Information report for AT3G49840
Gene Details
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Functional Descriptions
- GO:0031965 — located in — nuclear membrane
- GO:0003674 — enables — molecular_function
- GO:0006325 — acts upstream of or within — chromatin organization
Functional Keywords
Literature and News
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Cell identity mediates the response of Arabidopsis roots to abiotic stress. DOI: 10.1126/science.1153795 ; PMID: 18436742
- The Inner Nuclear Membrane Protein Nemp1 Is a New Type of RanGTP-Binding Protein in Eukaryotes. DOI: 10.1371/journal.pone.0127271 ; PMID: 25946333
- PNET2 is a component of the plant nuclear lamina and is required for proper genome organization and activity. DOI: 10.1016/j.devcel.2021.11.002 ; PMID: 34822788
- Cell identity mediates the response of Arabidopsis roots to abiotic stress. DOI: 10.1126/science.1153795 ; PMID: 18436742
Gene Resources
- UniProt: Q0WVK0
- EMBL: AK226747, CP002686
- AlphaFoldDB: Q0WVK0
- EnsemblPlants: AT3G49840.1
- Gramene: AT3G49840.1
- ExpressionAtlas: AT3G49840
- InterPro: IPR019358
- PANTHER: PTHR31587, PTHR31587:SF4
Homologs
- Brassica napus GSBRNA2T00081584001
- Daucus carota DCAR_020655
- Musa acuminata GSMUA_Achr9P10530_001
- Oryza sativa OsDES1
Sequences
cDNA Sequence
- >AT3G49840.1
CGATTTCTTCATCCAAAAAACAAAACCCAGAAAAATCGATGAGTGACTCATCATCAGTCATTGTCCGAAGCTCAAATTTCATTGTCGTGATTCTCTTCCTCAACCTCGTCACTTTCTTCTCCCTTGTCTCCTCCAATGAACTTGTCTTTGCTGTGGGTGAAACTGGTTCACTACAAGTGACTCCAAGAACAGAGGTGATATATTCACCTGGTCTGAAACGAGGTATAACATCGATATGTGAGAGATTACATATCCATGGATTACAAAGAAGACTTGAGCACATTGATAGATATGCACATTCACTAAAGTTGACTCTTTTGAGTAATAATGCTTCCAACAGTATCGACGTTTGCTTCCACAGGAATTCGTCGCGTGCAATTGGAATGTGTCCTGATAATCAGTGGAAGAGAGTGTCCAAAGGGTTACCTTGGGTTGGGATAATGTCACCTTTTGACTATAAGATTCTTGATATAAGAACATTTGGTGGCTCATCTAATGTCAGCACCGTGGAGTTGGTTGCTAAACAAGAGTTTTTCATATACCGGATTGTGTTTTTAATCATGGGGATAGTGTTACTGAGTTTGGCTTCTAGACTTAGCAAATCAGTTGCGTTTTACTATATCGGTGCAATGTCTATTGGGATTGTCATTCTTGTAACTCTTATCATTAATCAGGGGATAAAGCGTCTACCAACTAGAGGGAAGAGTCGTTTTCAGTTATTTTTCTACTCGTCTATGATTGGTGTGGGAGGTTACTTTCTTCAATACATACGCGGTTTAGTTCAAGATTTGCTAATGCAGATAGAAATCAGTGAAGATTTGTACATCCCTCTGGCGATTCTTTTGGTTGTGTTTGTATTTATGTTGGGAGCGTGGTCAGGATTTTGGACTGTCAAGAAATTTGTTGTGACAAAAGATGGTTCTGTTGACATTAGTACATCAATCTTTGTCTCTTGGTCCATCCGAGCTTTTGCTGTGGCTCTGATCCTTCAGAGCTCTTTAGATCCATTACTTGCTGGAGGAGCGTTGATAACTGGAATTCTCATCTCATTGATTCTAAAGAGTATTAGCAGAAAGCTGTTAGCTCAAAGAATATATGAGCAAGATGATGAAACTGAGAGTTGTAGCCCCGGCTTGATCCATGCTACCTCGTTTGCTTCTCCTCTTCCTAGAGGTTCCAACAAGAAGTTGAGGACAGTACCATTATCTGAGTCAGATATCTTTCCTTCTTCATTCCACAAAACACCAGAAGGGAGAAGGAAGCTAACGAAGGAAGAGTTGCAAAAATTCACTAAAGAGAGCACGGAAAATGCATTGAAGGAATTGGTTTCTTCACCTGGTTTTGGCGAATGGGCGGTGAAAAATGCTAAAAGAATCACTGTAAATCCGATAAAGGAATCGTCAAGTAAATAGGGTGATACTGTTAAGCGCAGAAGAAGGTTCCTCTGGTTCTGAAAAGCAAGCAGCTAGGGGAACTTCTGAACCAGTCGGAGAGTGTAGTAGGTTGCTTGTGAACAAAGCAACAAGCCTTGCTTATATATAGTCTTCTGGAAAAGAACTAATGAGCAAGGCGAAAAAGTTGAGAGATTAACTTCTAAATCAACAAAATGTAACCTTTGACATAAATTGATATTGACCAATAAGATCATACGTTTCCATGTGTGTAGTCATCAATGATGTGAAACTCAATACTATAGTGTATTTTATTTGAATGGACGATGATAGTTGGTATAATAAAGGAGGAAATAAATAAAGTCATCTTTTTGTTA - >AT3G49840.2
CGATTTCTTCATCCAAAAAACAAAACCCAGAAAAATCGATGAGTGACTCATCATCAGTCATTGTCCGAAGCTCAAATTTCATTGTCGTGATTCTCTTCCTCAACCTCGTCACTTTCTTCTCCCTTGTCTCCTCCAATGAACTTGTCTTTGCTGTGGGTGAAACTGGTTCACTACAAGTGACTCCAAGAACAGAGGTGATATATTCACCTGGTCTGAAACGAGGTATAACATCGATATGTGAGAGATTACATATCCATGGATTACAAAGAAGACTTGAGCACATTGATAGATATGCACATTCACTAAAGTTGACTCTTTTGAGTAATAATGCTTCCAACAGTATCGACGTTTGCTTCCACAGGAATTCGTCGCGTGCAATTGGAATGTGTCCTGATAATCAGTGGAAGAGAGTGTCCAAAGGGTTACCTTGGGTTGGGATAATGTCACCTTTTGACTATAAGATTCTTGATATAAGAACATTTGGTGGCTCATCTAATGTCAGCACCGTGGAGTTGGTTGCTAAACAAGAGTTTTTCATATACCGGATTGTGTTTTTAATCATGGGGATAGTGTTACTGAGTTTGGCTTCTAGACTTAGCAAATCAGTTGCGTTTTACTATATCGGTGCAATGTCTATTGGGATTGTCATTCTTGTAACTCTTATCATTAATCAGGGGATAAAGCGTCTACCAACTAGAGGGAAGAGTCGTTTTCAGTTATTTTTCTACTCGTCTATGATTGGTGTGGGAGGTTACTTTCTTCAATACATACGCGGTTTAGTTCAAGATTTGCTAATGCAGATAGAAATCAGTGAAGATTTGTACATCCCTCTGGCGATTCTTTTGGTTGTGTTTGTATTTATGTTGGGAGCGTGGTCAGGATTTTGGACTGTCAAGAAATTTGTTGTGACAAAAGATGGTTCTGTTGACATTAGTACATCAATCTTTGTCTCTTGGTCCATCCGAGCTTTTGCTGTGGCTCTGATCCTTCAGAGCTCTTTAGATCCATTACTTGCTGGAGGAGCGTTGATAACTGGAATTCTCATCTCATTGATTCTAAAGAGTATTAGCAGAAAGCTGTTAGCTCAAAGAATATATGAGCAAGATGATGAAACTGAGAGTTGTAGCCCCGGCTTGATCCATGCTACCTCGTTTGCTTCTCCTCTTCCTAGAGGTTCCAACAAGAAGTTGAGGACAGTACCATTATCTGAGTCAGATATCTTTCCTTCTTCATTCCACAAAACACCAGAAGGGAGAAGGAAGCTAACGAAGGAAGAGTTGCAAAAATTCACTAAAGAGAGCACGGAAAATGCATTGAAGGAATTGGTTTCTTCACCTGGTTTTGGCGAATGGGCGGTGAAAAATGCTAAAAGAATCACTGTAAATCCGATAAAGGAATCGTCAAGTAAATAGGGTGATACTGTTAAGCGCAGAAGAAGGTTCCTCTGGTTCTGAAAAGCAAGCAGCTAGGGGAACTTCTGAACCAGTCGGAGAGTGTAGTAGGTTGCTTGTGAACAAAGCAACAAGCCTTGCTTATATATAGTCTTCTGGAAAAGAACTAATGAGCAAGGCGAAAAAGTTGAGAGATTAACTTCTAAATCAACAAAATGTAACCTTTGACATAAATTGATATTGACCAATAAGATCATACGTTTCCATGTGTGTAGTCATCAATGATGTGAAACTCAATACTATAGTGTATTTTATTTGAATGGACGATGATAGTTGGTATAATAAAGGAGGAAATAAATAAAGTCATCTTTTTGTTA
CDS Sequence
- >AT3G49840.1
ATGAGTGACTCATCATCAGTCATTGTCCGAAGCTCAAATTTCATTGTCGTGATTCTCTTCCTCAACCTCGTCACTTTCTTCTCCCTTGTCTCCTCCAATGAACTTGTCTTTGCTGTGGGTGAAACTGGTTCACTACAAGTGACTCCAAGAACAGAGGTGATATATTCACCTGGTCTGAAACGAGGTATAACATCGATATGTGAGAGATTACATATCCATGGATTACAAAGAAGACTTGAGCACATTGATAGATATGCACATTCACTAAAGTTGACTCTTTTGAGTAATAATGCTTCCAACAGTATCGACGTTTGCTTCCACAGGAATTCGTCGCGTGCAATTGGAATGTGTCCTGATAATCAGTGGAAGAGAGTGTCCAAAGGGTTACCTTGGGTTGGGATAATGTCACCTTTTGACTATAAGATTCTTGATATAAGAACATTTGGTGGCTCATCTAATGTCAGCACCGTGGAGTTGGTTGCTAAACAAGAGTTTTTCATATACCGGATTGTGTTTTTAATCATGGGGATAGTGTTACTGAGTTTGGCTTCTAGACTTAGCAAATCAGTTGCGTTTTACTATATCGGTGCAATGTCTATTGGGATTGTCATTCTTGTAACTCTTATCATTAATCAGGGGATAAAGCGTCTACCAACTAGAGGGAAGAGTCGTTTTCAGTTATTTTTCTACTCGTCTATGATTGGTGTGGGAGGTTACTTTCTTCAATACATACGCGGTTTAGTTCAAGATTTGCTAATGCAGATAGAAATCAGTGAAGATTTGTACATCCCTCTGGCGATTCTTTTGGTTGTGTTTGTATTTATGTTGGGAGCGTGGTCAGGATTTTGGACTGTCAAGAAATTTGTTGTGACAAAAGATGGTTCTGTTGACATTAGTACATCAATCTTTGTCTCTTGGTCCATCCGAGCTTTTGCTGTGGCTCTGATCCTTCAGAGCTCTTTAGATCCATTACTTGCTGGAGGAGCGTTGATAACTGGAATTCTCATCTCATTGATTCTAAAGAGTATTAGCAGAAAGCTGTTAGCTCAAAGAATATATGAGCAAGATGATGAAACTGAGAGTTGTAGCCCCGGCTTGATCCATGCTACCTCGTTTGCTTCTCCTCTTCCTAGAGGTTCCAACAAGAAGTTGAGGACAGTACCATTATCTGAGTCAGATATCTTTCCTTCTTCATTCCACAAAACACCAGAAGGGAGAAGGAAGCTAACGAAGGAAGAGTTGCAAAAATTCACTAAAGAGAGCACGGAAAATGCATTGAAGGAATTGGTTTCTTCACCTGGTTTTGGCGAATGGGCGGTGAAAAATGCTAAAAGAATCACTGTAAATCCGATAAAGGAATCGTCAAGTAAATAG - >AT3G49840.2
ATGAGTGACTCATCATCAGTCATTGTCCGAAGCTCAAATTTCATTGTCGTGATTCTCTTCCTCAACCTCGTCACTTTCTTCTCCCTTGTCTCCTCCAATGAACTTGTCTTTGCTGTGGGTGAAACTGGTTCACTACAAGTGACTCCAAGAACAGAGGTGATATATTCACCTGGTCTGAAACGAGGTATAACATCGATATGTGAGAGATTACATATCCATGGATTACAAAGAAGACTTGAGCACATTGATAGATATGCACATTCACTAAAGTTGACTCTTTTGAGTAATAATGCTTCCAACAGTATCGACGTTTGCTTCCACAGGAATTCGTCGCGTGCAATTGGAATGTGTCCTGATAATCAGTGGAAGAGAGTGTCCAAAGGGTTACCTTGGGTTGGGATAATGTCACCTTTTGACTATAAGATTCTTGATATAAGAACATTTGGTGGCTCATCTAATGTCAGCACCGTGGAGTTGGTTGCTAAACAAGAGTTTTTCATATACCGGATTGTGTTTTTAATCATGGGGATAGTGTTACTGAGTTTGGCTTCTAGACTTAGCAAATCAGTTGCGTTTTACTATATCGGTGCAATGTCTATTGGGATTGTCATTCTTGTAACTCTTATCATTAATCAGGGGATAAAGCGTCTACCAACTAGAGGGAAGAGTCGTTTTCAGTTATTTTTCTACTCGTCTATGATTGGTGTGGGAGGTTACTTTCTTCAATACATACGCGGTTTAGTTCAAGATTTGCTAATGCAGATAGAAATCAGTGAAGATTTGTACATCCCTCTGGCGATTCTTTTGGTTGTGTTTGTATTTATGTTGGGAGCGTGGTCAGGATTTTGGACTGTCAAGAAATTTGTTGTGACAAAAGATGGTTCTGTTGACATTAGTACATCAATCTTTGTCTCTTGGTCCATCCGAGCTTTTGCTGTGGCTCTGATCCTTCAGAGCTCTTTAGATCCATTACTTGCTGGAGGAGCGTTGATAACTGGAATTCTCATCTCATTGATTCTAAAGAGTATTAGCAGAAAGCTGTTAGCTCAAAGAATATATGAGCAAGATGATGAAACTGAGAGTTGTAGCCCCGGCTTGATCCATGCTACCTCGTTTGCTTCTCCTCTTCCTAGAGGTTCCAACAAGAAGTTGAGGACAGTACCATTATCTGAGTCAGATATCTTTCCTTCTTCATTCCACAAAACACCAGAAGGGAGAAGGAAGCTAACGAAGGAAGAGTTGCAAAAATTCACTAAAGAGAGCACGGAAAATGCATTGAAGGAATTGGTTTCTTCACCTGGTTTTGGCGAATGGGCGGTGAAAAATGCTAAAAGAATCACTGTAAATCCGATAAAGGAATCGTCAAGTAAATAG
Protein Sequence
- >AT3G49840.1
MSDSSSVIVRSSNFIVVILFLNLVTFFSLVSSNELVFAVGETGSLQVTPRTEVIYSPGLKRGITSICERLHIHGLQRRLEHIDRYAHSLKLTLLSNNASNSIDVCFHRNSSRAIGMCPDNQWKRVSKGLPWVGIMSPFDYKILDIRTFGGSSNVSTVELVAKQEFFIYRIVFLIMGIVLLSLASRLSKSVAFYYIGAMSIGIVILVTLIINQGIKRLPTRGKSRFQLFFYSSMIGVGGYFLQYIRGLVQDLLMQIEISEDLYIPLAILLVVFVFMLGAWSGFWTVKKFVVTKDGSVDISTSIFVSWSIRAFAVALILQSSLDPLLAGGALITGILISLILKSISRKLLAQRIYEQDDETESCSPGLIHATSFASPLPRGSNKKLRTVPLSESDIFPSSFHKTPEGRRKLTKEELQKFTKESTENALKELVSSPGFGEWAVKNAKRITVNPIKESSSK - >AT3G49840.2
MSDSSSVIVRSSNFIVVILFLNLVTFFSLVSSNELVFAVGETGSLQVTPRTEVIYSPGLKRGITSICERLHIHGLQRRLEHIDRYAHSLKLTLLSNNASNSIDVCFHRNSSRAIGMCPDNQWKRVSKGLPWVGIMSPFDYKILDIRTFGGSSNVSTVELVAKQEFFIYRIVFLIMGIVLLSLASRLSKSVAFYYIGAMSIGIVILVTLIINQGIKRLPTRGKSRFQLFFYSSMIGVGGYFLQYIRGLVQDLLMQIEISEDLYIPLAILLVVFVFMLGAWSGFWTVKKFVVTKDGSVDISTSIFVSWSIRAFAVALILQSSLDPLLAGGALITGILISLILKSISRKLLAQRIYEQDDETESCSPGLIHATSFASPLPRGSNKKLRTVPLSESDIFPSSFHKTPEGRRKLTKEELQKFTKESTENALKELVSSPGFGEWAVKNAKRITVNPIKESSSK