Gene Details:
- Gene ID: AT3G49720
- Gene Symbol: CGR2
- Gene Name:
- Description: transmembrane protein;(source:Araport11)
- TAIR Accession: locus:2097380
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0009965 — involved in — leaf morphogenesis
- GO:0005515 — enables — protein binding
- GO:0009535 — located in — chloroplast thylakoid membrane
- GO:1903942 — involved in — positive regulation of respiratory gaseous exchange
- GO:0005886 — located in — plasma membrane
- GO:0045488 — involved in — pectin metabolic process
- GO:0051512 — acts upstream of or within — positive regulation of unidimensional cell growth
- GO:0005794 — located in — Golgi apparatus
- GO:0048639 — involved in — positive regulation of developmental growth
- GO:0005829 — located in — cytosol
- GO:0045489 — acts upstream of or within — pectin biosynthetic process
- GO:0005802 — located in — trans-Golgi network
- GO:0005768 — located in — endosome
- GO:0009664 — involved in — plant-type cell wall organization
- GO:1905157 — involved in — positive regulation of photosynthesis
- GO:0005797 — located in — Golgi medial cisterna
- GO:0009832 — involved in — plant-type cell wall biogenesis
- GO:0000325 — located in — plant-type vacuole
- GO:0015976 — involved in — carbon utilization
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen , pollen tube cell , pollen , guard cell
Literature:
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Localization of organelle proteins by isotope tagging (LOPIT). DOI: 10.1074/mcp.T400009-MCP200 ; PMID: 15295017
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds. DOI: 10.1104/pp.107.096917 ; PMID: 17660356
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Label-free protein quantification for plant Golgi protein localization and abundance. DOI: 10.1104/pp.114.245589 ; PMID: 25122472
- Arabidopsis thaliana MSI4/FVE associates with members of a novel family of plant specific PWWP/RRM domain proteins. DOI: 10.1007/s11103-014-0280-z ; PMID: 25600937
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
Sequences:
cDNA Sequence
- >AT3G49720.3
AGTGATATTAACACTTCGAAGCTTCTTCTTCCTTTAGTAAATTCAAGTGTGAGGTGTGTTTATTGATAAAGTGCTCATTTTCTCGGATCTCAGATCTTAGATCCAAACCCTCATTATTTCATTGATCCAAGGTAGATTTCGATTTCTTCCTTCTTCTTCTTCCTCTTCTCGATTTGGGTTTCCTTCGTCTACCGTTCTGCGAGCTGTTTCATGGATCAATCTATCTAATAGCTTGAGCTTGCTGGGATTTTAGTTATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA - >AT3G49720.1
AGTGATATTAACACTTCGAAGCTTCTTCTTCCTTTAGTAAATTCAAGTGTGAGGTGTGTTTATTGATAAAGTGCTCATTTTCTCGGATCTCAGATCTTAGATCCAAACCCTCATTATTTCATTGATCCAAGGTAGATTTCGATTTCTTCCTTCTTCTTCTTCCTCTTCTCGATTTGGGTTTCCTTCGTCTACCGTTCTGCGAGCTGTTTCATGGATCAATCTATCTAATAGCTTGAGCTTGCTGGGATTTTAGTTATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA - >AT3G49720.2
AGTGATATTAACACTTCGAAGCTTCTTCTTCCTTTAGTAAATTCAAGTGTGAGGTGTGTTTATTGATAAAGTGCTCATTTTCTCGGATCTCAGATCTTAGATCCAAACCCTCATTATTTCATTGATCCAAGGTAGATTTCGATTTCTTCCTTCTTCTTCTTCCTCTTCTCGATTTGGGTTTCCTTCGTCTACCGTTCTGCGAGCTGTTTCATGGATCAATCTATCTAATAGCTTGAGCTTGCTGGGATTTTAGTTATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA
CDS Sequence
- >AT3G49720.3
ATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA - >AT3G49720.1
ATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA - >AT3G49720.2
ATGGCGAGACGGCAAGTAGGTTCAACAAGACGTGTTGGCGATGGTGGAAGCTTCCCTTTTGCAGGAGCTTTACACTCAAAGTCTCGATCTTCTCCACTACTATCTATTTGCCTTGTTCTTGTGGGGGCTTGTCTTCTCATTGGTTATGCTTACAGTGGTCCAGGTATATTTAAAAGTATCAAAGAAGTTAGCAAAGTTACAGGTGACTATTCTTGCACAGCAGAAGTCCAAAGAGCCATTCCTGTACTTAAGAAGGCTTATGGAGATGGCATGCGCAAAGTCTTGCATGTGGGCCCTGACACATGCTCAGTGGTTTCCAGTCTATTGAAAGAAGAAGAGACTGAAGCATGGGGTGTTGAACCATATGATATTGAGGATGCAGATTCTCACTGCAAGAGTTTTGTGAGCAAAGGTCTTGTACGTGTTGCTGATATCAAGTTTCCTCTGCCCTACCGGGCAAAATCCTTCTCTCTTGTGATTGTGTCAGATGCTCTGGATTATCTCTCACCCAAGTACCTGAACAAGACCGTTCCTGAACTCGCAAGGGTGGCTTCAGACGGTGTGGTTCTTTTTGCAGGTCTCCCTGGTCAGCAGAGAGCTAAAGTTGCTGAACTCTCTAAATTCGGCCGACCCGCTAAAATGCGTAGCGCATCGTGGTGGAACCGCTTTTTCGTCCAGACAAACTTAGAAGAAAACGATGCACCAAGCAAGAAGTTCGAACAGGCTGTTTCCAAAGGATTATACAAACCAGCCTGCCAAGTCTTCCACCTCAAGCCATTACATTAA
Protein Sequence
- >AT3G49720.3
MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLKPLH - >AT3G49720.1
MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLKPLH - >AT3G49720.2
MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSIKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLKPLH