCCAGTCTTGTCTTTGTATATTAGATGTGGATTGTTTTTCTATTCCCAAGGCTTTGCAATTTTTGAAACACAAAAACATAAGTGTCCCAAAAAAAATTTTACTTCTGAAAATCAACGGCGTTCTGTAGGAAGAGAAATAAACTCTTAACTCTGGTTATTGTATATCTGAAATAGAAACTAGATATCGAACAAATATAAAGTAGCTAACAAAAATAAAGTAGCTACTTGCCTCAACTATCTA
CDS Sequence
- >AT3G49870.2
ATGGAGCTTTCTTTGATAGGACTTCAAAATGCAGGAAAGACATCACTTGTAAATGTTGTTGCAACTGGTGGATACAGTGAAGACATGATTCCTACGGTCGGGTTTAACATGAGGAAAGTAACAAAAGGAAATGTTACAATCAAACTATGGGATCTTGGTGGTCAACCAAGATTCCGCAGCATGTGGGAACGTTACTGTCGCGCTGTTTCTGCCATTGTGTATGTAGTTGATGCTGCAGATCCTGACAACCTAAGTGTGTCGAAAAGTGAACTCCATGATTTGTTGAGCAAGACTTCGCTTAATGGTATCCCTCTTCTCGTTCTTGGGAACAAGATTGACAAACCTGGAGCTCTGTCCAAAGAAGCCTTAACAGACGAAATGGGACTTACATCACTTACAGATAGAGAAGTCTGCTGTTTCATGATATCATGCAAGAACTCTACCAACATTGATCAAGTCATTGATTGGCTCGTAAAGCATTCAAAGTCGAAGAACTAA - >AT3G49870.1
ATGGAGCTTTCTTTGATAGGACTTCAAAATGCAGGAAAGACATCACTTGTAAATGTTGTTGCAACTGGTGGATACAGTGAAGACATGATTCCTACGGTCGGGTTTAACATGAGGAAAGTAACAAAAGGAAATGTTACAATCAAACTATGGGATCTTGGTGGTCAACCAAGATTCCGCAGCATGTGGGAACGTTACTGTCGCGCTGTTTCTGCCATTGTGTATGTAGTTGATGCTGCAGATCCTGACAACCTAAGTGTGTCGAAAAGTGAACTCCATGATTTGTTGAGCAAGACTTCGCTTAATGGTATCCCTCTTCTCGTTCTTGGGAACAAGATTGACAAACCTGGAGCTCTGTCCAAAGAAGCCTTAACAGACGAAATGGGACTTACATCACTTACAGATAGAGAAGTCTGCTGTTTCATGATATCATGCAAGAACTCTACCAACATTGATCAAGTCATTGATTGGCTCGTAAAGCATTCAAAGTCGAAGAACTAA
Protein Sequence
- >AT3G49870.2
MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSKN - >AT3G49870.1
MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSKN