Information report for AT3G49620
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0009267 — acts upstream of or within — cellular response to starvation
- GO:0005737 — located in — cytoplasm
- GO:0016706 — enables — 2-oxoglutarate-dependent dioxygenase activity
Functional Keywords
Literature and News
- Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspension-cultured cells of Arabidopsis. DOI: 10.1104/pp.124.3.1139 ; PMID: 11080291
- Dark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars. DOI: 10.1034/j.1399-3054.2001.1110312.x ; PMID: 11240919
- The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. DOI: 10.1016/j.molcel.2004.06.023 ; PMID: 15225555
- HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. DOI: 10.1073/pnas.0503960102 ; PMID: 15994234
- Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis. DOI: 10.1104/pp.106.078717 ; PMID: 16603662
- Transcription analysis of arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence. DOI: 10.1104/pp.106.079293 ; PMID: 16603661
- Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development. DOI: 10.1094/MPMI-19-0480 ; PMID: 16673935
- A putative Arabidopsis nucleoporin, AtNUP160, is critical for RNA export and required for plant tolerance to cold stress. DOI: 10.1128/MCB.01063-06 ; PMID: 17030626
- The plant Apolipoprotein D ortholog protects Arabidopsis against oxidative stress. DOI: 10.1186/1471-2229-8-86 ; PMID: 18671872
- Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspension-cultured cells of Arabidopsis. DOI: 10.1104/pp.124.3.1139 ; PMID: 11080291
- The AP2/ERF domain transcription factor ORA59 integrates jasmonic acid and ethylene signals in plant defense. DOI: 10.1104/pp.108.117523 ; PMID: 18467450
Gene Resources
Homologs
- Actinidia chinensis CEY00_Acc12586
- Brassica napus BnUC1, BnUC1
- Glycine max Glyma.13G259400, GmGA2OX6
- Gossypium hirsutum Gohir.D13G156300
- Juglans regia Jr12_19540
- Oryza sativa SLC1, OsF3H04g;OsSAH2, OsACO5;OsACO6
- Prunus persica PRUPE_3G075600
- Rosa chinensis RchiOBHm_Chr7g0236321
- Vitis vinifera VIT_19s0140g00120
Sequences
cDNA Sequence
- >AT3G49620.1
GGGCTGCTCCGTTTGGCCTTTAGAAATCCTAAGGGACAATTTTTAATGTGTATTTATACAAATGAGATAACCATTTATGGTAATATATCATCGCAAAGTAGTCTTTACGTACGTAAGAGCAAAGCGTTTCTATCATTTCCTTAATATTGAAATGGTGACAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAATGTGATGATTTCGACATGGCTGAGGATGCGGGGGTTGTGGAAGTAGTCGGAAAACTGGACAGGGCATGTCGGGACGTCGGATTCTTCTACGTGATTGGTCATGGAATATCGGATGATCTTATAAATAAGGTGAAAGAGATGACGCATCAGTTCTTCGAGCTTCCTTACGAGGAGAAACTTAAGATCAAGATTACTCCAACTGCTGGATACAGAGGATACCAAAGAATTGGAGTAAATTTTACGAGTGGGAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAGTTCAAGCAAGGGAAACATGGGGACATCGGAAAGGTCTTGGAAGGGCCAAACCAGTGGCCAGGAAATCCTCAAGAGTACAAAGATTTAATGGAGAAGTATATTAAGCTGTGCACAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATGCTTAGAGACCCTTTTTGGGTAATGCGTATCATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGGATGTGGAGCTCACACTGACTATGGCTTGTTGACGCTTATAAATCAAGATGATGATAAAACTGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTGGATCATTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCACACTACATAAAGTAATCAATAACTCTCCTAAATACCGTGTATGTGTTGCATTTTTCTACGAGACTAACTTCGAGGCGGAGGTAGAGCCACTTGATATCTTTAAAGAGAAGCATCCACGAAAAGAAACATCTCAAGTTGCCAAAAGAGTCGTCTATGGACAGCATCTGATTAACAAAGTCCTGACAACCTTTGCAAATTTAGTGGAAAACAGTTAATATGGTTGATGGGCTTTGGATGGTAATTGTTTTACCTAAGCATGGATTTCGAGTTTTAGTAAAATAAAAGAAGTTCTAGGCGACAATAAAAATAAATGAAGAAGAAATTGTAATTTGGTTTCTAATATTAATAAAACTACAGGTTTGTTTACCAATCGGCTAGTTTTAGTAATTTGAGTAAAAAACGATGAGATTCCTCTAGGTAGCTTCCTCTCTCACCTAGCTAGTGTTTCGTCGCTGGTTTTGGAGTTAAATAATCATTGACATTGATGTTCTTTAATTAAGAGTACCATTTTGAAGTTCGAGGTTTAAGAAACCACATTCTATCTCAAGAAATAAATCAGTGAAAACATATAAGTTACCATGCATATCATATTTAAGATGTAAT
CDS Sequence
- >AT3G49620.1
ATGGTAATATATCATCGCAAAGTAGTCTTTACGTACGTAAGAGCAAAGCGTTTCTATCATTTCCTTAATATTGAAATGGTGACAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAATGTGATGATTTCGACATGGCTGAGGATGCGGGGGTTGTGGAAGTAGTCGGAAAACTGGACAGGGCATGTCGGGACGTCGGATTCTTCTACGTGATTGGTCATGGAATATCGGATGATCTTATAAATAAGGTGAAAGAGATGACGCATCAGTTCTTCGAGCTTCCTTACGAGGAGAAACTTAAGATCAAGATTACTCCAACTGCTGGATACAGAGGATACCAAAGAATTGGAGTAAATTTTACGAGTGGGAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAGTTCAAGCAAGGGAAACATGGGGACATCGGAAAGGTCTTGGAAGGGCCAAACCAGTGGCCAGGAAATCCTCAAGAGTACAAAGATTTAATGGAGAAGTATATTAAGCTGTGCACAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATGCTTAGAGACCCTTTTTGGGTAATGCGTATCATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGGATGTGGAGCTCACACTGACTATGGCTTGTTGACGCTTATAAATCAAGATGATGATAAAACTGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTGGATCATTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCACACTACATAAAGTAATCAATAACTCTCCTAAATACCGTGTATGTGTTGCATTTTTCTACGAGACTAACTTCGAGGCGGAGGTAGAGCCACTTGATATCTTTAAAGAGAAGCATCCACGAAAAGAAACATCTCAAGTTGCCAAAAGAGTCGTCTATGGACAGCATCTGATTAACAAAGTCCTGACAACCTTTGCAAATTTAGTGGAAAACAGTTAA
Protein Sequence
- >AT3G49620.1
MVIYHRKVVFTYVRAKRFYHFLNIEMVTDFKSLLPVIDISPLLAKCDDFDMAEDAGVVEVVGKLDRACRDVGFFYVIGHGISDDLINKVKEMTHQFFELPYEEKLKIKITPTAGYRGYQRIGVNFTSGKQDMHEAIDCYREFKQGKHGDIGKVLEGPNQWPGNPQEYKDLMEKYIKLCTDLSRNILRGISLALGGSPYEFEGKMLRDPFWVMRIIGYPGVNQENVIGCGAHTDYGLLTLINQDDDKTALQVKNVDGDWIPAIPIPGSFICNIGDMLTILSNGVYQSTLHKVINNSPKYRVCVAFFYETNFEAEVEPLDIFKEKHPRKETSQVAKRVVYGQHLINKVLTTFANLVENS